Array 1 1815629-1815295 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022374.1 Acetobacter oryzifermentans strain dm chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1815628 29 100.0 32 ............................. CCTTGGTGGCGCCCTCAATATGGGGATGGGCA 1815567 29 100.0 32 ............................. ATACCTACAGCCTGACAGATCTGCTGCCTGAT 1815506 29 100.0 32 ............................. GCGTGAGACAGCGCGTGGTGGCTGAGGAGGCT 1815445 29 100.0 32 ............................. GAACACCCGCGCAGGAGAGAAGGCGTGAAACA 1815384 29 100.0 32 ............................. GGAACCACATGGGAACCGCAGGAACCTCGCTA 1815323 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCCGGTGAAGCGGGGCCGCCACCAGTGCAGAAAGAGGCGATGCCCGTTGCGTTTGCTGATCCGAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCGCCCCCGCGTTTACGCGGGCGGCTGGCTGTATGGCTTCTGGAAGTGCGGGCTGGTGTTTATATTGGCAGCTACGGGCGGCGTGTGCGGGAAATGATATGGGGGCAGGTCTGCGCCTATATTGAAGATGGCAATGCTGTGATCGCTTGGGCGGCTCCAAATGACGCCGGTTTTGAATTTGATACTTGTGGGGAGAACCGTCGGGTGCCGGTAGATCTGGATGGTTTGCGGTTAGTTGCTTTTGGTCGTGAAGCAGCTCTTCCGATGCAACCAGGCCCTGCTGTAATGACCCTTCCAAGACGGCGTGGAAGAGGGTAAAAAACAGTCATTCGTCTGGTAGATTCTTTGATAGTAAAATAATGTTTTAAAATCAATTGGTTCCACAAAGA # Right flank : GTGAAACCCTTACTCTAGTGGAAAAGGCATGGGGGTTACCGAGCAAGTGGGTAATCGGTATAGCCTTCTGCCCCCTGTGTGTACCAGGTTTGGATATCATCCTTATTCAGGGGAAGGTTATCTTCCAGACGGTGCACCAGATCCGGATTAGCTAAAAAAGGTCGGCCAAATGCAATGGCATCGGCAATACCGGTTGCGACCGTTTCAATCGCTTCGTCCCGTGTGTAATCCTGATTCAGAACCAATGGTTTTGTAAAAACTTTGCGGATCGGAGCATGCAGCTTCGGCTGATCGGTCTTGCCAAATGTGCCATGAGGGCCGGGCTCGCGCAGTTCGAGAAATGCAATATCGAGATCGTTCAGAAGCTTTGCGGCGGGTACGAAAACCTGATCGGGATGGGTGTCGATGCAGCCTTGTGTATTGCCATTTGGTGAAAGCCTGACAGATGTTCTGTCCGCGCCAATCGTGGCGATTACTCGTTTCGTGACTTCATGCAGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2204488-2204032 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022374.1 Acetobacter oryzifermentans strain dm chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2204487 29 100.0 32 ............................. CCACACGCGGGATTTTGGCGGCCATACAAACC 2204426 29 100.0 32 ............................. CATGAGCCGCACACCGGCACAGGCCAATGCCT 2204365 29 100.0 32 ............................. ACGCAAGAATGAAGCTGCGTGTGGCGTGTCCT 2204304 29 100.0 32 ............................. CTGGAATGATGATTGGTGTAGGACGTTTTCGC 2204243 29 100.0 32 ............................. GATCTCGTAGGTTGGCGAGAGAGGCCTTGGTG 2204182 29 100.0 32 ............................. GGTATCCCGCAAATGGCAGCCGGATTTCAGGA 2204121 29 100.0 32 ............................. ATAGGCAGGAACACGAAACGGCGCACGCCACG 2204060 29 96.6 0 ........T.................... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CACTTATACGAGTTGCAAAGCCGGGAGGGTACATTTGGCTTTCATCTGGGGCGTAAAGCACGTCCACTTTGCCGGTATTGCGTAGCAGGCCAGCATCATCTTCCAGCCCGCGCGGGTAATGCTGGAAATCATTGGTGTTGTTGAATTGGATAGGATTTACAAAAATGGACACAATTCGACGGGAGGCTTTGCCATCCAGCGCATTTATGAGTGAGATATGGCCTGCATGAAGTGCGCCCATGGTCGGCACAAAGCCAATAGTCTGGCCATCTTTCCGCCAACTGGTGCTGAGTGCTGCCAGTTCTGCTTTGGTTTTTACAATCTGCATGATGAATCCTGAACGCCAGTAATTTAGTCAGCCGGAATAAGTGTTCCAAACTGCAAAGTGCTGCAATGTATCCATGAATGTGCCACTATTCCAGAAGTGGCTGGGCCCTTTTATGGTTGGTGGATTCTTTGACAGTAAAATAATGCTATGGAATCAAATGGTTCCACAAAGA # Right flank : GCTGACTCCGTAAATAAGGTCGTGCTCGTTGGGTGTTCCCCACACGCGTGGTGACTAGCTTGAAACAAAACTTTAGGTAGAGTGAAAAGCTTCCAGTCTGTGCTATAAAGACGCATGTCTTACGCTGATTTTGTTCATCTTCGTGTTCATTCTGCCTATTCGCTTAGCCAGGGGGCCATTCGTGTGCCCGATATTGTGGGGCTGGCGAAGGAAATGCACATGCCTGCTGTGGGTATTGCAGATTCAGGCAATCTGTTCGGGGCGTTGGAATTTTCTCAGTATTGTACCAAAAGCGGTATTCAGCCTATTATTGGCAGCCAGATCGGCCTGCCTGCGCGTAATGACAAACCCGGCGCCCCCGCCGAGCCTGTAGTGCTTCTGGCACAGAATGAAGCAGGGTTGGCGAATCTCCAGTTTCTTTCTTCAGCCGGGTTCCAAAATTCAGATCCGGCAGACCCTTTTGTTTCTCTGGATTTGCTATGTGAGAAAGCAGAGGGGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //