Array 1 64524-66767 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBJV01000013.1 Clostridium tertium isolate Clostridium tertium, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 64524 30 100.0 35 .............................. TGATTTACTATATTAACAATCATGTTTTCTCTATC 64589 30 100.0 34 .............................. TAAATTCATCTATATTAATTTTTTCCACTACAAC 64653 30 100.0 36 .............................. ATTGTACAATATACAATTAGCATCTATTTATTATTT 64719 30 96.7 36 ..............A............... CTAGTAATAACTCTACCATCACCACAATCAATCATT 64785 30 100.0 37 .............................. ACAAATTGTAACTGATACTCTTGCATCTATTGCTGCT 64852 30 100.0 35 .............................. TTTCATTAAATCTAAACATAATCATTCTCCTTTTA 64917 30 100.0 35 .............................. AAGGTAATTAACTTAACCCCTTTGGAGATAGTAGG 64982 30 100.0 35 .............................. AATAAAATAGAAGTACGAAAATCACTATTAATCTC 65047 30 100.0 34 .............................. TAATATTTAGCTTCATCTTTAGAATCAAATGTAA 65111 30 100.0 36 .............................. TTGTGATATACCGTGAAATCTGGTGTATATGTAAAT 65177 30 100.0 36 .............................. GATCTACCTAAAGCTAAAGACATTTCCTCTACCCCA 65243 30 100.0 35 .............................. ATAAATTTCATTCTGTCTATAGTTCCTATGATTTC 65308 30 100.0 34 .............................. CCAAGTATAAGCTATTTAGTCACCAAACACTTTC 65372 30 100.0 35 .............................. ATCATCATTTTTCAAAAACCACATTCTTAAAAAAC 65437 30 100.0 37 .............................. AACTTCTCCTTGTAATCTTCTCTTATTTCGTCTAATC 65504 30 100.0 36 .............................. TTTCTATCTCTTTTTTTATTTGTTTAAGAATTTATA 65570 30 100.0 35 .............................. CAGAATTTATAAGTCCATCAACCGAAAAGTTTATA 65635 30 100.0 35 .............................. TCAAACAACTAACAAGAAAAAGAACTCCAACCAAA 65700 30 100.0 37 .............................. TAAGTCAAAACATTATTATATTCATCAGTTCCTTTAG 65767 30 100.0 35 .............................. CTTAGATAGCTAACTTTAACGCCTTCTAGGACTTG 65832 30 100.0 34 .............................. AATATTAAATATAATAGATAACAAATATTATTAT 65896 30 100.0 35 .............................. GAGATTAAAGACCAATCTATAATAAAGAAAGATAA 65961 30 100.0 34 .............................. TATATAAGTTGTTTTATATAAGCTGATGTTCCTA 66025 30 100.0 35 .............................. TCTATTGTATTCTCTAATCCAAACCCATCTAAAAC 66090 30 100.0 36 .............................. AATCCCAACTACTACAATTAGTTTTCTTTACAGTTC 66156 30 100.0 34 .............................. TTAGGAATCCAGTTATTAACTGGATATCCTTCTC 66220 30 100.0 34 .............................. TTAGGAATCCAGTTATTAACTGGATATCCTTCTC 66284 30 100.0 37 .............................. CTAGGAAGATTTGTTGTGGTACTTCTTTGAGTAAGAC 66351 30 100.0 36 .............................. AAAGAAGAAATTATTGAATTTGCTAATGAATTACTA 66417 30 100.0 35 .............................. ACCAATATATTTAATAAGTCCTGCTCTTCTTTTAA 66482 30 100.0 35 .............................. GATTTTAGATAATAGAAAGATTTTTTTGGATTATT 66547 30 100.0 36 .............................. TTATCGGGATAACAACTGGATATAGGTCGCAAGATT 66613 30 100.0 36 .............................. TTATCGGGATAACAACTGGATATAGGTCGCAAGATT 66679 30 90.0 28 ................G......G....C. CCTGTTATTTATATGCCTTTCACATCCC 66737 30 76.7 0 C....GG.....G..T...........T.G | A [66739] ========== ====== ====== ====== ============================== ===================================== ================== 35 30 99.0 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TAAGGGTGGAAATATTATAATAGGGACACATGGAAATATTATTATTATTATAATGAATTACTATGACAAAAAATATAATTATGATTTTTAGAAAAATTTAAGTATGCCAGATATTTATAAATTGACTTTTCAATATGAAAAGCTCTCGAGTGTTGATCATATTTGGCATTAAATTATAAAATACAATAGAAGTACTTGCTTGATTAACGATGATAAAATATAAATTTAATTTTTCTAATAAATAGATTTATCTTAATATTATAAAGGGGGTCGCGTCACGCGACGTCCTTTATTTTATGGGAATTATAAAAAATATATTAAAAATTTTTACCAAGCTATTATTTTATAAAGTATTTAGAAAATAAGTTATATTGCCAGTTTAGGCTATAAATTATATAAAGCTTTTTTTATTTAAGTAAAGCTGGTAAAAAGTTTTAAAAGTGAGATGTTTACAAAGGTTTCATAGGCATGTATAATTTAAGAAAGGCTTAAAATCAATG # Right flank : GATAGTCTTAACGGCAGCTATAATCATCATTATTAATATTTAAAACATAAGATTCGAATATGAAATATAATTAATAATTTAAAATGTTAGAATTTGAATAATAGATATATAAAGCATCTGTAATTGATAATTATGGGTGCTTTTAATTATTTTTATTACATTTGTATATTATTTAAAATATATGACGAAGCTATTAATAATGAAGAAGAAGGAGAAGAGTTATGAAAGTGAAAAAGAGATATAAAGAAAAAGATAAAATAAATATAGAATTAACTGTAGTTAACATAATAAATAATTATAATAAAGTCAAAATGAAAAGTGAAATGAAATAAAATAACTAAAAGATAAATTATAATTTAGTTAATAGTAACATTTTATGTTTTTAAATTATATTTTAAAAAATATTAATTATTAACCTTAACATAGTTCTACATAATTGTTAATATTTACAATTATGTAGAATGGATGTACAATTATTTTAGGAGGTGATGACATGAAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 75992-76415 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBJV01000013.1 Clostridium tertium isolate Clostridium tertium, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 75992 30 100.0 35 .............................. TTAATTTTTCTTTTAATTAATCATTTTGTAATTTG 76057 30 100.0 35 .............................. TATGCTCGGGAATGGGCTTTCTTCCCATTGTTATC 76122 30 100.0 36 .............................. AATATTATTAAGGTTTGTCCTTCTTTTCCTTTAACA 76188 30 100.0 35 .............................. ATAAAAAAATTACCCATCTACTCAGCTCCTATAAG 76253 30 100.0 37 .............................. ATATACTTTTCAACCGTACATGTTGGGCGATTGGAGC 76320 30 100.0 36 .............................. AAAACATTATTATCATAGCTTGATACTTTTATTTCG 76386 30 96.7 0 ...........................T.. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 99.5 36 GATTAACATTAACATCAGATGTATTTAAAT # Left flank : AATTTATCCCCTTTAGTTTAAAGGATGGTATGTAGCATGGGTAAAAATATCAACTATAACTATGCTTTTTTATTTTATGATATAAAAGAAGAGAGAGTTCAAAAAGTTTTTAAAGTATGTAAAAAGTATCTGTCACATTTTCAAAAATCAGTGTTTAGAGGAGAAATAACACCATCAAAACTTATATTATTAAAGAAAGATTTGAATAAGGTTATCGATAAAACAGAAGATTTCATTTGCATAGTAAAACTTATTAATGGAGACGTATTTGGTGAAGAAATACTAGGAGTTCAAAGTAATAATACTGGTGAAGATTTAATAATATAATTTACCAGGCGGTATTTCTATTAAAATCTTTATAAGCGTTAAAAATACAGGCTTTCATAGGTTTTAAAAATAAGTTTGTATTTTTTATATTAACTTGGTAAATTATTGAGAGAAGTAAGAGGAAATAAGGTTTTTAACAAATTTTATTAAATAGAAAAGTCACATTTTCTAAG # Right flank : TTTATAGTTACTATCTAGTATATAACAGTAACTACAAGTACATTATAATAATATATTTAAATTTGTAAATATAAAGAATCAAGAACCCAGTATTTAGGTAGCCCCCTAAAATCACAATATATATTACATTATTTTTTAGATGATATTTAAAAAAAATTTGATAAGTAAAATAATTAAAATCTAAATAATAAAAAAGTGATGGGATGTTGTTATATAGAGTTATTAAAAAGTACATTTAATAAAGATTTTATTAAGGATTTTCAAATTAATTGTTTTAGAGACGAGTTTTTCATAATTTATAAAAAAATAATTAAATATTTATTGTAATCGAACCCAATAGATTGACAAGAATGCTAAATAGTTTTATAATTAGTTAGAAGTCTAACAAAAGCGTGGGTGTAATTAATGAGTGAAATAAAACACATTGGAAGAAAAATTAATATACTGTCTCATAAAATTAAGAGAAGAATAGGTAAAGTATCATTAGAATATGGGATAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATCAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //