Array 1 3195165-3198732 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR993209.1 Mycobacterium canettii CIPT 140070007 isolate STB-I chromosome CAOO01000000, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 3195165 24 100.0 37 ........................ TGGCGCGGGCTGGCGTCGGTCGTGGACTTGCAGGTGC 3195226 24 100.0 37 ........................ GAACGCCACAGGCAAGTCCTCTCCGCTGTGGTTGTGC 3195287 24 100.0 37 ........................ GTTGGGTGTCGAGGTCACAACCACCAACGCGACGTGC 3195348 24 100.0 37 ........................ TCCAGGCCGCCGCCTTAAAGCGGCCTGGTGCGTGTGC 3195409 24 100.0 37 ........................ GCCGAGACGCTCTCACCGGACATCAACTACAGGGTGC 3195470 24 100.0 37 ........................ TCGGCTACCTCTGGACCGTACGTCTGGCTCCACGTGC 3195531 24 100.0 37 ........................ CGCACTGCTCAACCAATCCGCACAAGGCGGCGGGTGC 3195592 24 100.0 37 ........................ TAACTGTTCCGGGAGGGACAACACCCGACGTTTGTGC 3195653 24 100.0 37 ........................ TCGCATGAGCATCGTAGACGCTGTAGCCCGTACGTGC 3195714 24 100.0 37 ........................ CTGGGGGCCGTCACCGATCCCAACGTGGTGGCCGTGC 3195775 24 100.0 37 ........................ TAAAAAGGGCAAAATTCCCGTATTCATCGGGATGTGC 3195836 24 100.0 37 ........................ GCGGGGGCATCCTCGTCATTGTCGCTGGTCATGGTGC 3195897 24 100.0 37 ........................ CACGCGCCTGCGCACGCCGCACGGCGGCCGCTCGTGC 3195958 24 100.0 37 ........................ GCGGACCACAATGCGCTGACAACGTCCGTTTCAGTGC 3196019 24 100.0 39 ........................ TCGTCGACTCCGCCAAACCAATTAGCCCACCGCGTGTGC 3196082 24 100.0 37 ........................ TGTGTCCGGCGCGGCTGCGAAGAATGAGTTATCGTGC 3196143 24 100.0 37 ........................ GGGAACCACCCAAAAAATGTTGACACACAGCACGTGC 3196204 24 100.0 38 ........................ GCAGGCCGAGCCACATGCTGGCGCTGCGGCCAGAGTGC 3196266 24 100.0 37 ........................ GGCATGTCGCGCGCTCAGTCGCCACTGGATACAGTGC 3196327 24 100.0 37 ........................ TGTGCTGTTGCCGGCATGGTCAGAACCGGCGGCGTGC 3196388 24 100.0 37 ........................ GGTGAGGCGGCCGTCCAATCGTATCGCGCACCGGTGC 3196449 24 100.0 37 ........................ CTCGTCGATTAATTCCGGTATGAGTTCCCGTGCGTGC 3196510 24 100.0 37 ........................ ATTACTGTACACCCGGTTGTACACAGTCGCGAGGTGC 3196571 24 100.0 37 ........................ GCCCTACACGAAGCCGTCGGCAAACGCCTCATCGTGC 3196632 24 100.0 37 ........................ GCCTTCACCGATGTGATCAACACCATCATCGAGGTGC 3196693 24 100.0 37 ........................ GGGATCGTGGCCGCGTTCGGCAGGCCCCTCGACGTGC 3196754 24 100.0 37 ........................ GCTGGTCACCGCCGGCTACCGGGTCGTCGCGTTGTGC 3196815 24 100.0 39 ........................ GCCAAACGTACAGGAAAGGATCCACACTGATGGGTGTGC 3196878 24 100.0 37 ........................ GCTGACCCAACTGGCCGCACGCCTACACGACGCGTGC 3196939 24 100.0 37 ........................ GCGGCCCAGCTTCTGCCCGCAATCCCGCTGGGAGTGC 3197000 24 100.0 37 ........................ CCGAGTTGATGTATCAGGTACCGTCACTGCGCAGTGC 3197061 24 100.0 37 ........................ TACATTCTCCCGGCGCTTGGGGCGCTGTTCGGGGTGC 3197122 24 100.0 37 ........................ GAGGCGATTTCCCCGTGGGTCGACTGGCCGGAGGTGC 3197183 24 100.0 37 ........................ GGCACTGCACTCGCAGCGGTCGCGCAGATGCCCGTGC 3197244 24 100.0 37 ........................ CTATTTTCGGCGCACACACCCAATACCCAGTGCGTGC 3197305 24 100.0 37 ........................ AGCGGCAGTGCAGACTATGGAGTCTAACCTTGGGTGC 3197366 24 100.0 37 ........................ TTCTTTAACATCGTCTCGTTTACCGTTGAGCAGGTGC 3197427 24 95.8 37 .......C................ CACGTTCCTGGCGGGCTTGGCGCAGGCGTTCAGGTGC 3197488 24 100.0 37 ........................ CAAGCAGACGCACGAAACTACACCAACGTAATTGTGC 3197549 24 100.0 37 ........................ GAATTAGCATGTGCGGCGGCGGAAGGATATGCCGTGC 3197610 24 100.0 37 ........................ GGGCGCGTAGCCGTCGCGGGGCCGCAAGCGCAGGTGC 3197671 24 100.0 37 ........................ GTCGCGTTCACGAACCGCGGAACCCTCTCTTAGGTGC 3197732 24 100.0 37 ........................ GCTAGAGCTGTAGATTGATCCGCCCGGCTGCCCGTGC 3197793 24 100.0 37 ........................ GATTCCGCGCACCGCCGGGCGTCGCGGAGTGGCGTGC 3197854 24 100.0 37 ........................ GTCGAATTCTTTTGGCTTGCTGAACCCGTACTCGTGC 3197915 24 100.0 37 ........................ TGCGTTGTGGATCGCATCTGGCATTCGCTGACCGTGC 3197976 24 100.0 37 ........................ CAAACCCCCCGCCCCGCCCCGCCTTGCCCCCCCGTGC 3198037 24 100.0 38 ........................ ACCGCCCCTGCCGAGGGTTTCCGGGATGCGATCAGTGC 3198099 24 100.0 37 ........................ GATGGTCGATCTGGCGATCGGTGAACTCCTCAGGTGC 3198160 24 100.0 37 ........................ GGCTCAACATGGGCGTGGAAGTCGGCTGCGAACGTGC 3198221 24 100.0 37 ........................ TCCAGAGGTCGAAGTGATGTTCGGTGTTCTCCTGTGC 3198282 24 100.0 37 ........................ GCACACAGCAGCAACTCGCGCAGCAACAAGGATGTGC 3198343 24 100.0 37 ........................ TGGAGAGACTCGGCTGCGGTCAGCGCCTCCTGAGTGC 3198404 24 100.0 37 ........................ CCAGACGGCCACGCCGTCACACGTCACGCACAAGTGC 3198465 24 100.0 37 ........................ CCGTGGAACAAAGCGTTCAGGATCGCCTCGAAAGTGC 3198526 24 100.0 37 ........................ TTGGCTGATGGAACCGGTGCGCGATGCTATTGCGTGC 3198587 24 100.0 37 ........................ TGCTGTGAGAAATATTCCGGCGTCTTTGTCCTCGTGC 3198648 24 100.0 37 ........................ GCCGGCCGATAAACTGCTGGGCCGCGGCCAGTGGTGC 3198709 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================= ================== 59 24 99.9 37 TCCCCGCAAACGCGGGGGTGATCC # Left flank : GACTTTTGACCGTTGTCGTTCTTACCGCCGTACCGCCAGGCCTACGAGGGCACTTGACTCGCTGGCTGCTTGAGATCAGCCCCGGGGTGTTTGTCGGCCACATCTCCGCGCGCGTCAGGGAGCTTATGTGGCAGCGCATAGTCGAATTCGTTACCGATGGGCGAGCTTTGATGGTTTACACCGCCCGCAACGAACAACGACTCGCCTTCAAGGTGCACGGCCATGATTGGGTTCCGGTTGACTACGACGGTATTTCGCTCATGCGCCGCCAGACGGTTCCCGATTATGTGCGAGCCAACCGACCGATCGGTGATGCGGTCAATCGCCTGCCACAGTCTGCCAGGGGCCAACCTATGGGAACGGCCTCAGACACCGTCTGGAAGCGCCGAAACGCCCGCAAGAAGTTCAAACGCAAGGCGTGACCAATTGGCATGTCGTTGCCGGCCGAATGAGCGAAATTTGTTGGTAAGATGAGCAATCGCCCTGGTCAGGAAGTGTGC # Right flank : CCAATTCGGCCGTGGTGCCCCGTGGCTCCCCCGGGGTGCGGTGCATCGGCGGGAGCACAAAACGCGCTTAGCGGATGACCGGACGGCGCACCGGAGAGTCGCCAAGAACGTCACCCCTGAAATCAAGTGGGACCAGGATGCACTGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGGATGACCGGACGGCGCACCGGAGAGTCGCCAAGAACGTCACCCCTGAAATCAAGTGGGACCAGGATGCACTGACGCGTTGCTCGGACCAGTCACCCAGGCGATGCGCCTCGACCGGCTCAAAAACTCAACCCACGGCCTCGCGGACCCGGGCGGCTACCTCGGCCAGCGCGGCCTCGTCGTGCACCGGCGCCGCCAACGTCGGCGTCACCGGCAGCCGCACCCAGCTGGTGCAGCCGGCGAACTCGGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCCGCAAACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //