Array 1 36487-37775 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRVW01000074.1 Pseudomonas aeruginosa isolate G, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36487 28 100.0 32 ............................ ACACGGGTGACTATGCGTTTACTAGCCATAGA 36547 28 100.0 31 ............................ GCTGCCGGACGAACGCACGGCGCTCCAGGTC 36606 28 100.0 32 ............................ TCGACGTGCTGGATATCCCTGCTCGCACTCAG 36666 28 100.0 32 ............................ TGCAGCGATTGCACCTTGGCCTGCTGCCGATC 36726 28 100.0 32 ............................ AGGCCAAGGCACATTCAGCGTCGCCGACCCGC 36786 28 100.0 32 ............................ ATTGGACAGCACTACCCAGCACTCGGCAGGCT 36846 28 100.0 32 ............................ ACTGTATCGCCGCAAACGAGCCCGTTCTGGCA 36906 28 100.0 33 ............................ AGTTGATATCAAGATGCCGTGCGGCTCTGTATT 36967 28 100.0 32 ............................ TCGCCCATCAGCCAGATGCAGCGCAGCGTCAA 37027 28 100.0 32 ............................ ATCCATAGAGCACGCTGTTGATGCGCACATGG 37087 28 100.0 32 ............................ ATAGAGGCCGAAGCTGTAGCCGGTGAAATCAA 37147 28 100.0 32 ............................ ACACCAAGAGTCGCGGCGACAACTACCAGACG 37207 28 100.0 32 ............................ TGCGGACCCGCGCCGAGCAGATCGCCGCGACG 37267 28 100.0 32 ............................ ACTGGAGACGAGCGCATGCACGACCCTTTCAA 37327 28 100.0 33 ............................ GACCAGGGCGTCGACAGCCGCAATCTCCATGGC 37388 28 100.0 32 ............................ TGGTAGGCCGAGCGGACAAAGGCGGTGGCGTG 37448 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 37508 28 100.0 32 ............................ TGGTTCCGGCTCAAGCAGCGCAAGGAACTGAG 37568 28 96.4 32 ..............C............. TTGGGCTTGGGAGTGCTGCAGTTAGACCTGCC 37628 28 100.0 32 ............................ AGCAGTTCGAATTCGTCATCCAGTTCTAAGGT 37688 28 92.9 32 .....................A..A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA 37748 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 98.4 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTGGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGTTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGACGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 48179-46649 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRVW01000074.1 Pseudomonas aeruginosa isolate G, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 48178 28 100.0 32 ............................ GCAAGGGGCGCTTAGGTGACCGAAGGCTGAGA 48118 28 100.0 32 ............................ ATAGACATAACTCCCGTCTGGGTCGGTAGTGA 48058 28 100.0 32 ............................ TCTAACCAAGCTTCGACCCTGCCAGGGCCTCG 47998 28 100.0 32 ............................ TTTCGGCGGAAATTCAACCCCCTGGAGACATG 47938 28 100.0 32 ............................ ATCCCGATCTGGAGCCAGGTGTCGTAGTCTTC 47878 28 100.0 33 ............................ TTGGCAACGACGATCTGCGCCCATGCTTCGAGG 47817 28 100.0 32 ............................ CACTAGGGTACAGGACTGTCGAAAGACTGCGC 47757 28 100.0 32 ............................ TACAAGGACAAGCAGAAACACTACGAGTGGCT 47697 28 100.0 32 ............................ TGATGTCCACTCGCAGTTTCAGTGATGATGAT 47637 28 100.0 32 ............................ CGGAGCAGGCATTGCGGGTGCGGGAATGCTGG 47577 28 100.0 32 ............................ ATTCGAATGAACTCCATGCTCATGGCTCCTCT 47517 28 100.0 32 ............................ CGGCGGCACCACCTGCAGCATCAGCGCACTCA 47457 28 100.0 32 ............................ CAGACCGGCATCGAGGCGCGTCGCGGCCATCG 47397 28 100.0 32 ............................ ACTCTGCGCCAGAGGTCAGCACCAGAAGATCA 47337 28 100.0 32 ............................ TATAACGATATTGATGCCGGATTTAGGCCAAG 47277 28 100.0 32 ............................ AGGTAGACGTCCTCGCCCACACCGATGTCGCG 47217 28 100.0 32 ............................ GCCCAGGCACGTTTGCTCGCGCTTTGATCTCA 47157 28 100.0 32 ............................ GAAAAGAGTTGACTGCACAGTGGGCATCACCT 47097 28 100.0 32 ............................ AATTGCAGGTGACCGACAGGCTTGCGGTACCA 47037 28 100.0 32 ............................ AGCTCGGTCGCCCCGGGGCGGCCGGCGTAGTA 46977 28 100.0 32 ............................ AGGTCGGGGATGGATCGAACCACCCGCGCGAC 46917 28 100.0 32 ............................ GTGCCCGGGGCCGACTCCGAACCCGACGAGCA 46857 28 100.0 32 ............................ TTGTCGCTGATATCGAAGGTGTCCCACTTCCG 46797 28 100.0 32 ............................ AGTAGCCGTCGGCGTTGTGACAAAGCCATTCC 46737 28 100.0 33 ............................ GCACGGTAGGTGCCGGCGCCCACGCCGGAGGCT 46676 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTGGCATCGCCCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCTACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //