Array 1 30339-27134 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFSU01000006.1 Sandaracinobacter neustonicus strain PAMC 28131 ctg7180000018312, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30338 29 100.0 32 ............................. GCGCAGAATGTGATCCGGCGCGGGCGCCTGGC 30277 29 100.0 32 ............................. AGATTGCGCCCCGGCTGAAGGATTTGCAGGCG 30216 29 100.0 32 ............................. TATGCCTCGCCCACGACAGGCGGGCGTTCATC 30155 29 100.0 32 ............................. CTATATGCTGCCATCGCCATCGGTGCTCTGTT 30094 29 100.0 32 ............................. TGAGCGACTATCAGCAAAACGTCGGCAAGTGG 30033 29 100.0 32 ............................. AGAAAAGCGCCGTCTGGTTGCTACTGGCGTGG 29972 29 100.0 32 ............................. GCCGTCCACCCGCGCGTCCTCCTCCGTCGTGA 29911 29 100.0 32 ............................. GTCTGGCCGCCCTTCCATCCGCGCCGAAAGCT 29850 29 100.0 32 ............................. GCCCCCACGATTCCACCCACGATATACACCTT 29789 29 100.0 32 ............................. TGGCGTCCCGGCCCGACCGAGCTGCTGGCCTA 29728 29 100.0 32 ............................. GTGGGTGCGGCCACGCATCCGAACGGTGCGCG 29667 29 100.0 32 ............................. CTCATGCTTCGCCGACCGGAACTTCTCGGAAA 29606 29 100.0 32 ............................. CAGTTGATGCGCATGTTCGCCTATGCTGTCCG 29545 29 100.0 32 ............................. GACCGTGGCATCCGAGTCCTGAACATGTCCCC 29484 29 100.0 32 ............................. GAACTGATCGACGTTGGCGGGGCCACGTTCGA 29423 29 100.0 32 ............................. CTATTGCAGCCTGTCAGGCCTTCGTTGCCGGT 29362 29 100.0 32 ............................. GTCACGCATCGCAGGCTCAAAAACCCCACAAC 29301 29 100.0 32 ............................. AACTCGCACGCTACCGGGCGCAGCCGCGTCAG 29240 29 100.0 32 ............................. AACTGGATCACGTTCCGCCGGGCTTCGTCCTT 29179 29 100.0 32 ............................. GCTGCGAGCGGAAAATCGGCAACTCAAGGCGC 29118 29 100.0 32 ............................. CTGCAATGGGACCATCAGCCGTGCTAGGGTTG 29057 29 100.0 32 ............................. GCGCTGACAGATGCTGAGAGCCGCCTTGACAC 28996 29 100.0 32 ............................. CGGACAAGAGCGGCCTCCCTTGTGGTGTCGGA 28935 29 100.0 32 ............................. GCGAACGTGCCAACGCCCTCGATCCGCAGGAC 28874 29 100.0 32 ............................. CGCGAGACGACTGCCTGATCCAGAGTTTCGCC 28813 29 100.0 32 ............................. TTCTCGGGCGAATAGAGGCGATCCTGTCGATC 28752 29 100.0 32 ............................. TCCTCCTTGTTCTGGCGGCAGGCTTCGTCGGC 28691 29 100.0 32 ............................. GCCGGTCTGTTGCTGGTTGCCCAGCACATTCA 28630 29 100.0 32 ............................. TCCAGACGCGTCGGCACGCCGTCGCGATCACC 28569 29 100.0 32 ............................. CCGATCAGGCCGCCTTTGACGCAACAAAGAGC 28508 29 100.0 32 ............................. TCCAATGCTGAACTCAAGGCTCAGGTGGAAAC 28447 29 100.0 32 ............................. GCGACCTATGAGCAGCGGCATCTGCGGGGCAA 28386 29 96.6 32 ............................T GAACGCCACGAAGCGCTTTCGCCGGTTCGCGC 28325 29 100.0 32 ............................. GTTTACACGGAAAAAGCCCGCGAAGTTGTGTT 28264 29 100.0 32 ............................. CTCGCGCGACGGGTAACTATGCCGCCGTGGCT 28203 29 100.0 32 ............................. GGCTATCCGTTCAAGCGCGCTATCCCGGTGGA 28142 29 100.0 32 ............................. GTCGAATGGCATGCGCTGAGCGATCAAGCCGC 28081 29 100.0 32 ............................. CTCAGCGTCAGCGATGATGTCAACATCACCGG 28020 29 100.0 32 ............................. TCGGGGCCTTGCCCACTCCACGCCAGTAAAGG 27959 29 100.0 32 ............................. GCATCCTTCAGCATGCTGCCGGATTCTTCGAA 27898 29 100.0 32 ............................. GCCGGAACCTTCAGCGGCTCCAGACTGCAATT 27837 29 100.0 32 ............................. GACGGCTCCAATCATAACAATTGCGGCACTGG 27776 29 100.0 32 ............................. CAGGCGATAGCAGCCGGTGGCATCAACGCCCG 27715 29 100.0 32 ............................. ATCAAGGCCGCCCTCGCGCTGCTGTGGTGGGG 27654 29 100.0 32 ............................. CGGCTGACAACAAAGATGCCCTCGCGCATGTC 27593 29 96.6 32 ............................T GGTGCGGGCCGTGCCGTTTACGGTGACAGTGA 27532 29 96.6 32 ............................C TGCCGACGATCTATCGAAAACCATGCACTGGC 27471 29 100.0 32 ............................. CGGTTCGCAAAATGCTGCCGCCGCAGATCCGT 27410 29 100.0 32 ............................. GTTGTGGATGCCGTCCACAACATGCGAAACGT 27349 29 96.6 32 ........T.................... TGCGGGTAAACATAGGTATCGACGTAATAATA 27288 29 96.6 32 ............................A TGCTGGTGGTCGTAGCTGGCATAGTAGCGGGA 27227 29 100.0 32 ............................. CCGCCAATGTAACGCAGGCGAAAGCCGGGGCG 27166 29 96.6 0 .............G............... | CC,GG [27139,27144] ========== ====== ====== ====== ============================= ================================ ================== 53 29 99.6 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GCACCGGCCTGTTGGCCAAGATCATTCCCGCCATCGAAGATGTTTTGGCCGCGGGAGAACTGGCCCGGCCGGAGCCGCCGGAGGATGCATGGGGGCCGGCATTCGACGATGCGCCTGCTTCGGGTGACGAAGGGCATCGGGGATGATGGTGGTTGTGCTGAACAATGCGCCGCCCCGGCTTCGGGGCAGGCTGGCCGCATGGCTGCTGGAGGTGCGGGCCGGCGTGTATGTGGGTGATTATTCGGCCCGGACCCGGCAGCGGATATGGGAACAGGTGGAGGCCTACATCGAAGCGGGCGATGCAGTCATGGTGTGGAAAGCGCCCACCGATCAGGGCTTCGATTTCCTGACGATCGGCCGAAATCGCCGCGCACCGGTGGATTTCGATGGGCTGAAACTGGTTTCTTTCTTTCCAGAAAAGCCCGGGTGAACCGGCTTGTTAATCCGGTAGGCTATTTGACATCGTGAATATTCTGTAATTACAGTCATTTCCGGAAAGA # Right flank : TACAGATCCTGCCGGGTCACAACCGGACCGAAAATGCCGCTTGCTATCTCGGCGTCGATGCGTTGATCTTGGCAGGAGCCCACGGCCTGTAACCATCCGCCCTGCGTCGCTCACAATATTCGGCGGCAACCAGCTCGAACGTGTTAGTCGCGAGCAGCTGCGCTTCCTGAATTGCCTTCTGTTTTTCCCGTACCGGGTCTTTGTGTGCTGCCAGCTGCTCCTTGGCCGCCCCGCTCCTTTTTCGGGCTTCCCGAAGGCTGATATCCGGGTAATTACCGATGCTTAGCTTTCCCTCGCGGCCAAGCCTCCGGTATTTTTGTCGCCAGTATTTGGAGCCGTTTGGCTGCACCAGCAGATACAGGCCCCCGCTATCGGTCATTTTATACGGCTTTTCACGCCCTTTTGCGGCCCGAATTGCGATTTCCGTGAGTGCCATAAGAAATTGAACTCCCACATAAAAACCTCGATTTGGGGGCCACGGAATCGGGAGGCAAAAAGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //