Array 1 24643-25413 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWXF01000025.1 Desulfacinum hydrothermale DSM 13146, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 24643 37 97.3 35 ...................G................. ATGCAAGCCCAAAGGGCCGCTCTGAGGGAGCAGAA 24715 37 100.0 38 ..................................... TTGGCGCGGCGTCCGCTGCCTGGGGTCAGGGCAATATA 24790 37 100.0 36 ..................................... CAGCTCCCATGATGTGAGAAACACCCTGCTGCTCTT 24863 37 100.0 36 ..................................... GCCCAAGAGCATCGAGGAACTCAAGCGATATGGCAT 24936 37 100.0 38 ..................................... TCCCCTTGGCATTGTGGGCAAGCGTCCAGCGTCTTATC 25011 37 100.0 36 ..................................... CCTCAAGGCAGGGAGCATGCTTGCCATAACATCTGG 25084 37 100.0 38 ..................................... CTGGCCCTTGGCGCAATGGCTACGTGGCTCTATAAAGA 25159 37 100.0 35 ..................................... TTGACGGCTATTCCAATATCGAATAAGACACTATT 25231 37 100.0 35 ..................................... CTATGAAAGCCAGAATTGTTATCACCACTCAATTT 25303 37 100.0 37 ..................................... TGGGCATCCAGGACCTGGTCAACCGTGGCCTCGTCTA 25377 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 11 37 99.8 36 GCTTCAATGAGGCCGAGGCAGGAAAGCCTCGGAAATC # Left flank : AAATTTCGCCTATGCATAAAACTATCTTACAACAGATATCTCAATGAATTTACATCTCATTTATGCTATAGGGTCTCCCGTCACATTTTCACCCGGCAGGTGCACTCATAAAGAAAATTGAGATCGAACAATCTTCGAAGGCCTTCTGCGGCGGACACGCTGGCCTGGCCCTTGTGGGCAATCTGATCAACGCCACCACGAACCTGTGGGGGCAGTTGGAAAAGGAAGTTCCAGTGCGGCCGATGATCTCGCACGCGGATGTGCTCAAGGCCTGCTTGGGGCTTCTGTGTCTGGGCAAGAGTGACTTTGAAGCCGCTGCGGAGTTTGCCGGCGATGACCTGAAAAAGTGGCTGAATCAGGGCGTCGGTGACCCCCAATATGGGTTCCTATTCCATGCTGCTCGATCCACTCAATCACACTTCACTGATTCAGGAAGAGGTAAGCATCTCAACTGCATTGGCACAGAGGGTAGCGAACCGGTGTGAGTGATTCCAGTTTAT # Right flank : CACCACCTCCACCGGCCCTGTGGCTGCAAGACATTGCGGGGGCCGGTTCGAGTGGTTCTTGTTTGGTTCCCCAATCCATTGCCAGGATCCATGTCCATGGTCAAGCCTCACCCGTTAAATCTTTTGTTTTCAAAGAGCTATGAACTTCGAGCGCTCCCCGGGCTTTCGTCGGCACCGGAGCGCTCGCCCGTCTCCGGCAGCCTCTTCACACAATCACCGGCCGCCTTTCCACCACACGATATTCCTTGCCAAGGCTCTGGACCTTCATCTGAACCCCCTCGGCGGGTCCCAAGTCCATGATGAGAACATGATCTTCGTCCTGGTTCACAATGGTTCGAAGGGTCTCCTCCATGCGAAGCCGCCTGATGCGGTCCAGACGGCATTGAAACACGGAAAGCTGCAGCCATTCTCCGTAGCCCTTCATGGCCTTGTACAGACGGCGCCATCGCTTGTCATCTCGAATGTCGTAGCAGACCAGGTACAAATGCTCCATAACCACT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGAGGCAGGAAAGCCTCGGAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 2445-2775 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWXF01000033.1 Desulfacinum hydrothermale DSM 13146, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2445 36 100.0 38 .................................... CCGTATACCTTACTTATGCCCCACACACAAATGAGGCG 2519 36 100.0 38 .................................... ATACAATGCGGCCAAGATAGTATTGGCCACGCACTATG 2593 36 100.0 36 .................................... CGCGAGATCGAGATCACGATCGCGGGCAAATCCCGA 2665 36 86.1 39 ..............T....C..........TA...G GCACCTGACCTCCGTGAAACTCGTCGAGTAGTGGGAGTA 2740 36 80.6 0 ...C.........TG....G.T........T....G | ========== ====== ====== ====== ==================================== ======================================= ================== 5 36 93.3 38 TTGAAAGCTCCTTCCTTGCTGGAAGGAGATCGAAAC # Left flank : AAAGACGTTGGGAGTGCGAATACATCGTTGTCCTTCCTGCGGCTACACGGCTGACCGCGACGTGAATGCCGCCCGTAACATTTTGGACCTTGCGGTCAAGTCGGCCCGGACGGGGCCGCCAGGCGTGAACGTGGCCGGTTGCGGCGTGCGTAGCCTGGGAAGCTCCCTGCTTTAGCGGGGAGAGTCGTCACATATGGAACCGATACCAGAAGGATATGCCGTGGCGTGGTCTCCCCTGCGTCCGCCCTATTGGGAGCGCCGATGCGCCGGGCGTTGCCTTATTCCTGTTGAAACGTCCCTGCCGGAATCGTGCGAGGGCTGAGGTGGTGACGGAAATCCCTGGAGCGCTCGCAGGTGGGAATACATAGTTGTAGCGTTGGGTTGCTGTAGGGCAAAGGGGATCTGGGCATGCGGGGAAAGACAAATTGGGTAACCAGAAGCAGGACCTCTCGCAAAGCGGTCTGGCAGCCCGCATCAATCCACGGCCAAGAAAGGAATTA # Right flank : GAGGCTGGCTGAAAGGTATTTCCGATCGCCAGGCAACGTTGAAAACTCCCTTTGCTGGAGATTGAAAATAGAACGTGCGGGTTTGGGGGCGGCTACAGAAGAAGGTCGAAATCTCCTATTCTAAAAAAAAAGGAGATGTAAAGGTGCGCGCCTACGCAAATCTTGCCAACGAAAGGACCTAGTTGAAAGCTCCTCATTTAACAAGAGGAGATAAAAAGGGCATCTACCGCGGCGGATCTGTCCAGAAGGCGGTATTTGAAAGCTCCTTCCTTGCCGGCCTTGCCGGCCTTGCCGGAAGGAGATCGAAACCGGGTCTCGATCAGGTCGTTCAAGGAGTTGCTGAAGGTGATTGCAAACTCCTGTTGTTCCGAAAGGAGATTGAAACTGCGAAGAGTGTGTCAGCTGCCACCCCCTAAATCCGGGGGCCCTCCTTCGCTAGATTTTCCATGGTGTTCAGGTAAGCGTTTCCTTTTTTGCCGGAAAACCCTTCTCCTCCAGGA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAAAGCTCCTTCCTTGCTGGAAGGAGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.20,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //