Array 1 30094-31382 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYX01000019.1 Paludibacterium paludis strain KCTC 32182 sequence19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 30094 28 100.0 32 ............................ TTAAGGCCTTCCCAGGTATACACGTTCGCAGC 30154 28 100.0 32 ............................ ACAACACCCGGCGTCTCACCGTAACGCTTGAC 30214 28 100.0 32 ............................ CTTCATTCCCGATCAGATCGCGGAATGCGCTG 30274 28 100.0 32 ............................ TTTCCAGAAGGTCTTTGTTGTCCGCCACAACA 30334 28 100.0 32 ............................ TTCAGCAGCTCGGCCATGCTGCGATACTCGAC 30394 28 100.0 32 ............................ GTCGGCAATCAGGTCGCCCTGAAAGAAGTTTC 30454 28 100.0 32 ............................ ATGATGCATGCGAAGTTGTCCATGATCCGTTT 30514 28 100.0 32 ............................ TTGTGTGGACCGCCGGACTGGCCAGCTTGGGA 30574 28 100.0 32 ............................ AATACCCTATCAATTACGATTCGAAGGAACTG 30634 28 100.0 32 ............................ GCTACATCATGCTGGGGATGCTGGCTGAACAG 30694 28 100.0 32 ............................ AGAGTGGCACGGGTTCACAGTCTCCAGCGACG 30754 28 100.0 32 ............................ TGCATCATGTTGATCTCGTTCCAAACCCATCG 30814 28 100.0 32 ............................ GGCATCAATGAGGGTTTCGAACGGAACGATGC 30874 28 100.0 32 ............................ GTTGCTCTCGCGGTGTTGCGGTCGTTTCTGGT 30934 28 100.0 32 ............................ AGTGAGCAAGCGGCGGCGTGGTCGACGGTGCT 30994 28 100.0 32 ............................ GCCTCGCAGCATCCACAAGACTGCCGTGGCAA 31054 28 100.0 32 ............................ ATGAAATTGCCCTGGCACGCCCAGGGGCTCGG 31114 28 100.0 32 ............................ AGCGAGCGATAGTTGTCGAGGGTCAGGCTCCC 31174 28 100.0 32 ............................ CATGACGCATCGGCCGTGCCTGATGACAAAAC 31234 28 96.4 32 ..................T......... TTAGCCCGTTGATCGAAGCCGGTAATGCCGGT 31294 28 100.0 32 ............................ GCAAACCGTGGGAGTGAAAGAGATCCCGCGAG 31354 28 96.4 0 ......................A..... | C [31374] ========== ====== ====== ====== ============================ ================================ ================== 22 28 99.7 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : GCTGGTTGACGGGGTTCGCCGACCATGCCATCACGGGAAATATCTTGCCTGTCCCGGCCAGCACAAGCCATATCCGCGTTCTTCGGCGGCAAGTGAAAAGCTGCCCGGCACGGGAACGAGACCGGTTGATGCGCAGGAAGAATCTCTCCCTGGAGGAGGCATGCAGATGTATTCCGGACAGCAAAGCAAAACGGCTGGATCTTCCCTTCCTTACGGTAGATAGTTCCAGCACCGGACAACGATTCCGTCTATTCATCCAACAGCTATCAGCAGCAAAAATTGTCGAAGGCAGTTTTAACGCTTATGGCCTAAGCCCAAGCGCAACGTTGCCCCAGTGGTGAGTCAAAGGGTTGCCCGCCCTCCCTCGGGTAACCCTTTTTTTCAGAGCCATATCTGATCATTAAAAATCAAAAGGTTACACAACGCCCGCTCATTAGGGTTTCCAGCGCCTTTTCGTCGAGAAACCATGCCCAGTATGAATTTCGAACGAAATGCCTCTA # Right flank : AGGGGAAGTCCGACCGCACACCGATACTTTCTGGCGGATAAGGGCAACGGAGCGAGGGTTACCCGGTCAACTACACAATTTTGGCGAAACAAAAACACTAAACCGCGTTTGACGCCGAGACGCAGTCCAGCACCGGATGGCGGCGTAAATGAAGATGAAGCACGCGATTCCGGCCGATCCACTTCCTGCGAGGCCCCATCACCACAAACTGAGAACCTCCCTATTCTGCCTCGATACCGTCGAATGGGGAGGTGAGAACAGTGAAGCCGCCGTATAATGCCGGCATGATCATTCTCAACCAGAGACAACAGGATCTTCTCGCCTGGGTGCAGCGCGAGGGGCATGTGACGGTCGAACGTCTCGCCACGCATTTCGGCGTCACCCACCAGACCATCCGCCGCGACATCTCGCTGCTGGCCGACAATCGCATGCTGCAGCGTTTTCACGGGGGCGCGAGTATCCACTCCAGCGTGGAAAACGTCGCCTACAATGCGCGCCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //