Array 1 8004-10310 **** Predicted by CRISPRDetect 2.4 *** >NZ_OXJV01000019.1 Shewanella algidipiscicola isolate 1Shewanella algidipiscicola H1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8004 28 100.0 32 ............................ ATCGAGCGGATCATCAAAGAAACCGCGATGGT 8064 28 100.0 32 ............................ ATTTGAATACCCAAGCCTCAGCATTCGCTGGG 8124 28 100.0 32 ............................ GAGTCGTCTAACTCCCAGTTGTAACAGCGATA 8184 28 100.0 32 ............................ ATCAAGAATGAAGTATTGACTGAAATTCAGTA 8244 28 100.0 32 ............................ TGAGGTGCGAGATCGTTTGCTTTTAAGTCATA 8304 28 100.0 32 ............................ AAAAATGGAGCAAGGCAGCTCGTGAGCAACTA 8364 28 100.0 32 ............................ ACCAAGACACCATAGTGCAAAGAGCATTAATG 8424 28 100.0 32 ............................ TGAATAAATCGGTACCGCGCATTCGCTCATCA 8484 28 100.0 32 ............................ AATAGGCATCCAAGAAAACCAATTTTGCCACA 8544 28 100.0 32 ............................ TTTCTTATTCTGAGTTCCTTGTAGCCCTTTTA 8604 28 100.0 32 ............................ ATGATGACACTTTGCAAGAAGGATGGTTTGGG 8664 28 100.0 32 ............................ GTACCTGGGCCGCGCGGCGCATCATGCTCAAA 8724 28 100.0 32 ............................ ATAAAGCACGGAATAACCGCCATAAGCGCAAC 8784 28 100.0 32 ............................ ATTGAAGCGTTCCACCTTTAAACTGACCGTTT 8844 28 100.0 32 ............................ ATGATGAATCTGCAAATAACCATCAATAACAA 8904 28 100.0 32 ............................ ATGCGGGAATTGTAGCTTAGTTCGCTTTATTG 8964 28 100.0 32 ............................ TATATGTAAAGAGCCTGTACCTGTGGTTACTG 9024 28 100.0 32 ............................ TATTACCATTGCATTGCGCGGTGGGTTAAATC 9084 28 100.0 32 ............................ GTCTAAATAGTTTGCCACGCGCTTTGGGGATT 9144 28 100.0 32 ............................ TCGTCCCTGAATTAGATGTGATTATTGCCAGC 9204 28 100.0 32 ............................ CATTGAGGTACTACGACCTTTTTCAGTTTCCC 9264 28 100.0 32 ............................ GAGTTAGTTGATTTAAACTGACCATCAGCTTT 9324 28 100.0 32 ............................ TGTGCGCGCTGTTCGGGATTGCCCGACTGCAA 9384 28 100.0 31 ............................ AAGATCTTATCGGTCAGGCGTGTTAATCGGC 9443 28 100.0 32 ............................ TTCTCCGGTGATTGTGGAGTTCGTCGCGCTGT 9503 28 100.0 32 ............................ TGCAACGGTTGCTGAGTTAAAGTCGGTATAGG 9563 28 100.0 32 ............................ TGGCGAACCCTTGCCCCCAAATTGATTCGATG 9623 28 100.0 32 ............................ GTCACCACTGCATCAGGTGCAACTTTTTATTC 9683 28 100.0 32 ............................ GCTTTGTCGGGTCGTCTTTGAAGATGGTTACG 9743 28 100.0 32 ............................ ACGCACAGCCAGAGCTAGAAACTCTACATGAA 9803 28 100.0 32 ............................ AGCCGCCGCTATGTCCTAATGAAATCAGCTGG 9863 28 100.0 32 ............................ CCGCGAATTCAGCTAGTGCTGCGCGATACACC 9923 28 100.0 32 ............................ ACAACAGGACAGGGAAAACAATACAACCAACA 9983 28 100.0 32 ............................ GCTATGAAACTCGGTTTCGCGGCAACAACTAG 10043 28 96.4 32 ........T................... AATTGTGCAAACGGGCGGCTATCCAGCGCAAC 10103 28 100.0 32 ............................ TCCAGTGCGCTAGCCGAGTGTTTAACAGGTGA 10163 28 100.0 32 ............................ TTTTACATTAGAGAACACACAGTATCGAGATA 10223 28 100.0 32 ............................ TCTGGCAGCGCTTTCTTAACCACTGATGTTAT 10283 28 96.4 0 ..........................G. | ========== ====== ====== ====== ============================ ================================ ================== 39 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCGTTTGAATCTTGGGAAATGGTTAAATCGTCTTGAAGACTATGTTCACATGAAAAGCATTGCCGAGGTGCCAAGTGAAGTAATGGGTTATGAATCGTTTAATCGTCGCCGTAAATCAGGCTCGCCTGATAAGCACATTAAACGACGCATGCAACGCCACAACGAAACATTGGAGCAAGCGGTAGCATTTTATCAAGGTTACAAGATGGCAAAAGAAGATAAAGATTTACCCTTTATCAGAATGAAAAGCCTACACAGTGATAATGAGTTTTGTATGAGCATTATTCGAAAAGAGGTAGAAGCATCGTCACAACGAGTCATGTTCAATACTTATGGCTTAAGTGGTGAAGGTGTATTACCAAAGTTTTAACCAATAAAAAACGCTCTTTAACAATGTGGTATAAAAACAGTAAGTTACAACGGGTCATTTTTTATAAGGTTAAATTGAAGTTTTTAACCTAACGACTTGTTGTAACTTATTTTTATGTTGATATTCTATT # Right flank : ATATCGATAGGCACTTACTCGCCAACCTTACACGTTCACTGTTAAATAACTAAATTCATAAATAACAGTGGTATTGTGCGTTTTGGCAGGCTTCATTCCCACTCACAGTTTAGGTTAACAGTGATGTTCTTGAACAATGGTCTAGTGGATGAAAATTGCGCACTTGCCATGGGTGAAACCTCAGAGCAGGAATAGAGTGGAACTGACACCTGAATCGTGAGGGGGGTTAAACGTGATATTGGTGGGGGTGAAAAGGCTAAATAGCCGGTTTGGGTTGCAAGTGGCCTTGGATGAGACATCGTTTGTGTTACGGCTAAAAAATAATTTTTGAGCCGTAACACTGAGGTGTTTTCTTTTATTTTACTGTTATTAAAGGGTTATAAAACAGGAGTACAGATATCGAAGTTGCAGTTAATGCAGCTATCGTCTATCAGTAATGCCATTATCTGGGTCCAATTACACCGCTTGGTGCGGGTTGCGGGTGTTTTGTCCGCTATTAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //