Array 1 268048-266683 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJLA01000004.1 Clostridium diolis strain DSM 15410 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =============================================================== ================== 268047 26 100.0 41 .......................... GAATTCCATTTTTGCTAATAATGCATCCATATTACTGCCTG 267980 26 100.0 40 .......................... GAATAACTTGTTAGCCATTTCATATATTATCTTTGCAAAT 267914 26 100.0 40 .......................... GAATGTAAATTCAGAATCATATATTATTTCGAAGTCATCA 267848 26 100.0 41 .......................... GAATTTCCTTACATTATTATTTTATCAAATATTTAATCATT 267781 26 92.3 40 .........T.G.............. AAATTTTCCGTCTGCATCAATGATATGGTATCCAACGAAT 267715 26 84.6 38 ......TA.T......G......... AAATAAGAAGAAATGTCCATACTTATCAAGCTCTATTT 267651 26 96.2 40 .........T................ GAATACGTAAGGACTAGGTTGAAAGTTAGGATCATTATAT 267585 26 92.3 40 .......A.T................ AAACCCTAATACTAATTGACCATAATTATTATACCCACAC 267519 26 84.6 39 ...A.....T......TT........ AAACGTGAATATCTTTTGTTCTTTATGTCTAGCCATTGC 267454 26 88.5 41 .......C.T............G... TAATCTTTGCAAATTATATTGCTATTTTATAATAAGATTGT 267388 26 80.8 63 ......TA.T.....AG......... AGATACATCTACAATTGCGTAAGTAGCTCTCATAGCTTGGAATTATAAACGCAGTTTGATTTG 267299 26 88.5 39 .........T.G...A.......... AAATGCGTTATAGTATTTTTCAATATATGCTATTGCTGG 267234 26 88.5 41 .......A.T......G......... AAATCCACATATAATTTTTACTGGGTGGCCTGAATCTGGTC 267167 25 88.5 39 ........AT......-......... AAATTAATTTTGTATATCGCATATTGACAGATTATTGGG 267103 26 92.3 41 .........T.....A.......... AAATTATTGTTGAGTTACTTTATGTGCTAATGCAGCAATAC 267036 26 92.3 40 .........T...............A AAATGTTATTTCTACTTTGTACTTATATATTGCTTCGTAT 266970 26 76.9 39 .......C.T.....AG.G......G AAATTTTCCGTCGGCATCAAAGATTTGATCAGCAACTAT 266905 26 73.1 37 .G.C.....T..T..ATA........ AAACATGAACTTTCTGAGTTGTCTTTTTTGGAAATGG 266842 26 84.6 42 A........T.T...A.......... AAACTCTTTTTTGAATCTGAAGTAGTAACTTTCTAATTCAGT 266774 26 88.5 40 T........T......G......... AAATTATTTAATAACTGTCCCTGTTTCCTTGTGAATTAAA 266708 26 88.5 0 .........T.....T.........C | ========== ====== ====== ====== ========================== =============================================================== ================== 21 26 89.6 41 GATTAACTTCAACATGAGATGTATTT # Left flank : TATCGTAAATAAAAGAGAGTACAAAATCAATACTTTGAATTTTGAAGAACTAGAATTTGTTTTCTCATGGGTTGGACGAATTATAAAGACTAAAAAAAGTAATGAAAATTATGATAACAAGAATAACAATTTTCATGATAGGAATAAAAATAATAATTATCATGATAGAAATTCTAATAAATTTAATAAATCTAATATAAATAAATATAGCAAAGAGAAAACTAAATCATATTATTCTACAAAAAGTGATAGCAATGAAGGTTTAAGTAGTATGGCAGAGCAACTTATGAAGTGGAAAAGTAAATAATAAAAATAAAGTAAATGAAAAATTACCATCCTCAAAGTCGCATTATTTTTACGAAGCGATATAAACAGAGAGTTTTCAAGGGTTTTATTATAAAATGTTAAATTAAGATATTTACTTGGTAAAAATTTTTGAATGTGTTATTATAACATAAGTGTAGCTATTAGAAGATTATATGAATGGCTTATTTACTTAG # Right flank : AACATAATGAACTTTTTGATTAATTTTATACGTAAATTGATATAGAGAAATTAGGAATAAAATTTATATTTCATAAGGGAGGTGAATAGATATGAAGGTATTTGAAATTTTATTGAAAGTATATTTATTGGAAGATATAGAATTAAATGATTCACAGAATAAAATATTAAAACTAATTGATAAAACGTTAGGTCAAGATGAAAGGACTTTGGAATTACACAATAAGAATGATTTTAAAAATTATTGCTTTAATTCTTTTTATCCTTTAGAGAAAGATGGAATATATAAAGAAGGTAATATTTATACAATAACTATAAGAACTGTTGATAAATATTTAGCAACATATCTTAATAATAAGTTAGCTAATTCATATACATATTCAATTAAAGGATTAAAGGCGGATCTTAGGATAATACCAATAAAGAAATTAAAGAAAATATATTCTATTACTCCACTAGTAATAAAAAATGATGATGGATATTGGAAAAATTTAATAAGCT # Questionable array : NO Score: 4.