Array 1 30756-29948 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXU01000033.1 Acinetobacter junii strain TUM15545 sequence033, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 30755 28 96.4 32 ......A..................... GTGGTGCCATTGTGAAACGTCAGGCTCTTGAC 30695 28 100.0 32 ............................ AAATGAAGCAAATCCCGAAGCTACTGACCTAT 30635 28 100.0 32 ............................ AAAATGGGCTTACTACAAAACTGGCAAACAAC 30575 28 100.0 32 ............................ GCTTGATCTAGTACCCGCTTCAACTAAGGCTG 30515 28 100.0 32 ............................ TTCAAGAACATTTTTTAGAAAGCCTTTTTGTG 30455 28 100.0 32 ............................ ATCAATCCGCAAAACAGGTAAATACGAAGCAC 30395 28 100.0 32 ............................ TGTTGCGTGATTCTCACCCACGTTCTTAGCAA 30335 28 100.0 32 ............................ ATTTACTTTGAACCCGATGCACAAGACAAATT 30275 28 100.0 32 ............................ ATGTTGCCACCGTTAAAATAATTACTGGAGTC 30215 28 100.0 32 ............................ TAAGACATGGACAAAAGAAACTGAATTAGCAA 30155 28 100.0 32 ............................ AACCATTTGATCAAGGGGTATTTTATCCATGA 30095 28 100.0 32 ............................ TCAAGTTTTAATGATCTTGAGGGCTTTTAAGG 30035 28 100.0 32 ............................ CAGCATAACTACCAGTCGCCTTTGGAAGCAGC 29975 28 92.9 0 .......................T...G | ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.2 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TTAGAAAAAGTTCATGACGCATTACTCCTCTTGAATTT # Right flank : TATTATCTTCAGTAATACTTATGCAAACGAGAGTTTCTGTAAATAATTTTTGTAATAAAAAAGCCAATTATCTCAGTAAGATAATTGGCTTAAGCAAAGAGTTTGGCTATCCGCTTATTCTTCGATCATCCCAATAACACGGCACTACAATCAAATTATTTTCATGTAACCGAGACCATAATCTTACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGCAGGGTAGATTTCATATTGTCATAACGACTATACAAAACCTTATGCACCATCTCCAGGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCTATGACCAATAAATCAAAACTAGAGAAATGGTCGATAACTTCCTTCTCAGAACGTGAAGCATCTGACCAGGTGTCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGCGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 39-246 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXU01000326.1 Acinetobacter junii strain TUM15545 sequence326, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 39 28 96.4 32 ......A..................... GTGGTGCCATTGTGAAACGTCAGGCTCTTGAC 99 28 100.0 32 ............................ TGATCGTCATGTTTTGCATTTGGAAAGTTTCT 159 28 100.0 32 ............................ TTATCTCAAGAATGTTTTTAGAACTAATATTC 219 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TAGAAAAAGTTCATGACGCATTACTCCTCTTGAATTTCG # Right flank : GATGCTTCTACTTGGAGTGTAATTTGCGGAGCGTTCACT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 38-185 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXU01000538.1 Acinetobacter junii strain TUM15545 sequence538, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 38 28 100.0 32 ............................ AAATAAGGAAATAAAAAAGCCCGCATATAAAT 98 28 100.0 32 ............................ GTATCGTCCTGAATTAAATGCATCTAAATCAG 158 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : AGAAAGATGCTTCTACTTGGAGTGTAATTTGCGGAGCG # Right flank : GCGTATTGCAGCCGAGCAACAACGTGATACAGGTTCACT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4456-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXU01000056.1 Acinetobacter junii strain TUM15545 sequence056, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4455 28 100.0 32 ............................ ATAGTGAATGATGCACGGAACTTTTTCAGAAA 4395 28 100.0 32 ............................ ACCATACAGAACTTGAGAAATTATTAGGTGTT 4335 28 100.0 32 ............................ ATTCTTGCACCAACTCTAAAAATGGCTTCATA 4275 28 100.0 32 ............................ TAATTACACCATCAGCTTGGGAGGGTGTCAGT 4215 28 100.0 32 ............................ TAGACGCAAAAAAGGCTTTAGGTCGGCGCCAT 4155 28 100.0 33 ............................ TCTTAGCGTAATCGTAACCCTAATTACTTTTCT 4094 28 100.0 32 ............................ ATAGGACTGAATCAAAAAATGTTTCTTGTGAA 4034 28 100.0 32 ............................ AAACACAAAAGGAAATTGCTCCCGGTTTCTAA 3974 28 100.0 32 ............................ ATTCTGCAAACTCTTTTGAATATATGCAGCAG 3914 28 100.0 32 ............................ TCAGAACCTGTATTTGATTGGCAGCTAATGGA 3854 28 100.0 32 ............................ CGTACTACGCTGATGCATTAGCTAATGAGCCT 3794 28 100.0 32 ............................ TAGATCTGGGCGATGTATAGTCTGATCACCAT 3734 28 100.0 32 ............................ GCCTGAGAGTTTGAGCTATTCTAATCTGACAC 3674 28 100.0 32 ............................ AACCGATAAAGCGGATTATTGCCGCTCGCTGT 3614 28 100.0 32 ............................ GACTGGGTTTCTAGTGGGTTTTCTGAATTATC 3554 28 100.0 32 ............................ ATTTCAGCTTTAGTCATTAGGGTTAAATTTTC 3494 28 100.0 32 ............................ AGTTGATAAAGACATGACATTGAAAGCAATCA 3434 28 100.0 32 ............................ CCATCTACAATTCCCCACCAATCACCATTAAA 3374 28 100.0 32 ............................ AACCGATAAAGCGGATTATTGCCGCTCGCTGT 3314 28 100.0 32 ............................ GACTGGGTTTCTAGTGGGTTTTCTGAATTATC 3254 28 100.0 32 ............................ ATTTCAGCTTTAGTCATTAGGGTTAAATTTTC 3194 28 100.0 32 ............................ AGTTGATAAAGACATGACATTGAAAGCAATCA 3134 28 100.0 32 ............................ CCATCTACAATTCCCCACCAATCACCATTAAA 3074 28 100.0 32 ............................ TATTCAGACTGGCAAGATGAGTTAGGATTGCC 3014 28 100.0 32 ............................ TTTCGGTGATATTCTAACGCTCATAGAGTCAC 2954 28 100.0 32 ............................ TTTCGGTGATATTCTAACGCTCATAGAGTCAC 2894 28 100.0 32 ............................ AAAGTGGATGAGCTGCAAAAGCGGGTGGATGA 2834 28 100.0 32 ............................ TCGATCAGTAGAAAGTCTGCAATTTCCCAAGA 2774 28 100.0 32 ............................ TTTGATTTGAGATGAATATCGAGAAGCACACT 2714 28 100.0 32 ............................ GTTGGCAAGTGCTGCACCTGCTTGAGCAGCGC 2654 28 100.0 32 ............................ TTTGGTTGCCCCTTACGGGGCTTTATTTTTTA 2594 28 100.0 32 ............................ AGTAGCAGATGCATTTTGCAAGATGGCATTTT 2534 28 100.0 32 ............................ AGCCAATTCAGGGTTAAGCACTTCCACGTTCG 2474 28 100.0 32 ............................ TGTCTTGGGTGGTGGTGTTGGCACGTCGGCAG 2414 28 100.0 32 ............................ AACGATAGCAGAAATCCACTCATACGCCCGTA 2354 28 100.0 32 ............................ TATAAATTCTTCAACATCATGACCAGCTAAGT 2294 28 100.0 32 ............................ GACCACTCCCAACCACCTACAGGTGGTAACTG 2234 28 100.0 32 ............................ AGCACATAAGAAAACTGAGAAATCGTTATGCT 2174 28 100.0 32 ............................ AATCTTTACGCCGTTTACGATTCTAATGTTTG 2114 28 100.0 32 ............................ AAACACGCAATCAATTGTTGGGCGTTGGGAGA 2054 28 100.0 32 ............................ AAGATGCAATAGGTGAGTTGTATTTCTTAACT 1994 28 100.0 32 ............................ AGTTAAATACGCCGTTGTCTACATTGGACGCT 1934 28 100.0 32 ............................ GCCACTACGTTCAGAAAGTATGCTACAAATAA 1874 28 100.0 32 ............................ ATGCACAAATCATTAGCGGCTTTGATTTAATT 1814 28 100.0 32 ............................ ATAATATTAGCTAGCGTCTCGTCTGCAATATC 1754 28 100.0 32 ............................ AATTGGAACTGGCTATTTAAGAAGATTTGGAA 1694 28 100.0 32 ............................ AACGCATCTGCGCCCATAATGCACTGGGATAT 1634 28 100.0 32 ............................ AATGGTTTCAGCCTGCATCGTGAGGATAGATA 1574 28 100.0 32 ............................ AACTGGAGATTAGAGATGGAACAATTTAGAGT 1514 28 100.0 32 ............................ TTGTGCTAAAAAATTAATATGAATGCCTAGCG 1454 28 100.0 32 ............................ ACCACCATATCAAGAAGAAGATTTGATTAGCA 1394 28 100.0 32 ............................ CATAGCAATCAACTTGCATGGTGCCTTGAATC 1334 28 100.0 32 ............................ ATATCGGCTCAATTACACTAAAACCCTCTAAG 1274 28 100.0 32 ............................ AACTATCATCTTTTTTGCTGTTGGTCTGGCTT 1214 28 100.0 32 ............................ ATTTAGCCATCTGTCACAAACTATAATCCCTC 1154 28 100.0 32 ............................ TTAAAGTTGACTTCGAACAAGAATCAGGCTTT 1094 28 100.0 32 ............................ TCATTAACTCGTGATTATTATAGCAATGAAAG 1034 28 100.0 32 ............................ TTAAAAAACTGGTTGACGATGAAGTTCAATGC 974 28 100.0 32 ............................ GTAATACTCCTAGAGTGTCTTTGATGCTCTAG 914 28 100.0 32 ............................ TATAAACGCCTTTAAATGATCACCGCAAGGGT 854 28 100.0 32 ............................ TTTTCAAAATATTAGATTTGCTCTGAGCACTG 794 28 100.0 32 ............................ ATGCTGTTGAGCTTCTTAGTATGCTGCCGGCC 734 28 100.0 32 ............................ ATTTACCAGAAGCCATAAAGTGCGAGTTACGC 674 28 100.0 32 ............................ GTATGAAGTAGAAACAGCCCCTACCCGTATGG 614 28 100.0 32 ............................ AATGAAAGCGAAAGGTCAATGTCTTGATTGGA 554 28 100.0 32 ............................ GTATCGTCCTGAATTAAATGCATCTAAATCAG 494 28 100.0 32 ............................ GCGTATTGCAGCCGAGCAACAACGTGATACAG 434 28 100.0 32 ............................ AAGTTCATGACGCATTACTCCTCTTGAATTTC 374 28 96.4 32 ......A..................... GTGGTGCCATTGTGAAACGTCAGGCTCTTGAC 314 28 100.0 32 ............................ TTATCTCAAGAATGTTTTTAGAACTAATATTC 254 28 100.0 32 ............................ GATGCTTCTACTTGGAGTGTAATTTGCGGAGC 194 28 100.0 32 ............................ AAATAAGGAAATAAAAAAGCCCGCATATAAAT 134 28 100.0 32 ............................ GTGGTGCCATTGTGAAACGTCAGGCTCTTGAC 74 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 74 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : CTGGACATTCGACGTTGGCTTGAGCGTTTAGAAGATTATGTACATGTCACTTCTATTCGTGAAGTACCTAATGATATTAAGAACTATGCCATTTATAAGCGTAAGCAAGTGAAAACCAATGCACAACGTTTGGCGCGTCACCGTGTAAAACGTGGGGATATTGGCTTTGATGAGGCATTAGCCAGATACAGCAATGTAGTTACGACAACCAACATGCCTTATATTGAAATGAAAAGCCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAATCTGCTGAAAAATCTGAAACTCAGGTTTTTAGCACTTATGGATTAAGTTCGGTGTCATCTGTACCAGAATTTTAACCCAATATTTTTATACTCTTTAACAGCTTAATAAAATCAATAGCTTATGATAGTGGTTTAAAACTTGGGTCTTTTGAGAGATTTAAGAGTTAAATCACTGTTATAACTTTATTTTTTGCTTTAAAATTGCT # Right flank : AAAATGAAGCAAATCCCGAAGCTACTGACCTATGTTCACTGCCATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //