Array 1 8710-11497 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHDL010000004.1 Campylobacter sputorum strain YZU0717 NODE_4_length_177787_cov_120.614130, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8710 30 100.0 36 .............................. TAAAATTATTTGATGTTCAGTTACCTAATGAGATTG 8776 30 100.0 37 .............................. AAAAATAAAGTAGAAAAGGTGATGGAACAAAGAAATC 8843 30 100.0 36 .............................. AAGATAGATGATAGTGTAGTCCTTGCTACAAGGCAG 8909 30 100.0 35 .............................. CAAAAAAACAACGCCTTTAATGATGATGAGCTTAC 8974 30 100.0 35 .............................. TAGCTACTTTGATAGAAAATGAAGTTTTGGATGGA 9039 30 100.0 38 .............................. CTGCTTGCATTGTTCTCTCCTGTGCAGATTTTTGCTAT 9107 30 100.0 35 .............................. TAACAAGCAAGAAGAAGCTTGGAAAAAAGTTCATC 9172 30 100.0 35 .............................. CAAATAAATTTCCGCCTGTAATGGCTTGTGCTGTG 9237 30 100.0 35 .............................. TAAGTTCATTTATACCGCCAAGTCCAAGTGAATTT 9302 30 100.0 36 .............................. ATAAAAAAGGATGACAATGCTTAAATTTGAAGTTGG 9368 30 100.0 35 .............................. ATTTCAGCTTTGATACAGCTTATCGTAATACTTTA 9433 30 100.0 36 .............................. TAAATTTAAGCCATATTGCAGTAGGTGATGGAGAGA 9499 30 100.0 36 .............................. AAGTAATAAAACAAATAAAAGATAATCCAACACATT 9565 30 100.0 34 .............................. TTAGTGTCAATGTCAAAGCCAATTTTATATAAAA 9629 30 100.0 36 .............................. CTGTAGCAACAATAGTAGAAACCATATCAATTCCAG 9695 30 100.0 37 .............................. TTAGAATGTGCTATCAAATGGGTGTAAATAGTGTTAA 9762 30 100.0 36 .............................. TTGGATATACATACGGAGGAAGTGGGGATAATTTCA 9828 30 100.0 35 .............................. CATTTAGCCCTCTGCGAATACAAAGAACACTCTCG 9893 30 96.7 35 ..................A........... TAGTCCTGTTTGTATCAACATTAGGGATTATTAGC 9958 30 100.0 35 .............................. TTACAGGTGAGTATATTCCATTTGACTATACAAAA 10023 30 100.0 36 .............................. CAAAAAAGCTAAAAAGCTAGAACAAAAGCTGTTTGA 10089 30 100.0 36 .............................. TTAGGTAAAAAAACTATCAAATCAGGGAAACCTGCA 10155 30 100.0 35 .............................. GTTTAAAAAGGATTATTTATGGATGAATTATCAAA 10220 30 100.0 35 .............................. ATGAGAGTAATATAAATCTCATAAGGCAAGAATAC 10285 30 100.0 35 .............................. ATGTTAAATCCAACTATACCCATTCAACAACACAA 10350 30 100.0 34 .............................. TCAGAGAATGGGATATGTATTATAATGAGAATAA 10414 30 100.0 36 .............................. CTTAATTGTTTTGCAAATTGTGTTAAATCGTCATCC 10480 30 100.0 35 .............................. GCTTATATGACATCTTCTGCTGAAGATACTGCAGA 10545 30 100.0 37 .............................. CAAATAATGACGAGGCTACGACTACCGATATAAGTGA 10612 30 100.0 34 .............................. CTTAATCAAATGGTTAGAAATTTACGAATTAAAA 10676 30 100.0 35 .............................. CCAGCACCTATGATATTTGCCAAAGCCATTGGAAA 10741 30 100.0 37 .............................. ATTCTAAACTAGATACAAAAGCAGATAGTGAAGTAAG 10808 30 100.0 35 .............................. CAACAACAAGCCAAAATAGGTATCATAAAAATACC 10873 30 100.0 35 .............................. AAACTTCCTTGGCTAAAAAACAAACCAAGGGCGGT 10938 30 100.0 36 .............................. CGTTATAGTTACGGCCGCCGTTTACTCGGGCTTCGA 11004 30 100.0 36 .............................. CAGGAAAAGAAGTATCAAAAAGCTATCTTAGCGAAA 11070 30 100.0 36 .............................. TAAAGATGATATAGATAATAAAAGCGATGAGATAAA 11136 30 100.0 36 .............................. ATCCTATGTATGAGTTTGATAAACGAGGATTAATTT 11202 30 100.0 37 .............................. TAACAACAACTTTTAATATAAATGACCCAAATGCAAA 11269 30 100.0 36 .............................. CAACTATTGAAAAGGGTCGGCGATTTGGTTTTACAA 11335 30 100.0 37 .............................. CTTGAAGAGTTGCAAAAAGCTGAAAATTTAGAAGAAC 11402 30 100.0 36 .............................. AAGCTTCATCACTTAAATAATCGTGAACTACAACGG 11468 29 86.7 0 ..........-.C............T...T | A [11486] ========== ====== ====== ====== ============================== ====================================== ================== 43 30 99.6 36 GTTAAAATTTGATCCTATGGATTTTGAAAC # Left flank : TTAGGGGATAATTTGATTTTTAATATGCTAAACAAGGATGAAATCACAGCAAAAGACTTTAAAACCGATGCTGGAAGGATAAGATTTACAAACGAAGCGGTGCAAAAAATAGAGTTAAATATGATAAAAGCCCTTACTTCACAGGTAAAATTTGAAAATCAGCTTCTAACTTACAGACAGATAATTAGGCGTGAGGCAAATCAGATAAAAAAGTGTATTTGTGAGAATTATCCCTATGAAGGGTATGTTGATTAGTTTTATTGTGCGTAAGGGAAATTTTGTATTTTTTGGGGATTAGTTTTTAAAGCTAAATTTGGAATTATAAATTTTGGTTGGTATTTTGGTAGCGTTCAAACTTTTTTTAAAGCTAAATTTAAGTTTATACGAATGCCTATATTTAGCGATTTTGTTTTATAGACATAGCTTTTATAAGCGGCTTTTAAGCTGGATATATCTATAATAATTCGCAATGGTTGCCGATATATGACGATTTTGTTGCT # Right flank : TCCAGCAATCTTTGCGGTAATAGTATCAGACGACATTCAAAATGGGGATATATAATCAAAAATAGTAAAAATCCCATTTTAAATGCAAATTTAAAACATTTAAACACTTTTTAAGCCAATTAACATCTCTTATCAACCCTACAAATTTACCTATTATTTGACACTCACATTCATAATATCTAACAGGTGTATATAAAGGATTATAAGATACTAGCATAAGCTCATTTTCTTGTTTATAGCACTCTTTTATTACAAGTCCATCTGGTGTATTGATAGCATAAATGCTTCCATCTTTGTATATTATATCAATAGCTATAATGCATAAGTCGCTTTCCATGATATGAGGTTCCATACTATAACCCATACAAGAGATTATATCAACTTGATGTATAGTGCCACAATTACTAATTTTTTGAGTATTTTTTTATCTATTATTACTTCATCAAGCTCATTTTCATCATTATATTCTCCACTATCAAGACTAGCTTTTAAGCTAGACA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //