Array 1 1071130-1068189 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017015.1 Spiroplasma helicoides strain TABS-2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1071129 36 100.0 30 .................................... AAAATCTAAGTGTGAATTTGAACTAGAACT 1071063 36 100.0 30 .................................... CGGACCAGATAGAACAAAAAATTTATAATG 1070997 36 100.0 30 .................................... GTAAGAGTAAAAATAAAAAAAAATACTTTT 1070931 36 100.0 30 .................................... TACCACCATAGTTATTCACAATATCCTCTG 1070865 36 100.0 30 .................................... TACTTTGTAAATTACTTATTTTGTTGGTTA 1070799 36 100.0 30 .................................... CGAGATTGGTTTAATTGATAGTGGCTTATT 1070733 36 100.0 30 .................................... CATGTCATAAATTGAATTCACTGTACTGTC 1070667 36 100.0 30 .................................... ATAAAAAACAAAAGGCCTTGGGTGAGTTGT 1070601 36 100.0 30 .................................... TATCAAATTCAAATCCTAATGTGATTGTTA 1070535 36 100.0 30 .................................... AAGCACTAGGTTTTAGTCAATTAGGAATAG 1070469 36 100.0 30 .................................... TTAAAATTAGTTGGCTTCCAAACCTAGCTC 1070403 36 100.0 30 .................................... AGGTTTTAGAAGACTATTTCACTATACCAA 1070337 36 100.0 30 .................................... TTGTACTTAAATAAGTTCCACACTTGTGAT 1070271 36 100.0 30 .................................... TTTTGACAAACAATACATGGAAGACACTTA 1070205 36 100.0 30 .................................... AAGTAGATAAATATATTAATGAATGCCCAG 1070139 36 100.0 30 .................................... CAAAAGACCAAAAACTAGCAGAAACAGAGC 1070073 36 100.0 30 .................................... ATTAAACAAAATAGACCCTTTCTCTCAATG 1070007 36 100.0 30 .................................... AAGATTTAGACACGAAGATATCTCATGTAG 1069941 36 100.0 30 .................................... CCTATAATACATAAAACTGCACCTATACAT 1069875 36 100.0 30 .................................... GACTTTTATTAAAACATTGAATAGTGCCGA 1069809 36 97.2 30 .............................T...... ATATAGATAAGGTTTTAAAACTTATCACTA 1069743 36 100.0 30 .................................... TAATCTCATGAGATAAAAAAATAGAGTATA 1069677 36 100.0 30 .................................... AAAAAGATAGACCTTGATTAGAAGAGTTTA 1069611 36 100.0 30 .................................... TGTGGTTTTCCTGTATTTCAACATTGCCAC 1069545 36 100.0 30 .................................... AAAAATGTATAAAATAAGTTATAAAACTAG 1069479 36 100.0 30 .................................... TATATGCTTCATATCACTCAACTTGCTCAA 1069413 36 100.0 30 .................................... TAACATGTTTTGCTGATCCAAAATATAATG 1069347 36 100.0 30 .................................... CGTTATTAACCATTGCTTTAATGGTTGCTG 1069281 36 100.0 30 .................................... TGAAGCCACTCCAGAAGCAACAGAGGCAGC 1069215 36 100.0 30 .................................... AAAACCTAGAAACATTTCTTGGTCAATTGA 1069149 36 100.0 30 .................................... AGCAATATTCATGTTAATGTTTATTGCAAA 1069083 36 100.0 30 .................................... TGTAAACAAGTTTGTTGTAAGCAACATCCA 1069017 36 100.0 30 .................................... TTTGCACGATTTCTGTTTTATCGCCCATGT 1068951 36 100.0 30 .................................... AAAATCTAGATAATTATGTTGAACAAAATT 1068885 36 100.0 30 .................................... TTAATAATATACCAGTATTAATTATTATCT 1068819 36 100.0 30 .................................... TCTATCATTTTTTATTTCTCCTTTTTTTAT 1068753 36 100.0 30 .................................... AAGAATTTGAGAAATGAAATAGTATCAATT 1068687 36 100.0 30 .................................... CTTAATGATGAACATATTATAGAAAGTGTT 1068621 36 100.0 30 .................................... CAGCAACAAACTCGCATGTTGGTTCAATAT 1068555 36 100.0 30 .................................... AATTAATAACAAATGTAGCGATTAATGTAT 1068489 36 100.0 31 .................................... TAGAATTTAATAATCACATTAATGACTATAA 1068422 36 100.0 30 .................................... GTCATAAAAATATAATTTCAGTTCTAATTG 1068356 36 97.2 30 .....T.............................. ACTTTAATCAAAGTTTAATTTCTGATATTG 1068290 36 100.0 30 .................................... CTTTTAGTTTTAATGATGATGAAGCACTAG 1068224 36 97.2 0 ................................T... | ========== ====== ====== ====== ==================================== =============================== ================== 45 36 99.8 30 GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Left flank : ATTGCAGAACAAACTATATTGGTTATAGATGATGAAGTTGAAAATAAAAGCTTTCTTTTTAGTCAAAATAAATTAAGAATTATATATTTAGAGATCTTAAAAATTCTTATTAAAGTAAGTGATAAAAATTTGCACTTTTTATTTTTAAATCCTTTTTTAGGATTAAATTATGAGGAAATGTATCACCACTATAAAAATTTAGACTCGATAGATAATTATACAATTATAACTGAAAAATTTGTAAGTGAAGAAAAGATTGATTATTCATTAATGAAATTATATTTAGGTGATTCTATAATTGATTTATCTGAAATATATGATAACAAAACATTTTTTTCAAACTTTTCAGATTTAACTGATGATGAAGCATTTATAAATGAATTAAAACTAAAAGTAGATAATTTAATTGTAAACTATAACACTAAAAATTTAGATTTAAGCTATCCTGTTTTCCAATATTTATTAAATAAGTAAAATAACTAAATTTTACTTGATTTGAG # Right flank : TGATAAAATAACTTCATTATGTATTTTTAAATAGAATAAATATATAAAAACTTGATAAAGTTCTATGTTTTGTATAAATATTAGCTATATCTTCATTATCTGAAACTTTATACTAAAAGAATAGGGGATAAACAAATAAAAGTACTTAAAAGTTATTTTAAAAATAAATAAATTTGATAACCATATAAACCATTAATTATTAAAGTTAAATAAATACAACAAATCTATATATTTTTTAACAATTAAATTATTATGACTTAAATCAAATAAAATTTTTCTTTAAAAATATCATTGCAAATGATACAAAAAATAAGTATTTTAATTATCTAACTTGTCTTATTCTATAAATTAAGTTTTAATAGAAATAAATCTTATAGGTGATTAAAACTTTTAACAACAAGTAATTTGTATTAACTATTGTAAAAAATATTCAAAACTATAAAAAAATTAAGTAATTTAATAGTAATTAATAGTAAAATCAAATAAATAAAGGTGGATAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //