Array 1 123152-124583 **** Predicted by CRISPRDetect 2.4 *** >NC_017117.1 Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-010, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123152 29 100.0 32 ............................. CGGTCGATATTAAGGCGGAAGAGGGGGAGGCC 123213 29 100.0 32 ............................. CCGAGGCAGATAGAGCTGTGGAATGTGTCATG 123274 29 100.0 32 ............................. CACGCTCTCCGTGCCTCAAATCCATTGTGAGA 123335 29 100.0 32 ............................. ATAGCGGCACCTGCGCCAAACCCCATTTTCAG 123396 29 100.0 32 ............................. TTCAGCGTTTGGCCATCAGCAAAAACTACCGT 123457 29 100.0 32 ............................. CGGGGCGGCTGTTGGTAATGCAGACAATCCGT 123518 29 100.0 32 ............................. TCGCCCACGGCCTGCCAAGACTTGCTCACTTC 123579 29 100.0 32 ............................. GCGGTGGATAGGCCTTCCATATCTGGCAGGTA 123640 29 100.0 32 ............................. CCCGCGTAGCATGTTTGCGCGTGCACCGCCTG 123701 29 100.0 32 ............................. TCGGGCGTCTGGCCGGTCGCTGAGGCTCTCAA 123762 29 100.0 32 ............................. CCGCCTGACCGTCTGACCTCCTGACCGCCTGA 123823 29 100.0 32 ............................. GCGTATCGGTCACAAATGCAGAACCGGCTGGC 123884 29 100.0 32 ............................. ACGCGCGCGGCGGGTAGTGTAAAGAACAGCGC 123945 29 100.0 32 ............................. CCCCGACCGTTGGCAATATTACCATCACGCCT 124006 29 100.0 32 ............................. ATATTTGGACAGTTCGCCCCGGCTGGTAATGT 124067 29 100.0 32 ............................. TCGCAGCGGAAATCATTGTTGGCAATAATGCC 124128 29 96.6 32 ............................A CGTGGCCCATGCATTCTTCTCTGGTGACGAAC 124189 29 100.0 32 ............................. TAACAACAACCTAGCCGCCGTGGTAAATACCA 124250 29 100.0 32 ............................. CAGCACAAAGCCAGAGACCAGAAGGTTTATGC 124311 29 100.0 32 ............................. ATCTTGGGTTTGTTGACTTCCGGCATCGTGAT 124372 29 100.0 32 ............................. AACAGCCCCGCATACCGGCGCATATTGACGCA 124433 29 100.0 32 ............................. AATTGCCGGGTCTGGCCGCTACCTGCAAACTG 124494 29 100.0 32 ............................. GCTAAAAATGGGTGATTCCAAAACCAAAACTA 124555 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TATTGGCTGCTGGTGGAACTGAGGCACCATCCGTACAGCCTGAAGCAATGCCGGTTGCTTTCGCAGATCCGAAAGGTTCGGGTGATGTTGGTCATCGTGGTTGAAAATGCTCCGCCACGTTTGCGTGGGCGGTTAGCTGTATGGCTTCTGGAAGTGCGGGCTGGGGTTTACATTGGCAGTTATGGCCGGCGTGTGCGTGAAATGATATGGGGGCAGGTTTGCGCCTATATTGAAAATGGCAATGCTGTGATTGCATGGGCGGCCCCCAATGATGCTGGGTTTGAATTTGATACCTGCGGTAAGAATCGTCGCGTGCCTGTAGATCTTGATGGCTTGCGTCTTGTTGCTTTTGGGCCTGAAGCCGCTCTTCCTATACATCCTGGACCAACAACGACAATGCTTCCAAGGCGACGTGGAAAAGGGTAATATACCAACTCCATTCAGTTGGTGGTTTCTTTGACAATAGAATAATTCTTTAAAATCAACTATCTTCACGAAGA # Right flank : GACGCCTAACATGTCTAGGTGTTTGGTCCCGGGGTTTGATGGGTTGGATTGATGATGAATCTTTCTGGCTCTGAAGTCCATATTTTGCAGAGGTATTCGTAAGGCGTGAGGCCACTCAGCGTCTTGAGCCTTCGCCCGAAATTATAAGCTGCCATGAAGTCGTTGAGGTGTGTCCTCAACTGCTCATGACTGTCGTAATGGAAGCGTTTGACGGTTGCCTCTTTGATTGTCCGGTTCATCCGTTCAACCTGACCATTGGTCCAGGGATGATTGGGTTTCGTCAGACGATGTTCGATCCCGTGGGCTTCGCAGATCATGTCGAAGCGCATGGGACGCGACCAGGCCGTATTGCGATTACGGGGTTGGTCAGCGAACTGGATCCCATTGTCGGTCAGGATGGTGTGGATCCGGTAAGGGATGATGCTCAGGAGATGTTCGAGGAATTCCCAGGCCGTCTTCCGATCAGCTTTCTCGACCAGTTGTGTGACAGCGAATTTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //