Array 1 22233-20662 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSTC01000021.1 Pseudomonas sp. A-1 Scaffold18_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 22232 32 100.0 37 ................................ GGACGACAGGGTCGAGGCGAACGCCCGGTACTCTGCG 22163 32 100.0 35 ................................ TTCACACTGGCGGAGGCGCCGGCCTGGCGCAGCTC 22096 32 100.0 35 ................................ TTCGGCATGGCCGACCGGGCGAAGCTTGCGCAGTC 22029 32 100.0 35 ................................ GCCGATGCCGCGTGCTCAGCGGCCACGTCCCGGTC 21962 32 100.0 33 ................................ TACGGACACCTTGGCCCATGTCGGAAGGGGCCG 21897 32 100.0 38 ................................ TACCTGGAGTCGCTGGCCAACGACGCCACGCTGCTGCT 21827 32 100.0 36 ................................ CCCAACGCGCAGCGCGGCCTCGGCGTCACGGCCACG 21759 32 100.0 34 ................................ AACGCAGCGAACGGACGTCAGTACATGATCCCCA 21693 32 100.0 36 ................................ CATACCGCACCCCCGGCCGCCAGCGCGCCGACCAGC 21625 32 100.0 35 ................................ ACCACGCCGGCCACCTTGTAGCCGTCCAGCCGCTT 21558 32 100.0 34 ................................ AGCGCCACCGGCCTGATCGGCGAGACCCTGCCGA 21492 32 100.0 35 ................................ GTCGGAGACGAGGCGACCTGGCTCGCGAGCCTGCA 21425 32 100.0 36 ................................ AAGCAGGTTGCCCCCAACGGGCTGTACGTGCCGGCC 21357 32 100.0 34 ................................ TCCCGCACATCGGCGGGCGACTTGCCGTCCACCG 21291 32 100.0 34 ................................ ACATGCTGCTCATCTGCATCGGCGTATCGCTGGT 21225 32 100.0 35 ................................ ACGTCGAAGGGCGCAGCGGGGTCCGGCAGCTGGGC 21158 32 100.0 34 ................................ GACCACCACGGCATCCGACTGGACCGGCGCAATT 21092 32 100.0 35 ................................ CGCGCCTGGGGTCAGGACGGCGTGGAATGCGTTTC 21025 32 100.0 35 ................................ TTGCATCTGCCCCGTCGTCTCGAGGAGGTACAACA 20958 32 100.0 34 ................................ GCCTGGATCTTGCCGGCCAGGTCGCGCTCCCAGC 20892 32 100.0 36 ................................ GACCTCGGCCCGCTGCTCGAGGGCATCGGCATGGAG 20824 32 100.0 34 ................................ GCTGGCCTGGCCCTGCTGATCAGCCTGCTGGCCG 20758 32 96.9 33 ...........C.................... GATTGACGGCCAATGCGGCAGCGGCTGCACCGT 20693 32 84.4 0 ........C..C....CT...C.......... | ========== ====== ====== ====== ================================ ====================================== ================== 24 32 99.2 35 GTCGCGCCTCATGCGGGCGCGTGGATTGAAAC # Left flank : CCACCGTTTCTGTGGAAGTGAGGTGCCGGGCATGATGGTTCTGGTGAGCTATGACGTCAGCACCGAAGGAGACGGCGCCCGGCGTTTGCGAAGGGTTGCGCGGGCTTGTCTGGACTACGGGCAACGAGCGCAGTACTCGGTATTCGAGATCGAAGTCGATCCGGCGCAATGGGCCTTTCTCAAACAGCGCCTGTGCGACCTGATCGATCCGGAAGTCGACAGCCTGCGCTTCTACTATCTGGGGCGGAACTGGCAGTCCCGCGTGGAGCATGTCGGGGCAAAGCCGGTGCTCGACCTGAATGGTCCCTTGATCCTCTGAAGCCTTTGCGAACCCCAAGCGACCGGCGAATCCCCGGCAGGTTCGCAGCTATTTAACAATTTGAATTCATTGATGTTTTTCGATGGTCTGTGGATGAAGGATCTTGATTGCGCGAAGTGTTTTGGCGGTTCGCGAATCCACGCTGGTTTTCTTAATTGAATCAATGAGTTATAAGAACGTG # Right flank : AGGCAGTAGTCCGCGCCACCGTGCAGCTGATTGGCTTTGCTCCCCGATTGAAGCACAGGATTTGCGAACGAATTGCTCAAGGCCGCGTTAGGAAGGCACTCTTGGAGTTGATCTTTATCAGGGCAGTCGGTACTTCTTGTGGTTAGCGCTTTCCCATCGACCGCCGCGTACCGCGCGGGGCCATGCCCGGGCGTTTGTCGTGGTTGCACTTGTTGTTGCGCTGGTGCCAGGGCTGACCGTCGTCCTGCTTCGGAGCGTAGGTTTCCGGCGAGAAGGGGAAGCGGAAGGCGGGGATGCCGCCGCTCTGGCCGGCTTCGGTGCCGGTCGGCTGGGCTTCGCAGGGTGCATGGGTGTCGGGGGTGTTGGTCTTCGACATGGTGTATCCGGTTCGGCGTTGGGGAGGCTCTGGTCGGCCAGACCTCGGTGCGGCACGCATTATACCCGGTCGTGATGCGTCTGCCGTGCCCTCCGCTGCGGTCGCCCGCCGCCGTGCGGCGGCA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCATGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //