Array 1 45918-46613 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JRPC02000005.1 Helicobacter apodemus strain MIT-03-7007 NODE_5_length_88716_cov_57.3886, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     45918	    36	 100.0	    30	....................................	GTATTTGTTATCGTCTTTCCTGTTATTCTA	
     45984	    36	 100.0	    30	....................................	ATATCCACTTATAACCCAATATAAAATCCC	
     46050	    36	 100.0	    30	....................................	GGAATGTTCTCTAAGCTCTTATGCCCGATA	
     46116	    36	 100.0	    30	....................................	TTAGATTTTAAAGATTTTAACTTTATCTTA	
     46182	    36	 100.0	    30	....................................	GATATTAGGTTCAATATTTATCAGTGGTCT	
     46248	    36	 100.0	    30	....................................	TGAGTGCTAGAGAGGGAATGTTTGTTTTAA	
     46314	    36	 100.0	    30	....................................	CCTCACTTAATTTTTAGAATCTGTGAGGAT	
     46380	    36	 100.0	    30	....................................	GGAGGATTTACTCTCTAAATGGGCTTATGA	
     46446	    36	 100.0	    30	....................................	TCTTTTAAAGCAGTATAATCACTGCTTTTG	
     46512	    36	 100.0	    30	....................................	TTAGCCTATAATATTTTGCACAATTATGAT	
     46578	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	 100.0	    30	GTTTTAGCCGCTTATTAAATTCTTTTATGGTAAAAT	                              	       

# Left flank :   GTCTGTTTTATTGCCTTCAAAATTTGAAGGACTGCAAAATTCACTTACGACATCTTCTACAACTTTGGCTCTTGCCTTTAAACTTCTAAATTCGTTGATAAATTCTACAATTTTATCTTTTGTTAATATGTTACCCTGATACTCCTTGCCAAGATAGGTTATAAAAAACATCATTTCACTAACGCTTATATATTGCGGTTTAAGTGCGTTTAAAATATCTAAAACATCTTGCACCACACCATCAAAAACAAAAATCCAAAGCAATACCTAAATGTCTTTGTTCATCAAAAATATCTCTTGAATGGATAAAATCCAAGCCTCTTTGTGTGATTTTTACATATCTATATTGATATTTTCTGTTTATATCACATAATTCTTTCTTTTTGCTAAATCTATCAATAAACCCCATTCTTTGCAAATTCACAAAAATAATCTTACGCATACCCATATCTGTAATACTTGCATTAAGACTTAACAAATCCTTATTAACCTTATTATTC
# Right flank :  TACACTTTCTCAATTATCGTATTTTGCGGTATTTGAAAGGCTTTAAGGGTGTAAAATATCCTAAATGAGTGATTTTTAAGAAAATCTAAGATATAATCCCACTAAAGAATTTAACAAGCGGCTAAAATAAGGAGTTTTCGGTCTCCGCAGGGTTACAATCCCTTAAAACCGAATCTACTTTAAATCTTTTTACCAATAAGTATTTTCAAACATTTTAGCGATTAAATCTTTAGAAACTTTGTCCTTATAACTTGACAATAGACTAAAAAAGCGTAAGCTGTCTTGGCGCATTAGCTTTTTCATTCTCACTTCTACTGCCTAGCAATAATCGCATATTGTCAAATTGCTTTTCAGTAAGGATTAATGCCCTAATATGCCCTTTGGGAGGCACAATCAAACCCACCTTGTCCAAATAATTATTGGCACTTGCCACGCCTTTGCAGATTCTCATATATACGCTGTATTGCAACATCATAAAGCCATCTTTGATAAGATACTTA

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCCGCTTATTAAATTCTTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.90,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0,0   Confidence: NA] 

# Array family : NA
//