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.48, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACTTCAACATGAGATGTATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.08%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [27-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 277635-277015 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJLA01000004.1 Clostridium diolis strain DSM 15410 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 277634 30 100.0 35 .............................. TATAAAAAAATACGTGGTAACTCTTACGGTATGTG 277569 30 100.0 36 .............................. AAATGAAATTGACTCAAAAAGAACTATAGTTGGAAC 277503 30 100.0 38 .............................. TCAATAACTTCTCGAACTTTGTTATAGCTCCTAAAGAA 277435 30 100.0 36 .............................. TTGTAATTATATGCGACTGATGTTGTATAATCTATT 277369 30 100.0 34 .............................. ATAGGACCACTTACGGAATAAATAAAGATAAAGA 277305 30 100.0 35 .............................. TAATCTGAATCGTCTTTTCTTATCTCAAAATCTTT 277240 30 100.0 36 .............................. AAATCCATACCAACTTTGGCTGCTGCAACCCCTAAC 277174 30 100.0 35 .............................. TTTTTATCTACTAATTGAACACTCACATTCAAGCT 277109 30 96.7 35 ......T....................... AACTTAGTATAGTCTGGGAATGCGTCCATCTTGAA 277044 30 83.3 0 ......T................A.A.T.C | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 98.0 36 GTTTAAGATTAACATGAGATGTATTTAAAT # Left flank : TGAATTATTTTACATATATTGTGTTTAATGTTAGATTAACCTCTACATATAGTATATATGGTCAAAAGCTATATAACGTATATATGAGAGCAATTTGGAGAAGAAAAATTATTATAAAGGAAGAGCTAAGAATTGATAATGGTAATGGGTATAGCTGTGATGAGTTCTATTAAAGAACAAATCAAGCTAATGAAATGACAAAACAAAAGATATAAAGCTTTATGTGAAAATACATATTAACCGTGATGAGTGGCGAGTTGACGGAAGTAGAACTTGGGATAGTAAATGTTGGATTAATATCATAAGTGGGAGTTATAAAATTATGATTTTTACCAACCTGAGAATTTATGAAATACTTAAAAGTTAGATAAATAGATTAGTGAAGACACCTATTAATTAGTTCAGAAATTATGCTTGGAGGTTGGTAAATTTTCCGAGATGTGTTATTATTACTATAAGGACAAAGAGCATTAAATTATATGAATGGCTTATTTACTTTG # Right flank : TTGTAACTCAAAGATATTAATAAATAATAGATTATTTCAGAAGCAAAAATACAATATGCAAATTTATGGATACCATTGATATAAAATTTATATTAATGGTATTTTTGTTTTTTAAGGAGGAAAAGTGGTAAAATAAGAGAATGCTTAGATTATATGGAAAGATAGAGATGAAGTTAAAATGAAGAGGTGATAATATGTCTAAAAAATTGTTTACGTTTTTGGGCACAACTGACTATAAACCAACGGTTTATTATTTTAATGACGATAGTGTTAGTGAAGATAACTATGAGAAGCTAAAAACACCATATGTTCAACTTTCATTGTGCAAAAAACTTGGATATGATACTGAATTAATCGTATTTCTAACTCCAGAAGCAAGAGAAGCTAATTGGATTTCTAAGGATAAAAAAGAGGGATTACAGGAGATATTAAAAAAGGAAGGTATAAATGCTAAAGCAGTTGACATTAAAAGCGGAAAAGATGTTAATGAACTATGGGAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //