Array 1 894113-892480 **** Predicted by CRISPRDetect 2.4 *** >NZ_UEND01000001.1 Streptococcus intermedius B196 strain G1563, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 894112 32 100.0 33 ................................ ACTGCTCGATTAGGGTTGTTAGGCTCTGGCAGA 894047 32 100.0 35 ................................ ACCAAAATATTATTCTCTCTTACAAGTAATTGCAG 893980 32 100.0 35 ................................ TGTGCTAAAAATCTGTTGAGTAGGCGGACTTTCCG 893913 32 100.0 34 ................................ ATCTCAATAGTGATTATAATTATACAGACACGGA 893847 32 100.0 33 ................................ AAATTCCAGCCTACTTCTCCTTGTGCGTGACGA 893782 32 100.0 35 ................................ CAGTTAATTTTTTTCATTATTTGTCTCCTTTTTCC 893715 32 100.0 37 ................................ AATCTTTAGGTGGAGATACCAATAAAGCAGCAGAAAT 893646 32 100.0 38 ................................ TAAAATACACAGAGATTCCACTAAGTATCAAACTGTTC 893576 32 100.0 36 ................................ ATCAGTTGGTTCATGAATATATAGAAACCAGAAAAA 893508 32 100.0 35 ................................ ACTTGTTTCCCTAGCTACTCCTGAAGTAGCAAGCT 893441 32 100.0 35 ................................ ATCAGCTTGTCTACCAATGCTTGAGAGAGGAAATA 893374 32 100.0 36 ................................ CCAAAAAGAGCTGGACCAAAAGCGGCAAGGACATAG 893306 32 100.0 35 ................................ ATAGCTTCTCTAAACATAGTGCCCAAGTTGTAAGT 893239 32 100.0 33 ................................ AGATGAAGCTTATTTCTATACTTTAGTCAATTA 893174 32 100.0 34 ................................ AAAAAGATGAAACGCGGCTGATTTTTGAAGCAAA 893108 32 100.0 33 ................................ ACCACTCGTCACATACCCATCTGAAAGATATTG 893043 32 100.0 34 ................................ AAAAACAGATATGATTCATGCTACTGGAGTCGTT 892977 32 100.0 36 ................................ TACTTTCTGTCTGTCGTGAAAAAATTGCGAAAGGAC 892909 32 100.0 35 ................................ AAGGTATTTGATGATTTCTTGCACCGGATTCCAAA 892842 32 100.0 34 ................................ TAGTCGAAATATCCAACTTATCTTAGCTCAAAAT 892776 32 100.0 33 ................................ TCCTTATATTTTAAACTAATAATTAACATTTCC 892711 32 100.0 35 ................................ ACAAGTTGGATAGGCTAAGCAGGTCTCAAAAAGAC 892644 32 100.0 35 ................................ TATAGCTGAAAACTTTACCATTAAGATAATTGGGT 892577 32 100.0 34 ................................ CTGAAGAGTATCGAAGTAGAATCAAACATCCACC 892511 32 90.6 0 A...............A.A............. | ========== ====== ====== ====== ================================ ====================================== ================== 25 32 99.6 35 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : CTAAAGCCATTCGTGGTGAACTGGAATCCTATCCGCCGTTTTTAATCTAGGAGTAAATTTATGATGGTTTTAATAACTTATGATGTTAATACGGAGACTGCTGCAGGTAGGAAACGTCTTCGATATGTTGCAAAACTCTGTGTTGATTACGGTCAGCGCGTACAAAATTCAGTTTTTGAATGTTCGGTAACTCCAGCGGAGTTTGTAGAAATAAAAAATAAATTGTTGACAATCATTGACCAAGAATCTGATAGCGTCCGATTTTACTTACTTGGCAAAAATTGGCAAAATCGCGTGGAAACCCTTGGTCAAGATGATAGTTATGACCCTGATGTGGGGGTATTACTTTTATAAAAACTTGTGTGCGAATCTAGGTTGCACATCAAAACCTAGAGCATTCGCGTTTTAAAACAGAAGATAATGACAAAAATCTAGTTTTTATTAAATGAAATAGCTCAATAAATTCTTATATTTAGTCACAAACGGTGCAACCATGCGCT # Right flank : TTTGATGAGTTTGTCTTTAAAAGTTTGAACGAGAAACTGTACCAAAAGTTAGGTTTGGATAAATAGCGAAGCAAACTAACATCTGAGGTCAGAGAGGTTCTAAACATACATATCTTAGGTAGAGTACTTGAAGTAATAAAATTCCCGATATTTCCAACAAAAAAACAGCTCAATAATAGAGTTGTTTTTTTTAAATTGTTAGCAAATCTAAATTTGGGGTTTGTGTTGTGTATATATCTCGATTTTTAAACTTCAAAATTATAGAGAGTGGTTGATAAGTAGCGCTCACCATTATCTGGGGCAAGAGCTAGAATTTTTTTACCTGTTCCTAATTTTTGGGCCACTTCAAGTGCAGCATAAATAGCTGCAGCAGAAGAAATACCTACCAGAAAACCTTCTTGTCCACCGATACGACGCCCAAGTTCAAGTGCTTGATCAGAAGTAACGCGGACAATGCCATCGTAAGCTTGAGTGTCTAGTGTTTCTGGGATAAAACCAGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //