Array 1 28318-28984 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOAG01000020.1 Myroides indicus strain DSM 28213 Ga0196853_120, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================================================================== ================== 28318 35 100.0 31 ................................... TAAATTCAATTCGTAGATGTCTCTATCGTTG 28384 35 100.0 31 ................................... CTCAGTTCGTAGCTGAGTGACAACAACACTG 28450 35 100.0 31 ................................... CAAAGTCGGATCACGGATTTATTAGCCGAAG 28516 35 100.0 31 ................................... ATTTACTTTTCTCGATCCACAACCGAAAACG 28582 35 100.0 31 ................................... CCGTTGTGTTTTACTCTATATTCCGCATCTG 28648 35 100.0 83 ................................... GTTCTTGTCCACCTCCTTGCATTGTGTGAAGTTGTAACTACCTTTATTTTATTCATGTCTTTTTAGTTTTTACATTAAGGAGT 28766 35 71.4 31 .CA.G.A.G.TA.GTA................... ACTTCAACATCCGGTTTTTTATAACACATAG 28832 35 97.1 83 ........G.......................... TAGCTTGTACAGCTTGTACACGCGCTTGTGGTTGTAACTGCCTTTATTTTATTCACGTCTTTTTAGTTTTTACATTAAGGAGT 28950 35 68.6 0 .CA.G.A.G.TACGCA................... | ========== ====== ====== ====== =================================== =================================================================================== ================== 9 35 93.0 44 TTGTAACTACCTTTATTTTGAAAGGTAAACACAAC # Left flank : TTTGGTATAGCTTTAAAGCCATTTAGAGAATTAATACACAATGAAAAAGTAAGTCTAACTTCTAAGATTAGAGAACAAGTTTTAAAAACAAATTTTCTGAATGAAAATAAAACTGTAGCGGAATTAAGGGAGTATCTATTAAAATTAAAGTTAATTGATAAAGATATAACCTCAACTGATATAGCAGGTGTAATGAGAAGTCTTTTAAAAGAAGGAATTGTAACTGCTACAAAACAAGGACGGAAGAATTTGTATTTGAAGAAATAAATGTTTTAGCAATAATGTACTTTAAAGTAGGAAACATGATTTTGAAAACTCTTAGCTATGCTGAGAGTTTTTTTGTTTTTATAAGTGGTATATTTGACGAGTAATCTTATTAAAAAAAAGAAATTACAATTTGTTTTTTGCTCCTTGACATACTTTTTTTCAAGATATTTGTTCGTTTTTTTATTAAAAAACAGGCTTTACCTTTTTAATAAACAAGGAGTTATATTTAGAGG # Right flank : CCAATAATATTGTATGATTATTTATTTAAAATCCTGCGTTCCAATAAAAGCCCTATCAGATTTTGATAGGGCTTTTATTTTTTTATTTGAATGTGACTTAGCTTAATTTAGGTTTGAAGTTTTTGAAAATAATGTTAAATTTGAAAAGATAGTTAGCTTAATTAAAATAAAACGATGAGCTAATATTTATATAACCGTAACTAACGAAAATTAAATAAATATGGAAAATCAGGCAAGCAGAGAAAAAACTAATTACAATTTAAATGAAACACCTTGGTATTTTGGAGCCTATTTAAATATGGCAAGGCACAATATGTTTGTTTTAATAAATCACCTTACGGAAAAATTTAAATATTTAGGCTTTAACAAAATCGATGATGATTGTGAGATAATAAAAGATAACATTTTAACTTCTATTTTTAATCCAAATAACTCAAACTATGAAGCGGAGCGTTTTAAAGTGTATAAATATCTTGTAAAACGACATTATTTACCTTTTG # Questionable array : NO Score: 4.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.99, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGTAACTACCTTTATTTTGAAAGGTAAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 32736-33465 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOAG01000020.1 Myroides indicus strain DSM 28213 Ga0196853_120, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================================================================== ================== 32736 32 100.0 34 ................................ GATGCAACTTCTTGGTTTTCCTTAACTTGTGTTG 32802 32 100.0 34 ................................ AATCCCCAATTGCTTATATAAAAAACCCAAGTTG 32868 32 100.0 34 ................................ AGTCCGGAGAAATAAGCGTACACGTAAAATGTTG 32934 32 100.0 34 ................................ ATAACGGAGCTAGTTCATCGCTTAGTTTGTGTTG 33000 32 100.0 34 ................................ TTATCGTTGTCTTTTTTAAATAAAATGACAGTTG 33066 32 100.0 86 ................................ ATCTATTCCTGTGTGCACCCTGAACTCTGCGTTGTAACTGCCTTTATTTTATTCACGTCTTTTTAGTTTTTACATTAAGGAGTTCA 33184 32 71.9 34 .G.A.A.TGCGTA................... CATATTCATAATCAACTACATTTCCGGGCGGTTG 33250 32 100.0 34 ................................ CTGCTTGTTTCTGTTACCGGGTTCTGAGCTGTTG 33316 32 100.0 86 ................................ CTAACAAGATACCTTACCTTCCGCCTGCTAGTTGTAACTGCCTTTATTTTATTCACGTCTTTTTAGTTTTTACATTAAGGAGTTCA 33434 32 68.8 0 .G.A.ATTGCGTA................... | ========== ====== ====== ====== ================================ ====================================================================================== ================== 10 32 94.1 46 TAACTGCCTTTATTTTGAAAGGTAAACACAAC # Left flank : TAAAATTAGAAGTGCTGTTTTTCAACAAACATTTGAACTAGAAGAATATATTGCCACAAATGATTTGGAAAATTTAATTAATGAAGAATTTAAAAGAAGAAGAGATTTTGAGGAGGTTCAATTTAAAGTATATCTTAAAGTATTAGAAAACAAGACAGATTCGAATACAATCGAAATTTTGCAAAATATTCGTAACAAATTCTCACATTCTGAATTTCCAATCTTAGATGAAAAGGAAACAATAAAAAAAATCACATCAAAACAGATAGATACTTTTGAAAAAGAAAAACATAGAAAAGGAGGAGTGGAAAGTTTAGACTTATCTATAAGTACAAAATATTTGGCTTTATATACCGAAAAAATAAACTCCATAATTAAGTAATAAACACAGGATAAAAAAATTGCTCTTTGACATACTTTTTTCTATGATATTTGCTCGTTTTTTTATCAAAAAACACGCTTTACCTTTTTTATAAACAAGGACTTACAATTAGAGGTTG # Right flank : CTTTATACACGTTTTAGACATCCCCATTCTGGTGCAAGTAAACAGGTGAAGCAATCTTTTTGTGTGCCTATGTATAAGAACACGCTCAGTTATACTTTGCCTTGTGCTCAAATTTTAAAATCAGGGGGATATAGGTCTCTTGAAGATAAGGGCTGGCTTGGTGGAGTGTTTCAGATAAGTTGCTTTTTTTATTCCTTTGTCCCCCGTGTTTGCCTTGTCGCCCATATTATTAAGATATCACAGGCTTTCAGGTTCTACAAAAACAAAATATTTTAGTTCATAGTTTATCAGTATTTTCTCCTCACTCTTATTAGACCCTTCTTGTACCCTTCTTCGACCTTTCTTCGGGGATCCTTCGACAAAACTACCATTTTTCCGAAGCGCAGTCGAAGTAATTCTTTTGTATGTCTTTGTATAATAATACTCTTGGCTATGCTGGGGAGTTTATATTCATAAAAAAAAGGATAGTGAAGCTATCCTTTCTCCATTTAACCATTAAA # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.94, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAACTGCCTTTATTTTGAAAGGTAAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //