Array 1 205513-199678 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYYK01000008.1 Lapidilactobacillus dextrinicus DSM 20335 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 205512 30 100.0 37 .............................. ATGTTTGGATTCGCCAACCCCGAAGTGGTGGTAGCTA 205445 30 100.0 36 .............................. AATCGAGTGGATAATATTGATATTGAACAACTTCAA 205379 30 100.0 35 .............................. CGTACCGGTCTTTGAAATAGCATCAAAGAAATCCT 205314 30 100.0 35 .............................. TTATGACCACCACGGCTACTGAAATTCATTAACTT 205249 30 100.0 37 .............................. GAAATGGCGAAAAGCCAATAAACACATTGTTAAGTTT 205182 30 100.0 36 .............................. GAAGCGAGTCTACGTTAATATTCAGGACGCTAAATG 205116 30 100.0 35 .............................. TGCTGAAGCAAGCGATATGGGTGAAGCCTTAAAAA 205051 30 100.0 37 .............................. ATGATTTGGTCAAGGAATTTGGTATTCGTGTTGCCGA 204984 30 100.0 36 .............................. AACTTGGTTGGTAGATTGCAAGAAACGTGCAATAAA 204918 30 100.0 37 .............................. ATGATTTGGTCAAGGAATTTGGTATTCGTGTTGCCGA 204851 30 100.0 34 .............................. TTGGCGTTGATTACTCAAAGATGACGAGTAGTCT 204787 30 100.0 36 .............................. TTTCTTTTGGCGTTTTATCGATTTGATCCATTAAAT 204721 30 100.0 36 .............................. CAACGAGCGCAACGAGATTATTGAGTTTGCAAGCTT 204655 30 100.0 36 .............................. AGTTACGCTTGGAATTGTTGTTTCCCAGCCTGTCGT 204589 30 100.0 36 .............................. AGTTACATAGCCCAAAACGCGGTCTGAACCATCTTC 204523 30 100.0 36 .............................. TCAACCCAAGATGTCATATCCTAACCAACGTTCAAT 204457 30 100.0 36 .............................. ACCAGCTATTCAGGTTAGAAACGTTAAAAGTCCTGA 204391 30 100.0 36 .............................. TGGGCATGCCTTTCTAACTGATGACGCACCAATCGA 204325 30 100.0 35 .............................. GCTAAATTAGCTACCAGTTTGGCGATTTTACCGTT 204260 30 100.0 36 .............................. GTCTTGCTCATCAGCGATACGTTGCATTTCTTTCTT 204194 30 100.0 35 .............................. GATTGCCAAAAACTATAACCGCTAATTTTATCGCT 204129 30 100.0 35 .............................. TTTACTGATGTAGATTGGTCAGTTGATACTCACCG 204064 30 100.0 36 .............................. AATGTTGTTCCGTACTTACTTCACAATTTAGCTATT 203998 30 100.0 36 .............................. AACATAGAGATTGGCAAGGTGACTCAGATGTTTGAG 203932 30 100.0 35 .............................. GGTTCATAACTGACTGAAAGCGCCCGGTGATTGTT 203867 30 100.0 35 .............................. GATATTGTTAGTCCGCAGAATGCTCAACTTGGTTT 203802 30 100.0 36 .............................. AGTTTCTGTCGCCATGAGTACACTTAATATTGCTAC 203736 30 100.0 35 .............................. GTGGGTAGTGCCTTGGCTAATCTACCAGGGTTGAA 203671 30 100.0 36 .............................. CTAATAACGTCAATGAATACGCAGTTATTGATACCG 203605 30 100.0 37 .............................. GTGGAGTAACCACTGATAGACCTGGTCAAAGTTAATC 203538 30 100.0 35 .............................. ATTTATTTAACTTCAATTAAGATTTTATTATAGAA 203473 30 100.0 36 .............................. TGTTGCGACTTGATAATCACCCATTGCGCGGAACTT 203407 30 100.0 35 .............................. TGCAAAGTCTTCAAAATGGTACATAGCTTGACGCA 203342 30 100.0 35 .............................. GGCATTAGCTTTGATGGCTCGCCAGTATCAACATC 203277 30 100.0 37 .............................. TGTAACCCTTTAACGTAATCGGCTTGTCCGAACCTTC 203210 30 100.0 36 .............................. AATTGCGTGAAATCGCCCGGCGATTTTGTCGCATAT 203144 30 100.0 35 .............................. TCAATCTGATTGGAATGTATCAGATACTACAAGTA 203079 30 100.0 36 .............................. TGACCTGTGGCAATACACTAGCGCCGGTCGTGTTAA 203013 30 100.0 37 .............................. AAGCGTCAGGCGTTGAGATAATGTTTGAGAAACCTTG 202946 30 100.0 36 .............................. TAATAACTTATTCTTTGATTTGGCACAAGAATTGAT 202880 30 100.0 36 .............................. CAAAGCGACAAAAATTCCAACTCAAAAATTTATGAA 202814 30 100.0 36 .............................. AATTGTTCGATACATTGTTCGAAAGACCATTTCATC 202748 30 100.0 36 .............................. TGATTGTTCGGGAATTGCCCAATTCGCGTTGGTGTG 202682 30 100.0 36 .............................. TCCCGCGTTTTTGATTACTTTAATAATCGCGTCGTA 202616 30 100.0 36 .............................. GAAACCATTGTCAATATCAGCTATGTTGTATGTCAG 202550 30 100.0 38 .............................. GGTTATTCAGTCGCGCAAGCTGGTAAGACAGGTCCACA 202482 30 100.0 36 .............................. AAATTTGATTTGCGAAACACATCTAAGTATGAAGTT 202416 30 100.0 37 .............................. ATGTTTGGTAAAGACGTACGCAAATCATTATCTCAAT 202349 30 100.0 38 .............................. GTTACTTGGACATCAAGTGATGCGACGATTGCAACTGT 202281 30 100.0 36 .............................. AAGATCGTGAACAAGGTATTGACGCTTCGGATTATC 202215 30 100.0 36 .............................. GTCTGCTCCAACTTGGTTCGCGATTTGGTCTAAAGA 202149 30 100.0 35 .............................. AATATAAAATATGAGTGTCATTGTGAACGTATTGG 202084 30 100.0 35 .............................. ACAACAAATGGCAAATGATAACATATCATTACGTG 202019 30 100.0 36 .............................. CCAATTCAACGCCCGCTTTTTCAGCATACGAGGTTA 201953 30 100.0 35 .............................. AGTTGTACTAAACCCAACTTTGCCGTCTGAACTAT 201888 30 100.0 36 .............................. ACCATGACGTCTAAGGTTACTACACCGATTGTGGCT 201822 30 100.0 36 .............................. AAGCCTCCATTATTTTGGACGGACAACGCAAAAATA 201756 30 100.0 36 .............................. GCTCAACATTTCCACTACGCTATGTTGAGTATCCAT 201690 30 100.0 36 .............................. GTCACGTTCTTTAATATTATCAAGGATCAGGAAGTA 201624 30 100.0 37 .............................. TGTCGCTTCGTGATTTGCGGGGGTGACATTTTTACTA 201557 30 100.0 37 .............................. TATTCTGAACGCACAAATTCTATTGCAAATTGCGAAA 201490 30 100.0 35 .............................. TATAGACGCGTTGGCAATATTGTGACGCTTCACGT 201425 30 100.0 35 .............................. GGTGCAACTTTCCGTGAACGAATTGATTATCCAGA 201360 30 100.0 36 .............................. CGCAGCTCAATCAAACTATGCATGATCTGGATAACA 201294 30 100.0 38 .............................. GAAAGCATCGAAAAAGGTTGGCTTAATCAACAATTGAT 201226 30 100.0 36 .............................. AACTTAGCCACAGCCCGGAGTAAGAGTACTAAAAAG 201160 30 100.0 38 .............................. ATTCGTTGCGCAAAATGATTTGCGTTTTCTTTTTCATA 201092 30 100.0 36 .............................. TTTTTATGATTTAATACATAAAAATTATTGATATGA 201026 30 100.0 36 .............................. GTTGTAAACCTCGTTAGCGTATAAACGTAATTCGTT 200960 30 100.0 36 .............................. GGAACAATATTTCAATATTGAAATGACGGCTTGGCA 200894 30 100.0 36 .............................. GCAAGGTGTGCCAATCACGACAATTCAGTTTTTATT 200828 30 100.0 36 .............................. CCATTCTTAAAACCACTTGACAACTGACAAATCAAA 200762 30 100.0 35 .............................. GTTGACCCTGACACTTCCACGCCAGCGATTGATGC 200697 30 100.0 36 .............................. GATTTTGCAAATACAAGACGCATACCGCGAAACAGA 200631 30 100.0 36 .............................. CTTGTATTCAGTCTTAAATCGTTCTAACTCATTAGT 200565 30 100.0 37 .............................. TCTTTTGCTCCAAAGGAACGCGTTTTCCACTTTAGAT 200498 30 100.0 36 .............................. TTTATTCGTCGCGCGAAATGATTAGCGTTTTCTTTC 200432 30 100.0 36 .............................. TTTATTCGTCGCGCGAAATGATTAGCGTTTTCTTTC 200366 30 100.0 36 .............................. TTGTCCAGTTAATGTTTTCATACTTACTGATATTGA 200300 30 100.0 35 .............................. TTTCAGCTATACGGTAGTTCTGGAAAACCAACGAT 200235 30 100.0 36 .............................. TTTGTTTGATATAGTTTTGTGTTCATACGATAACGA 200169 30 100.0 36 .............................. CTTGCATCGCTTGAAGAAGCGATTCTTTCATGATGT 200103 30 100.0 36 .............................. CACCCAAAACCAGTCGAGCTAGTATCATTCATATAA 200037 30 100.0 36 .............................. TCGAGGTTGTCGGGTAGTGTCATGGTGTCATTTTTG 199971 30 96.7 36 .......G...................... CTTTTGCCTCATTGTATTTTAGTAAGAGTTGTAAAT 199905 30 100.0 36 .............................. GCGTTTGAGTTTGCGAAGTTTTCGTTGTTTGCACTT 199839 30 100.0 36 .............................. TAGATTTTTCCAGTGACCTGATTTACGTTCAGCCAT 199773 30 100.0 36 .............................. CTATATTAACAAAATTTTTATGGGTGAAGGAAGCTA 199707 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 89 30 100.0 36 ATTTACATTCAATACTCTTTAGATAAAAAC # Left flank : TTCTTTTAACTTTGGATAGTCTAAAACCCCCTGATCAATTGCTATACCCTTTTTCTTTAGATAATACATATAATATTTAAGTTGGAATTCACTAGCTTTTTCGATAGCGCGTGACTGTTTTACCTCGTGCACTATTTTCCAGTTTTGAATAAAGTCAATCGCAACAACACCGTCAATCATTCGTTGATGATGCTCACGCTGATAACTCTCCTGATCCAACACACTTCCAAGTTGAACCCGCTCATTCTCAGCTTCGAATCTCACTTGATGTGTTGATAGCCACAACTTACGCTGACACACAAAATAATAGTTAATATCCCCACCAGTTATTGCCCTCATCAATAAATCACACTCCCACATCGAGAATAACCGTTCACCGATTGATCATAAATTCACTTATAAATTCATTATACTATTCTTGCAATTTATTTAACAATGAATGTTCAAAACTTATTAGATAAAAACACAAATGTTCATTGATTGTTGAACTACCGAAGCTG # Right flank : TCCGAGCCCTACTTTCCTTATAACCACAGACTTCGCACTATCAAATCTGTCGTTCTAACGAAAATAATTAAAAAAACAGAATAAAGATTGTCAGTATCTTAACAATCCCTATTCTATCAGTATTACGTTCATCTGTCGATCTCCTGCCAAAATGACGTTATTACCTATCGACAGTTTTTAAATATTTATTTATCGTCGGTGCCCCAAATTTCTTCTTTTAGGCGCAAAGCTGTTGGGGTGGTGGCCATACCGCCTTCTGCGGTTTCCTTGAAGGCACTTGGCATTTGCTCGCCAACACGGCGAACCGCTTCAATAACTTCATCAGTGGGAATAACCGAAGTCAGCCCAGCCAACGCCATGTCTGCGGAAACCATCGCTTGACTAGCACCCATGGCATTACGTTTAACACAAGGAATTTCTACCAAACCAGCAACCGGATCACATATCAACCCCATTAGGTTTTGCAATGTAATGGCAACAGCATAGCTGGCTTGCTCAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCAATACTCTTTAGATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 214467-215222 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYYK01000008.1 Lapidilactobacillus dextrinicus DSM 20335 NODE_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 214467 30 100.0 37 .............................. AAATTTCCTTAGCTTAATCTTCATCAGTGTTTACTTC 214534 30 100.0 36 .............................. ATGATTAAATCCGGGCAATTAAGGCGTCCAAAGAAC 214600 30 100.0 36 .............................. TCCCGTGACATTGAAGTTAATACGTATTCCAACATG 214666 30 100.0 35 .............................. AAAGTTAATCGATATTGAAACTGACGAAGAAGAAG 214731 30 100.0 37 .............................. CCTTGCCAAACACGATTGCCATATATGCCTTATCAGT 214798 30 100.0 35 .............................. AGACGATATGCAACGCGTCACCGGTGCGAAAAACG 214863 30 100.0 36 .............................. CATGCTTTTTGGCAATCAGTGGTTGCTCAGTTATTG 214929 30 100.0 36 .............................. TTCAGTGTGCTTGTTGTAACATCACTTTTCTGAAAC 214995 30 100.0 36 .............................. ACTAGCATTTGAGCAGTGTCTGCGTCATAAATATTC 215061 30 100.0 36 .............................. TACCTCCTTATTTCTTTAGATAGCTATCTTTAAATC 215127 30 96.7 36 .............................G CTTGAACGGAGAATTGAGCAAATGCAAGATTGGGTT 215193 30 86.7 0 ........C....A..........A....A | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.6 36 GTTTTTATTTAAAGAGTATTGAATGTAAAT # Left flank : ACAATTAGGCAAGCATACGAGATACTGACAACACCGATGCGTGAATTAAGTAAAAATGGTAATGAAAATCCTAGAAATATGAAATCAGCGGCGATTGTCACGATAAAGAATTTTTTAGTGCCAATTTCTAACTATCAGTATAAAAAACTCAAAGATAACAATCGGATTGACCTTGACCGATTAGCAAAAAAGCAAAGCAATTTTCATTATTTGATTGCTGATGTTCCATATGATGATGAAATTGGTTTGCAAATGCCAACAATTAATGTTAATGATTTTGTTAACGAATATTCCAATATTTTTTAGCTAAATTTTGTTTTAAATATCTGTCGATGTTCATTACCGTAAATTTATCAAGAGATCGACAGACATGGAAAACATTGTTATTTTAGGAATTGTTCAGTAAATATTGGACTGAGCAATTCTTTTATAGATAAATTTTAAAGATTGACAGATTCTATGCTGCGGTTCCATCTAGAGTAAGGAGTTTTGGAACCGTG # Right flank : ATGAAATACCCATATGGAGGCGAGGGGACCTGATGCCATTTTTTTAACATCATTGAATCACTAGTCTAGTAAGGTCTAATCGTATTTCTTTTGCGAAATATGTAAGCGTGTTAAACTTTGGTTAGAAGGGGATGTATTTGAAAAATATGGCGCCGTCATCGGATAATAATTATCCCCATCTGTATGAATAATGACCAATAGGAGGGAATCGCTTATGACTAAAGTAGGCAAGGAACTATTAATGCAGTTAAAAGAGGCGACGGGACCTTTTGTAACAATTATGCTTAATACTCCCGCGGATCATCAAGGTGTTGAAAAAGCACAACTTAAATTTAAGAATTTTGCTAAAGAAGCAAAGAAACGTTTTGAAAAAAAATATCCTGATGCTAATTGGGAAAGCTATCAAGCCAAACTAGATGCATTAGCAACAGATCAGTCTTTTTGGCGTAGTGCTTCAACAAGTGTAGCGATCTTTTTAACAGAAAGTGACACATTGGTTC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAAAGAGTATTGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //