Array 1 406161-405003 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADNFW010000001.1 Streptococcus oralis strain J1101437_171009_E6 NODE_1_length_873471_cov_101.781, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    406160	    36	 100.0	    31	....................................	AGATCAGGCAAATACGATGACAACCCAACAG	
    406093	    36	 100.0	    30	....................................	AGCAATCGAAAAGAAAGGACTTTTTATGAT 	
    406027	    36	 100.0	    30	....................................	AAATGAATAACGAAAAGATTATCGAAAAGA 	
    405961	    36	 100.0	    30	....................................	TTCGGCGAGCATGTTTATACTAGTGAATAT 	
    405895	    36	 100.0	    30	....................................	TATCTTCCTAATTCAATGGTCATTGTAGGT 	
    405829	    36	 100.0	    30	....................................	TGCTTCTAGATTACTCTTTGTAGAGCAAGG 	
    405763	    36	 100.0	    30	....................................	CATCACTGTTCACAATGGGCAACAGAGATT 	
    405697	    36	 100.0	    29	....................................	CAATTACTAGAAAGTCTAGAACCAGATGA  	
    405632	    36	 100.0	    30	....................................	CGATGAAATGATGCCTGCAATTCAGGTAGT 	
    405566	    36	 100.0	    30	....................................	CACCAATACGAAACCCTAGATTAACACCAG 	
    405500	    36	 100.0	    30	....................................	GTATCACTCCTTCATATAGTATATGTTACG 	
    405434	    36	 100.0	    30	....................................	TTACTGATGTTTCCGCTCTTTGTAATGCCA 	
    405368	    36	 100.0	    30	....................................	ATAAATACGGGGACAGCTTTATCAAAAGTG 	
    405302	    36	 100.0	    30	....................................	CTTCACTTATGGTTTTGCCTAGTGAAAAGA 	
    405236	    36	 100.0	    30	....................................	TAATGAACGAATAAAGTCAAGCATTTTTCT 	
    405170	    36	 100.0	    30	....................................	GAAATGGACTGAAGAACTCCAGGACAATGA 	
    405104	    36	 100.0	    30	....................................	CGTTCCAAGTCATCCCACTTCCAGGGTTCG 	
    405038	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        18	    36	 100.0	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                               	       

# Left flank :   GATGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTTACTAATCATAATAATTCATTATATATTGTTTTGTTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTGTCAATCAATATCCAATAAATCAAATACCTGATGAACAAGACTTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGTTCGGACATTCTTCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAAAATTTTGAATAATTTGTATCAGTATGAAATGAAAACAAAATTTCGTAGTGAATCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGGAATTTAAGAATTTATAATATTTTTGAGGGGAGCAAAAATCAAAATTGACGAATTTGAG
# Right flank :  ACCTCATGCTTGAAGATGGCCGATTGGCTGAAAAAGAAAGTTTCAACATCGAGCCTGACGGATTGATCACTACAAAATAATTTTTTAAAAATAGAAAGGAAATTTTCTAAAATATTGTTCGAATTGTAACCGCAGGCTCAGGCTTGCGGGCTTTTTTGTTTGCAATAATAAAAGCAGTGACGGAAATCACTGCTTATCAGCTGTAGCAAATTCATAAAGTTTTTCTGCTGTGAGAAGTGCCATTTTGTCCATGCTTGTTTTTCCTTTTCTGAGGTCAGAAACGGTAGTCCATGGCACACCGGCACCTTGTGAAATAGCAGATGTAGAAATAGAACTATTAAGTAATTCTTGAATAACTTTTCTCATATTTTTCTTTACCTCAATTTTTATCTTAATCATATTATATAACGGAGAACCGAGATGTCAAGCGTTTTGATAAATTATTTCTAAATATTTTCGCCCAAAACTTGCCCCCAAAAACTTATTTTTTTATATTTTTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//