Array 1 41460-44966 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAQF010000002.1 Arcanobacterium phocae strain APH37 NODE_2_length_276177_cov_90.888792, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 41460 29 100.0 32 ............................. GCGGCGTGAAGCGCGATTCGAGATAGAAGAAG 41521 29 100.0 32 ............................. GGCAGCAATAACGTCGCTACCTGCGCACGCGA 41582 29 100.0 32 ............................. GAGATCGAACCGGAGAGCGTCTTTACACTGAT 41643 29 100.0 32 ............................. ACCTGGACTTTATGCGCGAGAGTATCGTTTTC 41704 29 100.0 32 ............................. TGGGATCAAAACTCCACAGCTTACGTCATCGA 41765 29 100.0 32 ............................. ATCAAACCTAGTGCATATTCTTTCCCTGATAG 41826 29 100.0 32 ............................. ATACGCCAACCTCGAGCAAGACGAACTCACTT 41887 29 100.0 32 ............................. AGCCTTGAAAATCAGCGTACAGCAGATACGAC 41948 29 100.0 32 ............................. AGTGGAACTCTCACCTTCGCTGACGCCGCTGG 42009 29 100.0 32 ............................. AATGATCTTGCGTAAGATGCCTAATTGGATGA 42070 29 100.0 33 ............................. CGACAACATAATCAGTCAATCGACCATACGAAA 42132 29 100.0 32 ............................. GAAAAGGACGTTTTTTGGTCCTTCAGCGGGGT 42193 29 100.0 32 ............................. GGAAATCTTCCTCACTCATTTCACGCAAATCT 42254 29 100.0 32 ............................. GACTAGGCAACCGGCTAAGAGTGCATATAGGG 42315 29 100.0 32 ............................. CGTAAAGCTATCGTCGCTCTCGTCGAAGGGTG 42376 29 100.0 32 ............................. ACCGGCATCACACCCTCAACCGTGACCTTGCC 42437 29 100.0 32 ............................. TACATTCAAAACGGCGCACACGACCCCGCCGG 42498 29 100.0 32 ............................. TCCCAGCCCCGAATTGTATCCTCACGAGTATC 42559 29 100.0 32 ............................. GCATCCAAACGCTGGAAGCAGATCACCGACTC 42620 29 100.0 32 ............................. ACACGACCAGCGCAGTGAAAAGGTTTGGTTTA 42681 29 100.0 32 ............................. ATAGTTTCGTCGTCGTCAAGGTCTGGGACTGG 42742 29 100.0 32 ............................. ATCAACAGTACACAAAAAGCGTTCATCGCAAG 42803 29 100.0 32 ............................. AGCTGGTTATGCGACGTTTTTGATTTTTTGTT 42864 29 100.0 32 ............................. CTTTAAGCCCTGCGCCTTGCCTATCTTGACAA 42925 29 100.0 32 ............................. GTTATTGCTCCAATTACAAGGGCTATAGGATT 42986 29 100.0 32 ............................. TCCGCCGGTTGCGTCTTCGACTGCGGCGACGT 43047 29 100.0 32 ............................. TGTATGACTGTTGCATGCTTTTTCAACCCGTT 43108 29 100.0 32 ............................. GGTGCTTGGGGTTGGCAAGCGACAAGTTTTGA 43169 29 100.0 32 ............................. AACGGTTTGATTGAGATTAAATCCCGCAAACC 43230 29 100.0 32 ............................. TAGCGTCATCTGCAAGAACATATTCATCTTTA 43291 29 100.0 32 ............................. AGGCTCTACGAGATAGCGGAAGGAGTTGGGAA 43352 29 100.0 32 ............................. GGTTCGTCCTCTATCCTGCCTGCACTACTTTT 43413 29 100.0 32 ............................. GAAAAGATCATTGAAAACCGTCCACGGCTACA 43474 29 100.0 32 ............................. TGTTCCAGTAATAAAGCTAGCTATTTCTTTGA 43535 29 100.0 32 ............................. AGCTTATATCGAGAGTCTAACTGGCGAGAACC 43596 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 43657 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 43718 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 43780 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 43841 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 43902 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 43963 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 44024 29 100.0 32 ............................. TTTTGGGTATAAAAATATCCCCTGCGCTTTTC 44085 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 44146 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 44207 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 44268 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 44329 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 44390 29 100.0 32 ............................. ACCTACTACTCGGTGTAGCCAACTTTCTAGCC 44451 29 100.0 31 ............................. TACACGGGGGAGCTTTTTGAAGCTACTCCAG 44511 29 100.0 32 ............................. AAGGTCTAATCCTTCCGCCTGGTCAAGAGGGT 44572 29 89.7 32 ..........................CTT TCTCGCATTGCTGCAAGATTTGCTGTACTTGT 44633 29 100.0 32 ............................. ACATCATGGTATGCCCTCCAAACCGTTGAAGA 44694 29 100.0 32 ............................. TTGCTGTGTAGGACGAAATCGTTGAAATGGTT 44755 29 100.0 32 ............................. GGTGGAATTAGCTGTGCGTCTTGCACTTTCGC 44816 29 100.0 32 ............................. GATAACATTGCTTTTAGCAGAGCCAGTCATCG 44877 29 96.6 32 ............................G TGCTCGCGGACATGACGTGACGCGCACCGTCG 44938 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.6 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //