Array 1 1596269-1596899 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050073.1 Enterobacter kobei strain 070 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1596269 28 100.0 32 ............................ GGTCCGGTTAAATCGAAATCATCCAGGAATTT 1596329 28 100.0 33 ............................ GGTACCAGAAAGCCGGCATTATGCTGGGTGATT 1596390 28 100.0 33 ............................ GGACCTGAGAGGGCGGCCTGTTGTTGTTCTCTC 1596451 28 100.0 32 ............................ GTAGCCCTCTCGACTCCCTTCGTCGTTCGTAT 1596511 28 100.0 32 ............................ AGAGTTTTACGCTTCCATCTGGCTGCTTACCA 1596571 28 100.0 32 ............................ GATCGGGGAATAACTATCAAAACCGTAGGTAC 1596631 28 100.0 32 ............................ ATTTGCACAGCCTGGAACTCTTCGAGTTGCTT 1596691 28 100.0 32 ............................ ACTGCCCGGACTGGGAAACGCTGGGAAAAATT 1596751 28 96.4 32 ..............T............. TAAATATCTGGTCTATCTGGTCGAAGTGATTA 1596811 28 96.4 32 .....................A...... GTCGTCGTCCTGTAATATGTCTTTCACAGCAT 1596871 28 85.7 0 .....................ACC..C. | G [1596891] ========== ====== ====== ====== ============================ ================================= ================== 11 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGATAACGAAGCCGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGAGACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTGCTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACTTGACAGGATTACTGCATGACATCACGCATTCAATGGCGGCAGATGTGGTATCTCCCCATGATGCTGGAACGGGAAATTCTGTTATTTCTTGAGTGAAGTGCACACCGCCAGGGGCTGTCCCCTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCATTGATTTATAATGTTTGCTTTTACGTTGCAGAAAAAAGGGTTTTGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCA # Right flank : AGCACCTCTCAAACCAACCCACTGTAATATTCATCAAACCTATTTAAAACCTTATACCATTCAATCTGCACTCTCTATTTTCACAATAAATAAAAAACCTATTCACGCATAAATTATATTCCATTGAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTTCCACTTTATTACTACGGTGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACAGTGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTCAGGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCGAATACTACGGCGGTGATGCTGGGAATGGGAACCTCCGTTACTCAAATGGCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1606392-1607981 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050073.1 Enterobacter kobei strain 070 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1606392 28 100.0 32 ............................ TTCGTCTTTAAGGCAAATAACTGGAGCATCAT 1606452 28 100.0 32 ............................ GTCGGAAGGGTTAGCGCCAGCTTTATGGCCGT 1606512 28 100.0 32 ............................ CATGAAAAAGTTAATGTTTACAGAAGGTTGCT 1606572 28 100.0 32 ............................ TTATTGATAGCCATGTCCCAGACCAGCGACGC 1606632 28 100.0 32 ............................ TGGTTTTACCTGCGCCTGTGGCGCCGGTAATG 1606692 28 100.0 32 ............................ ATTCAACGCTGAAGAAGGCACCGCCGATCTCG 1606752 28 100.0 30 ............................ GCTGAGGTGCTACACCGCTGGCGAAGATAA 1606810 28 100.0 32 ............................ GTGAAGTGTCGGACCTCAACGACATCGATGCG 1606870 28 100.0 33 ............................ AAGCTGGCGTGCTGACCGTTCACCAGCAGGAGC 1606931 28 100.0 32 ............................ GCTATGGGATGGAGTCAACGCTCCTGATAATC 1606991 28 100.0 32 ............................ AGAAGTATTTGACTACCTGGCGGTGTGGGCGG 1607051 28 100.0 32 ............................ GAAACCGCGCCGGCAGCTGGTGCAGAAACCGC 1607111 28 100.0 32 ............................ ACATTCTTCAGGTAGTGGCGAATGACAGCATC 1607171 28 100.0 32 ............................ CTGCGGTCATGCCCCAAATAGTTAATGTTGCT 1607231 28 92.9 32 ..G.........A............... TGTTTGTCCAGGTCGTTTAGGTGGTACTGGTC 1607291 28 92.9 32 ..G.........A............... AGCATCGAGAAACCGACGTTAAGCGCGCGCTG 1607351 28 92.9 33 ..G.........A............... TTTCTCGGAGAGCCCTGGTATGACACCACGCTT 1607412 28 92.9 32 ..G.........A............... CTGACCGGGCGTTTACTACAGTGGTGTTCTGG 1607472 28 92.9 32 .......C....A............... ATATCGCCGCGCAGTTCGCCGTTCTGGTCAAA 1607532 28 96.4 33 ............A............... TCTACGCCGTCATAACCGCCCGGGAGCGTCATG 1607593 28 89.3 32 .....A......A....T.......... AACAAAAGAATTCAAAAACGTGGTGACATGTA 1607653 28 92.9 32 .....G......A............... AGAAACCGATAAAGCGATCATTGTTTCTGCAT 1607713 28 96.4 32 ............A............... GAAAACGTCCAGCGTATCTTCGCTGCCGACGA 1607773 28 96.4 32 ............A............... CATAGCGATAGTGTTTTCACCCGTTGTCTTTG 1607833 28 92.9 32 ..........A.A............... TGCGCACGCACTTCAGCCAGGAAAGCGTCGGT 1607893 28 92.9 32 ..G.........A............... CGTCGTGAACGAGCTGCCGCCGGAAGGCGAGA 1607953 28 82.1 0 ..G.....G...A..T....T....... | C [1607978] ========== ====== ====== ====== ============================ ================================= ================== 27 28 96.4 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGCTCATTAATTCCGGTAACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTGGATGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATAAATGAAACGGATGTTTTTTATGCAGGGGGGTATAAGAAGAATGGCGTTCGACCCTAATTTTTAGTGCGTTTGTAAGGCATTGATATTAAATGGGTATTTTGAGGGGGTAAAAAAGAGGGTAAAAGAAGGATTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGGGGGGATATTATTTGA # Right flank : AATAGAGAATAAGGTCTCCCCCTTCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGC # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3795637-3793961 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050073.1 Enterobacter kobei strain 070 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3795636 29 100.0 32 ............................. GACGCATCCTTGTTAAACTGCCTGACAATGTT 3795575 29 100.0 32 ............................. CCCTGCGCCTCGATGGTGTCCAGATACGGCGC 3795514 29 100.0 32 ............................. GAAATCAAATTGCTTGCCGGTGTTGTTTAAGA 3795453 29 100.0 32 ............................. TTAATAATCTGAGTGGTCGCATTGATGATGTT 3795392 29 100.0 32 ............................. AATCTAAATCAGCAACAGACAAGCCGAGGGGA 3795331 29 100.0 32 ............................. AATACGCGGGCGATAGCGCGTGATTTCAGCGT 3795270 29 100.0 32 ............................. AGCTGCGCTCTGGCAGCGGTGAACCAGTCATC 3795209 29 100.0 32 ............................. ATATCCGGGGCTATACCCAGTGCCACTTTTTC 3795148 29 100.0 32 ............................. TGCACAGGCTGGCGCGGATTGCGGTTCTTATC 3795087 29 100.0 32 ............................. CATCATCGGGCAAATCGAGACGACTTTGACGT 3795026 29 100.0 32 ............................. CTCTGCACCGTGAGAAAGGATATAGAAGCGCT 3794965 29 100.0 32 ............................. CGTGCTGCAGGGATGCGGCCATCTGCTCCGGG 3794904 29 100.0 32 ............................. TCACCTTTGGTATAACGCTCTTCCCCCTTAGA 3794843 29 100.0 32 ............................. GTAGCAACTGAAATTCGTTGCGTTTTTTCATC 3794782 29 100.0 32 ............................. GCAGCGGATTAACATACACAAAGCCTGATACG 3794721 29 100.0 32 ............................. ACCATATCGATTGACGGCGCGGCAGTCTTACG 3794660 29 96.6 32 .........T................... AAATATCCACGGTAACAGCTCAGTCATCCCAA 3794599 29 100.0 32 ............................. CAGTCGTCATAAGTGCGGCCGAGCCAGTAACC 3794538 29 100.0 32 ............................. CCAGGGCTCTCTTACTTCTGTATCTGGCTAAA 3794477 29 100.0 32 ............................. GCGACCCCGTTAACTTACGTCTGGTTTTATCA 3794416 29 100.0 32 ............................. GAACGTAAATATGCCAGCTTTTGTGTTGTTGG 3794355 29 93.1 32 ............T.............T.. CAAACGATGATCAATTCCTGGCAGTAGCCTAA 3794294 29 96.6 32 ............T................ CGCCATGCACCAACACCAGCTTCGATTTGCTC 3794233 29 96.6 32 ............T................ GCAACAAGAAACTTGCAAAAGAGTTTGGGTTA 3794172 29 100.0 32 ............................. GAAACGGATCAGATTAAAATCGCTATAGTGTC 3794111 29 100.0 32 ............................. ACTGAAGTTAGTGAATATTTGACTGGTTTACA 3794050 29 96.6 32 ............T................ AACGACGGGTTTGCGCCAGCGGCCAGGGACCA 3793989 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.3 32 GTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : GGTTCTTGCTGCCGGAGAGATTGTGCCGCCGCAGCCCGCAGCGGATATGCTACCGCCCGCCATACCGGAGCCGCTGGCGCTCGGAGATGAGGGGCATCGGGGAGGTGGAGGATGAGTATGGTGGTGGTGGTTACTGAAAATGTACCGCCACGTTTGCGTGGCAGGCTGGCGATCTGGCTACTGGAGATTCGCGCTGGGGTATATGTCGGTGATGTTTCGAAACGGATACGTGAAATGATCTGGCAGCAAGTGACGATGCTGGGTGGTGAAGGCAATGTTGCAATGGCCTGGGCCACGAATACCGAGTCTGGTTTTGAGTTCCAGACCTGGGGAGAAAATCGTCGTCTTCCGGTAGATTTGGATGGTCTTCGATTAGTGTCCTTCTTTCCTTTGGCTATTCAATAGTTTACCTGCTCTTTAACATTATGATTTTGTGATTGATATGTTGGTAGGATGTTTTTTCTTTATAGGGTATTGATTTATAAGATTATATTTTTAGT # Right flank : ATTACCGGTCCAGCTATTTCCCCGCCTTCGCCAGCTCCTTTACCAGCGGCAGCATCACTTTCACCACGTCCCGGCTGCGGTGTTCAATGCGCTGCGGCAGGGCGCTATCAATATGCTGCTGATTATCCAGCATCACGTTATGCCAGCTTGTCCCGTCCGGGAAGGCTTTCGATTTTCCCCGTTGCTGGTAGCCATCTTTTTTCCCCAGCGCCCAGTTGGTTGCTTCCACGTACAGGACCGGAATGCCCGCTTTATCGAACACTTCGCCGTCGTTGCAGCAGCCCGTTCCTCGCGGATAATTTGGATTGCCGCCCGGGTTGCTGGCGGCATACACCCCATGGCTGCGGGCAATGGCGAGCGCCCGGTCACGCGTCAGTTTACGCACGCTACCCGGCGTACTCTGTCCGCTGTTGAAATACAGTTTATCGCCGACAATCAGGTTATCGAGGTTAATTACCAGCAGCGTATTTTTCTTCTCTTCAGCGCTCATGCGTTTAAGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //