Array 1 302071-304453 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMKH010000003.1 Varibaculum timonense isolate MGYG-HGUT-02421, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 302071 33 100.0 34 ................................. ATGCAATCATTCCTCGTCAACTCATCAAAAATAA 302138 33 100.0 34 ................................. ATTCAGTTCAGATGGAGAATTTAAACCTCATGAC 302205 33 100.0 34 ................................. CCCAGTGCTGATGTAAATACACTGATGCTGTCAT 302272 33 100.0 34 ................................. GCTATTTGACAATGCTGTATCTTCTACACTACTA 302339 33 100.0 35 ................................. ATACTGTAGTGCATCTTCTAATTTATCTATATCAG 302407 33 100.0 34 ................................. GTTAATGCACCTTTGGCATTGTCCATCATGGTAT 302474 33 100.0 34 ................................. CATCACTCCCAATTAACTTTAAAAAAGAAAAGGA 302541 33 100.0 34 ................................. CATTTGAGTCATACACCCTTATAAAATCATTCGT 302608 33 100.0 34 ................................. ATCTAACTCCCTCCCTATTATAAATGTTTCTTTG 302675 33 100.0 33 ................................. CTAAATGTAAGTATTATAATGGGACAAACTATG 302741 33 100.0 34 ................................. ACCACAAGGCAGAGATAATACTTTTAAAGACCTG 302808 33 100.0 34 ................................. TTATATATAGATGTATATTGGTATCAGATCTTAT 302875 33 100.0 34 ................................. AGTACACAATCGTCAAACATTGTTTTAATTTTAT 302942 33 100.0 36 ................................. TAGAGTGTGCAGGGGGATAATTTACGTTTACAAGTC 303011 33 100.0 35 ................................. CTTTAAAATTACTTAGATGAATAAAATTTAATTTG 303079 33 100.0 34 ................................. AAAAAAATATACAGGCTATGAATAGACAAATAAG 303146 33 100.0 33 ................................. CCCTAGCTCATCTATAGATATCCCCATACTTGC 303212 33 100.0 34 ................................. ATCTGATGTAAGTTGCCTTACTCCCCTAGTTTGT 303279 33 100.0 35 ................................. ACATAGAGGGCCCCATTGAGCTAGTTGCCTTACGT 303347 33 100.0 34 ................................. AGCTTGAGCCTTAGCATTATCATCTAAAGTTCTT 303414 33 100.0 34 ................................. CCATTCTTCTTTGTCAGTAAACCATGTTTCCTTG 303481 33 100.0 33 ................................. CCCTTAATTCTTTGCACCATCTTTCGCTATATC 303547 33 100.0 34 ................................. TTATTATATCAATTGATTCCTGAGCATTCTCCAA 303614 33 100.0 34 ................................. TATTAAATCCTCATGGATATTATTCTCTATACTT 303681 33 100.0 34 ................................. CCTCTATATCTCTCATATATACTACTTTTTTATC 303748 33 100.0 34 ................................. TCATTCATCTCTGCTGACGTATCTCCAAAACCTT 303815 33 100.0 35 ................................. AATCTAATCACCTCCTCCCGAATTACTTACTTCTC 303883 33 100.0 34 ................................. ACGTTAGGTGAGATTACAAGTATATCTCAAACGT 303950 33 100.0 34 ................................. TCTTTTAACACCAAGGCTTGTTCCATTCCATGAG 304017 33 100.0 35 ................................. ACTTTCAAAGTTTTTGATAATCTCAAGGCTATCTA 304085 33 100.0 35 ................................. TCTTAGCTCTTTCTGTCTAAAACAAGGTGCACATA 304153 33 100.0 33 ................................. CCCTAGCTCATCTATAGATATCCCCATACTTGC 304219 33 100.0 34 ................................. ACAATCTAAACACTCGACTAACATTATATTATTT 304286 33 100.0 34 ................................. TGGTGGCAATATGGATAGGCCAGCTTTAAATAGA 304353 33 100.0 35 ................................. TCTACAATACCATTATATGTTATTTTCATTATTAA 304421 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 36 33 100.0 34 GTCGCTTCCTTAACTGGAAGCGTGGATTGAAGT # Left flank : TATCTCCGTGGAGATTTAGATGGGTATCCACCATTTATGTGGAAGTGATAAAATGTTTGTGCTAATAACTTATGATATAAATACTACTACAAAGGAAGGACGTAAAAGATTAAGAGATGTAGCTAAGATTTGTCAGAACTATGGACAACGTGTTCAAAATTCTGTTTTTGAATGTAAAGTAGATGAGGGTCAGTTTAGGATAATTAAGTATCAATTAGATAATACAATAGATCATAAAAAAGATAGTTTAAGATTCTATAGGTTGGGAAAAAACTATGAAAAAACAGTTGAACAAATGGGACGTAATGAAACCTATAATATTGAGGAGCCATTAATTTTATAGTGCGAACTTTAAGTGGTGGGAAATAATATATGATGTTCGCACTCAAAACATATAAAAAACTATTTAAAAAGAACTTACTATAGTAAATATAATGCTAGATTTTAGAAATACTTAGTATATATTGTTATATATAGTTAAAGTGTGACTATATGTAGCT # Right flank : TTGTTTAGTCTTGCCTATATCGCTTTTACACAATCGTTGGATCTATGTCAATACTTTGGACAAAAATTTAAGTTTTCTGGTTATTTCCCGCCACCCTTGACAAACCATTCATAAATGCTTTGAAATTTTCACCCGAAGGCGACAAACTCAAAGCAAGCTATAACATTTCGCCTTCGTGGAGGGCATTGTAGCATTTATTCATTAGTTTATCAAGGGCAAGCCCTGCGGGTGGCTAGTGTTCCCCTCAGGCTCAAAATCTAAAGCAAGCTATGATACCCTACATAAGTTTTCATATGCATCTGGGGTCATGTAATTAATTGATGAATGAATCCTTTTTCTATTATAAAATCCTTCTATATATTGAAATAATACTATACTTGCATGTTTGTAATCTATAAATGTGTTTAAATATACGCATTCTTTTTTAAGTATTGCATGAAAACTTTCTATACAAGCATTGTCATAGGGACAACCTTTAGCACTATATGATAATCTAAATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCTTAACTGGAAGCGTGGATTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 305941-306177 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMKH010000003.1 Varibaculum timonense isolate MGYG-HGUT-02421, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 305941 33 100.0 35 ................................. ATGCACTGTCAATAGATGATGAATTGCAAGAGGAC 306009 33 100.0 36 ................................. TCGTCATCGGAGTTAATGTTAGTGTTAAAAAATCTT 306078 33 100.0 34 ................................. TGATAAACTATTCAATCCCCTTAATCCAGAGGGG 306145 33 81.8 0 ..................C..T.A......TTA | ========== ====== ====== ====== ================================= ==================================== ================== 4 33 95.5 35 GTCGCTTCCTTAACTGGAAGCGTGGATTGAAGT # Left flank : TCTTGTAGCTTTTTATTTACCTTTTCCCACTTGTTTTCAGGTTTCTCTTTTTGCTTGTCATAATAGGTACTTCTTGGGTAATCTAGTACCTTACACATAGTATCTATGCTATGTGTATCAGAATTATCTTTTATTATTTCATATATATTATCAGGATTTACTTGGTGGCGAATATAGCCATAGCTTTTTTTAATATTTCATTTTCCTCCTTGAGCCTTGCATTTTCCTTTTTAATCTTTAGAATTTCTTCCAGATTTGTAGTGTTTCCTTCTACTTCAATTGGGGCTTTCTTATTTACCCAGCCTCGTATTGTGCTTTGGCTTAGGCTATATTCGTCTGCTACTTCTTTAACTGGCTTTCCTGATAATACTAATTCTGCAATCATTGTTTTAAATTCATCTGTATAAGTTTTCCTCTTAGACATTTATGGACACTTCCTTCCTTAAAGTTTAGTATATAGAAAACCTTATTTTGTGTCCATAGTTATATACTAACATCAC # Right flank : AAGAAAGGGGATATTAGTATTTGAATTTCCATGTCAATTATTCAACTTCAAAAATATACCCCAACATATTAAAAGACTTCCAAATTAGAATCAACTTATTCTAACTTGGAAGTTTCTTATATGCAGACTTTATAATTCCTTTACCATATCTATATGGGGGATAGTGTGATAGTCGAAGGGTTCACTAATGGTCTTGTAATTCAACTTATTATAAAATCCCTCTACAGAAACTCTTCCCATTAAATTTATCCTTTTATATCCTCTCTTACGAGCTATATCTTCTACATATTCCATGAGATATTTTCCCAGGCCTTTGCCGCGGTATTCTTTAAGTATGGCCACACTTTTAATTCGTGCAGTTTCTTCATCATCTTGTGTCAAAAATATGGTTGCTATCATAACGTTACCAAGATATCCACCGAACATATCCATATCCTTGTCTCCTGTTAAATCCTCATCCCTTATATCTAGGCCCCAAGGTTTCCTAAAAGCTTCATTCC # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCTTAACTGGAAGCGTGGATTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //