Array 1 4719-6161 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000002.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 4719 30 100.0 35 .............................. CATAGCAATATGGTCACAGTAGCAGATGAAGTTCA 4784 30 100.0 36 .............................. TTGGAGGCACCAAATCAAACTATGTGCGCCCAAGGA 4850 30 100.0 36 .............................. TCTTTGCTGACAACGGTACATGTCCAGCATCCGAAA 4916 30 100.0 41 .............................. GAAGTCTTTCCTGTCTGGTACTCAACAAGGCTTTTCAGTTG 4987 30 100.0 39 .............................. TCTTGTTCCGATCCCCGCTTAATGGTGGTGTAGTCGTCA 5056 30 100.0 38 .............................. TACCACTCGGCGTTTCGAATCATGGGGTACCTCCTGTT 5124 30 100.0 40 .............................. AACAAAGAATGGATGATTTCTTTTCGTTCATAACGGTCAG 5194 30 100.0 35 .............................. CGGTTGAGCGTGAAGTCAAACAGATCGAGATAGAC 5259 30 100.0 35 .............................. TGGAAAGCAGTCCACCAAAGAATTGACGGTAAAAG 5324 30 100.0 36 .............................. TGGATTAAACATCTACGACCACGGTGCTGATGATCC 5390 30 100.0 39 .............................. CCGTTGATTGGGGAACCTACCGGGAATCATTGTCCCTCG 5459 30 100.0 37 .............................. TCAACTTCCAAACGAACAAAAACACGCATAATGGGGA 5526 30 100.0 40 .............................. TCCCACGGATCGATAATAGCTGGAGATTCCGTTTTTTTGT 5596 30 100.0 39 .............................. TTTTCACTTGTACTTTGTATTTGGATGGTTGTGGTTCCC 5665 30 100.0 37 .............................. TCACGCGGCTGAGGGGGAACGCGGCTTCCCACAACGA 5732 30 100.0 39 .............................. GAGTATCAAAAACGTCCGTTTTAGAGACTAATTATCGGG 5801 30 100.0 35 .............................. TCTTTTGGCTTTTCTGTTGGTGTTTCAATTTTGGT 5866 30 100.0 36 .............................. TCCCAGATCCAGACGCGCTGGGGAAGACGGATTCGC 5932 30 100.0 36 .............................. TAAACCAGAAGATTTGGCTGAACAGTTGTCCAAGTG 5998 30 100.0 37 .............................. TCCCGGCTTGCATGTCGTCTGTATCAAGATCAACCTC 6065 30 90.0 37 .........................A..CA GTACAATCACAGCGATAATGTGATGGTGATGGCACGC 6132 30 90.0 0 ............TT........T....... | ========== ====== ====== ====== ============================== ========================================= ================== 22 30 99.1 37 GTTTTAGATCTACCTATGAGGAATTGAAAC # Left flank : AAATCCTCTGCCTTCGATGTCATTTGCCACTCGGTCAAAATGGAACGCTTCATCCTATTCCTCCTCATGCCATTATTACAAAGTGATGTTGCGGTCAGCATGCTTGCCAGCAACATACTAAAAAATGTGAACGTTCATTAAAAATGATAGCACATAAAATGGTATATTTTTATTTTTATTTCTTTTTTTCGCTTTTTTGTTATAAAGAACCGGTCGTGGGACCATCCAAATGATATATTCACACAGACTTGAACGGTCAAGATGATTGGAAGTAAAATGGGTCCTATACAGCGTATTACAAACGGAATTCACCTTTATTTCGTATCACGAAACAAGTCGTCGACCCCCAATCGTGTAAAAACCCCTGGGGGTCGACGACAATTTCTAAAGAACGAAATCACCTAGTATAAAGGGAAAAACTCGTACCCGGTTGTTTCGACAACATTTTTTCTGTATGATGGAAGGGTCAGGGAAATCCCTTTGTTTTGCGGTTGAAATGG # Right flank : CCCTTTCACACCTTTTTCTACTTTCACAGCATTCTCTGTTTTAGATCTACCTATAACAGCAAAAATCCGGGTAGGGGGCTTTCCCTACCCGGATTTTTGCTATCGGTTTAAATGTCCTGTCCAACTCCCTTATCAACCCATTTTTCATCCTTTACACACAAAAAAACGGTTCCGAGTAAGTCAGAACCGTTTGAGATTGCTAACCTTTGTCAGCAATCTCAGCAGAGTCGTAGGTTGTTCCTATGTCTCGTACAGCGTTCCCTGCTCTGCAACCTGTAGCATCGCATCCTGGGAGCAATCATAGGAAAGCCCATGCTGTTCCGCTAGGGTCTGTTTCAAAAATTCCAAGGCACTTTCTTCTGCGTGGTCGTTGGTACCCAGTTCACCACGGAAAGCGCGTGAGAGCATGGATTGGGTAAAAATATGATTATCAAATTCTAGATCACTTTGTACTTTTTCTTCAGTTTCAATTAATAGCTGAACCTTTTCCAAAATCATCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 13031-15820 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000002.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 13031 30 100.0 39 .............................. TCGCCATAGTTCGTACTAAAATACCCATTTTGGTCTTGT 13100 30 100.0 39 .............................. TTGCTAAAAGACAAGGAAAATATAAGGGACGGCCACCGA 13169 30 100.0 36 .............................. TGATACCAATGAATCCATCTCCTGTACTTTGCTCCC 13235 30 100.0 39 .............................. TACGTAAAGCCCATTCATATTCTCGATTATCAATTTCTG 13304 30 100.0 35 .............................. CAGGCTCACGATCATATTCCCTGTACAGCCACCGC 13369 30 100.0 38 .............................. GGTATTAAGGGTTTTTCGTATGTGCTGGAGCTTTTGGG 13437 30 100.0 40 .............................. TTTTTGAAGAAGGAACAGAAACAGACTGGATGTTGGATCC 13507 30 100.0 37 .............................. CCATTGGCAATGTGTTGTTTGTATCTGGGATAGACCT 13574 30 100.0 37 .............................. TCAACTTCCAAACGAACAAAAACAAACAGATGGGCGA 13641 30 100.0 35 .............................. AAGAATACCTTCACAGAGAAGGACAAAAACGACGA 13706 30 100.0 35 .............................. CTAGTTAACTGTCAACACCTAAATTCCTATTTAGT 13771 30 100.0 39 .............................. TCTGGTCACGTATTCCAAAAGTAATGGATTCTCAAAAAA 13840 30 100.0 37 .............................. TATCCTTACAGCAAAGATCCGGTACAATATGAAGCGG 13907 30 100.0 35 .............................. AAGCTATAGCTATCCCGATCCAGATAACCATATCT 13972 30 100.0 38 .............................. CCTTAAACCGGTTATCTCCCACTTTTTTAAGATGGCCG 14040 30 100.0 39 .............................. ATGGACATGGCCCACGCAACGGAAGAAACGGACGTCAAC 14109 30 100.0 37 .............................. CTCATAATATTTGCTTCCTTTGCAATGAGGAGAAAAT 14176 30 100.0 36 .............................. AATCAATGACGAAGCCCTTCCAGTTGTCATTCTGGA 14242 30 100.0 35 .............................. TATCGTTCGAGTGCTGCTTGTTTGTGATCCTCCGG 14307 30 100.0 39 .............................. CATCATTCTGAAACTTCAAGAGGGGAATGTTCATCTCAG 14376 30 100.0 40 .............................. TAGGACGATCAGCGCTGGTTGTGGTCAACATAGTGATCTT 14446 30 100.0 37 .............................. TAATCGTCGTATCTCTCATTCCGGTATGCCTTCCAAT 14513 30 100.0 39 .............................. TCTGAACATATACAAAAGAAAGCAGTGCTCTTAATTTGA 14582 30 100.0 35 .............................. GGTTGTCATTACAAATGTTTTCTGTGTCCGTCCCG 14647 30 100.0 35 .............................. AAGCTGTTGACTACACTTGGAGGTCAAGCGACAGT 14712 30 100.0 37 .............................. CTAAGTAATTCATGATAATTTGTTAAGGAGCGCCCAA 14779 30 100.0 40 .............................. ATAGGACATAAGCCGGAAACTGTTTCCCGGATGATGTCTT 14849 30 100.0 38 .............................. TTGCGAAAATCTGGTCCAATCGTTTACTGGCTCATTTG 14917 30 100.0 39 .............................. TTGACATCCCGGATTCAGACATCGAAGCAGAAATTACGA 14986 30 100.0 35 .............................. TCACGATGGCGACCGAGTAGATTTGCCTATGGCGC 15051 30 100.0 37 .............................. CCATATGATCTCACAGCTACGGACTGGTACGGTATTC 15118 30 100.0 35 .............................. AAGCTGTTGACTACACTTGGAGGTCAAGCGACAGT 15183 30 100.0 37 .............................. CTAAGTAATTCATGATAATTTGTTAAGGAGCGCCCAA 15250 30 100.0 40 .............................. ATAGGACATAAGCCGGAAACTGTTTCCCGGATGATGTCTT 15320 30 100.0 38 .............................. TTGCGAAAATCTGGTCCAATCGTTTACTGGCTCATTTG 15388 30 100.0 39 .............................. TTGACATCCCGGATTCAGACATCGAAGCAGAAATTACGA 15457 30 100.0 35 .............................. TCACGATGGCGACCGAGTAGATTTGCCTATGGCGC 15522 30 100.0 37 .............................. CCATATGATCTCACAGCTACGGACTGGTACGGTATTC 15589 30 100.0 35 .............................. ATTGCTTTTCCGGCTGTATCTTTCGATACTCCGGC 15654 30 100.0 37 .............................. ACTCGTTGTTTTCGACCCTTTGCATCGCTTCCTCCGG 15721 30 100.0 40 .............................. GACAACAAGTATGTACGTTTCTGAAGTCGATCTTCAACTT 15791 30 83.3 0 ...C....C...............G...GA | ========== ====== ====== ====== ============================== ======================================== ================== 42 30 99.6 37 GTTTTAGATCTACCTATGAGGAATTGAAAC # Left flank : AACGCAATTTAAACAATGTGGTATTGGGATCGGGATGCAGATTCCGCTCTGCTGCCTCCCCCAGCTTGGTCAAAAGAGGCCATTGCTGAAGAAATTGAAAATTGCTCTCTCCCATGGCTTTCACCTCTTGTTGAATAGTTTACAAATTCATTATAGCAGAGCAAATGATAGATTTTTATTCGTTTTTTCGTATTTAAGATATCGGAAATATAATCTCCGATTGGCAACCTGGTTGTAGGATATGGATATAATGCAGTAAACTAAAACCGTATAACAATTGAATATGGACAGCGTATAATAAACGGAGTTTATTTTTATTTCGTATAACGAAACAAGTCGTCGACCTCCAATCATGTAAAAACCCCTGGGGGTCGACGACAATTTCCAAAGAACGAAATCACTTGGTATAAAGGGAAAAAACCGTACCCGGTTGTTTCGACAACATTTTTTCTGTATGATGGAAGTGTCAGGGAAATCCCTTTGTTTTGCGGTTGAAATGG # Right flank : AAGCTCTAACTCTTTCACACTAGATTTTGGGATTGCTTCATCGCTTTTATATCTACCAAAACAAAAATCCGGGTAGGGGTCTTCCCCCGCACCCGGATTTGCTGTCGTTTAAAGCGTATTTCACGGAAATAAATTTACCTTCTCTAACCTAATTCGAATTTTCTTTGTCCCATTCAATAAAGTATCCCCTTCCTATCGCGTGCAGAACATCGCAAACCATTCAGCAAAAATCTCAATATCCTTGGAGAGCTGCACCAGGAGACAAATCCTGATCGTTGATGGGTGTGTCCGCAAATGTCTTTCAAAAAACACAACCAGGACTTCGGCAATGTGAGTGGCGACTCCAACCAACTTCGACGCAATTGAGGACAGGTGGATGATCCCGATACGTTCGATATGCTGGATCTCGAAGACATGACCGATAAACAGGAAATCGCTCTAATGCGGGAACTGATAAATCGGATGCTAAAAGAAGAGAATGAAGGGAATTCCATAAGTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 471470-472089 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000002.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 471470 30 100.0 36 .............................. TATCTGTAGGTATCCCCAGATCGTTTGTGTGCTCTG 471536 30 100.0 38 .............................. AGGCAGCGCGGCAACTCAACAACAGTAGGTGATACGGA 471604 30 100.0 37 .............................. TCCAGACCAATATTGATATAGCCCATGGAAGTTGGCC 471671 30 100.0 40 .............................. ATTTCAGTGTCTAATACTTTCAGACGAGCCGTAAGCGCTT 471741 30 100.0 36 .............................. CTGACAAGTCAACTATAGACTCTTGGATCTTGTTCA 471807 30 100.0 34 .............................. ATGAACATCTATGTGAAAGAAGGAGTCGGCCCCG 471871 30 100.0 25 .............................. TCTGTTCCATGCATCTATTTCCACC Deletion [471926] 471926 30 90.0 38 .................G...GT....... TAAGTTCACTGGAAAAGACCACAAGATGCGGGAAGAGA 471994 29 76.7 37 .........-C..T..A.G......A...T CTCTCCCTAGTTATCGCCCGCAGTGGGGCGTAGCGGT 472060 30 73.3 0 .........A....C..G..A..A.A.G.T | ========== ====== ====== ====== ============================== ======================================== ================== 10 30 94.0 36 GTTTGTATCGTACCTATAAGGAATTGAAAC # Left flank : GGGCAAGGATTGGTTCAAATGGGAGACCGGAAAGATCAATGGGATTTTCAAGCCAACGTTTATGATGATTATGCCATCCTGATCCCTGCCGGTAAATGGCACAATTTAACCAATACCGGAGATCAACCACTGAAGCTTTACTCCATCTATGCGCCACCTGAACATCCTTTCGGTACGGTTCACAAGACGAAAGCAGACGCCATGAAAAAATGATTGAGTTCCAATATGGATCTTTTAAGGATTGGCGTTAAGCCGTCGTTAAAGTTTTGGTTGTGTTACCATTTAGGCAGTGGATGAAAGCTGTAATGGGAAAGACACCCATTATTTTTAACATTGTCGTCGACCCCCGGTAATGTAAAAACCCCTGGGGATCGACGACATATGCTTTATGGCCGTTTTTAGCGACACAATGCGGTTTAACCATACGCAACCGATGATTCACCAGAACAGTCGATGTGAAGTCCCTACTTGAAAAGTCAATCATCGTGGGGGTAAAATGG # Right flank : TACCTTCCTCTCATTGCCACCATTTTTAAACCGGGCGGGATCTGATCCCGCCCGGTTTTTGCCATATACCTCCGTTGTTAAGCCGCATCGATAAACGAAACCAACCCTTTTTCCTTTCCTCTTTTGGATACGATCCGGCAAACCCCTGACCTACTTCGCCTTCTCCCGATAAAACTCATGAAACAATTTAATCAGCGCACGCTTTTCAATCCGGGAAACATAAGAACGGGAAATTCCCAACTCCCGCGCAATCTCCCGTTGCGTCCGCTCCTCCCCGCCGGATAAACCAAACCGCTTACGAATCACTTCCTGTTCCCTTTGATCCAGAATGTGAAGATGTCCATATATTTTTTTCTTTTCAATCATTAACTGAACCGTTTCCACAATCTCATCCCGGTCTGTTCCCAATACATCGATTAAGGTGATCTCATTAACACCATTCATTTATCTGTATATTGATTTTGGACAAACATTAAATTACCTGAATTGTTACCGAAAAA # Questionable array : NO Score: 8.92 # Score Detail : 1:0, 2:3, 3:3, 4:0.70, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 52600-53238 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000001.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 52600 30 100.0 39 .............................. TATAGTCATTGGGGAAGGTCAGTCCAATCCAGGACCCTG 52669 30 100.0 36 .............................. ACGTGTGCGCACATTTGCACATATTGGGAGGGATGC 52735 30 100.0 38 .............................. GACTTGACGAAACTTTGAAAAGCTTCTTCTCAAACTTG 52803 30 100.0 40 .............................. CTCATTCCCCACTCACCTTCGCCAGCTATATACACCACCG 52873 30 100.0 37 .............................. TCCTGATTCGACAATCTGAATACGACCCGGATAAAGG 52940 30 96.7 38 ..........C................... CCAAGTTTCTGTGCATCATCAGACACCATATCCATTGC 53008 30 100.0 38 .............................. AGAAACAACTTCGAAAAAACGGTTTCCGTCCTGATCCA 53076 30 100.0 37 .............................. TGTACTTTTCTAGCATATCAATCAAGCGCTCACTTCC 53143 30 100.0 36 .............................. CACGCCCTGCCGTGGTGTCCGACAGGGTTGCGCGAA 53209 30 93.3 0 .........................C..G. | ========== ====== ====== ====== ============================== ======================================== ================== 10 30 99.0 38 GTTTGTATCCTACCTATGAGGAATTGAAAC # Left flank : ACCTGGACCAATGCGGAAGGGGACCTGATTACGTTGGACGAAAAACGGGTGAAGGTCGACTATATTCAACAATACACCGTCTCCCATATGAAATATGAAAAATGGAGAGATAAAAAGCTGGTTCAGACAGAATTGGAGTATTTTCCACTGCGCTGGTATGGGGTGGAGGAGTTCCGCTCCATACTGGAACAGATCGGATTCTCCGATATTGTGATCTCTGCCGATTACCAATATGGAGAATATCCCACCAAAGGGGATCAAACCATCACCTTTGAAGCGCACCGCCCCAAAGCGTAACGGATCGTATAAAATCCATTGAAAGTGGTAGATGAAATGTCGTCGACCCCTAATGATGTAAAAATCCCCAGGGGTCGACGACATTTGTCATGTGGCTCATTTTACCGGTACAATCACGGTTTTACCCGATCGGGCGCATGATGGTCAGAAAAACCGATGTGGACCCCGGACTTGAAAAGTCAGTTGTAGTGGGGGTAAAATGG # Right flank : CCCTTATCTTAACAGAAAGCACCCTCACTTTTTGAGGGTGCTTCTTATTGGAGGGTTTTCTTTTGAAACCAGGTATAGACCAGCATGTTTAACAGCAGTACATAGCCGAGTCCAAGCAGAATGTAACCATAAAATCCGATCGTCTGCCCCTCGTCTCCTCGCACAATACTGCTCATCGCTTTTGCTGGCCAGAAGCCGGGTGCAAATGCAAAGAACCATTCTTTGGCATCGGTAAAAAACAGGGAAGCGATCGGGAAGATGATGAGTATGGCAACGATCCCCTTCATCACGGCAAACCCTTCCATTTTATTTTTGGCAAAGGCATTCATCAATAAGCCTACCAATGGGGCTGAAAATGAAGCGATTGCGGAAATCAATATAACTTCCCCCCAGCTCAGGGGGATCAGATTGGAAAACAAAGGGATATAGATTCCGGTGGCAAAGGAGAGAAGCATGGCCAGCCCCAATCGAAAGGAGACAAACTGGTAGATGGGCAGAGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 124-615 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000014.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 124 30 100.0 36 .............................. AAGGAATAAAGTCACCTAAAAAGTATCCTATCCCAT 190 30 100.0 36 .............................. TGTCACAGGAGTGGTTGCAGCGGCGAAAGAAGGTCA 256 30 100.0 35 .............................. CGTGTTTCAAAGGGGTGGAATTGAACCGGTATTGT 321 30 100.0 36 .............................. GATCATCACCCTTTTCAGACTTGTCATCCCCACAGC 387 30 100.0 38 .............................. AGATAAAATAAACCCCTCCCTTTAAAGTGGGAGGAAGA 455 30 100.0 35 .............................. CTCTGAACGGTTGAAACAATCATATCCTGAAGTTC 520 30 100.0 36 .............................. CCATCTCTATGAACCGGCTCCAATGTTTCAACGTCC 586 30 93.3 0 ......G.........C............. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 99.2 36 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GACAACCACAAAATAAAGAAATCACACGGTATAACAGGGAAAACGAACACTCTATTGTTTCCACCGATTTTTTTCTATATGATATAGGTGTCAGGGAAACCTTTTATTTTGGGCTTAAAATGGG # Right flank : CCAAACAAAAAGCCGGATAGGAACTTTTCCCATTGACTATAGTTGTGGATAGCGATCCCCTTGAAAGACTTGCATGCTTTTTTCTGCGCGTGAATGATCGAAATATCTTCTTCCGCTGCGTGAAATCCTTTTTCGTAAAAAGTAACGTATGTCGGTATTTGTTCAGTTGTTTCGATACCTATGACAATTTTAGGGTGAGATAGGTAGTCTATTTCATTTGTTGAAATATCGATAATATCATCAGCAGTATCTCTGTATGCCATGACTACAATATAATTGTACAAATCAATAATACGTTTGTAGTAATCTGACAAATTCGCAATATCTAATGAAATAGCTTCTTCAACTTCTTGAGAAGTATCAAACCAAAAAGGGATCGCCGCCCCAGATTCCAGGTTGTACTTATTTATAGTCGAGATATACTCTCGACTTGTTCGAAGCCATTGCTTCAAAACTTCCTCTCTATCCGTTACATTATTCCAATCCAAGGGGTATCTGAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 285800-284905 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000004.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 285799 30 100.0 38 .............................. AAGGACCGTCTTCGCTCTTCTGTCGGATATAAGTACGA 285731 30 100.0 36 .............................. ATGTATTCTACAGTCCGGTAAAATTCAGCTAAACTC 285665 30 100.0 36 .............................. CTGGTTTGTAGTTTTGGCATCCTGATGGCTCTTTGG 285599 30 100.0 38 .............................. GCATGTCGAGAATGCGCTTGAACTCCCACTCGCTGAAT 285531 30 100.0 37 .............................. GGCACTCAGTGGCAGGGAAGGAAAGGGGACCCTGATG 285464 30 100.0 34 .............................. ATGGCCGTTCCCGCGTTTGCGGCGTTGGCTATGG 285400 30 100.0 39 .............................. GAAAGAGAAAGTAAAATCGTTTTCGCTGTCCTTCCGGTC 285331 30 100.0 35 .............................. CGAAGTCATGGACTACACGGATTTTCCCCTAGTGC 285266 30 100.0 38 .............................. CCTGATGGTTGCAACTCAAAATGTTGATGACTTTTTGA 285198 30 100.0 38 .............................. TGAAGTTGGAAGAATTGAACGTCATGCGTTCCTTGGCG 285130 30 100.0 35 .............................. CCACGAAAATAATTCAATCTTGATTCGATTGTATC 285065 30 100.0 38 .............................. TCGTCTCGGCCTTGTTTCCTCGCTTCGATGGATCGTCC 284997 30 96.7 35 ..........A................... CTTCCTTCCACGATGGGAACCTTCCGCTTAATCCT 284932 28 86.7 0 ..............C.......--.A.... | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 98.8 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : CTTCTTCTAGTACATAGTAAAATATTCATAGGCAAGGGAGAATGGAAAAGCCTCACCGCCAGGGCCGAGTTTACGGCAAAGGGGGTGAGGCCATGGAATGGCTGCAAGGAATTGTGGCGATCATCGTCGCACTTGTGACCATTGCTCGCTTCTTCCTGGAGGGCATGATCGCCATCGGAAGAAGCAGCGTTGACCCTCTGAGTTGGGCAGAAATTAAAAGTCATAGGTAAAGCTGGCACTTTACCTATGGCCACAGGCCCACGGTGGTGGCTTCTTTTGCCTTTATTATACACATTTTTGGTAAAGATATTCAATATACAACGTTTGAGAAGATTGTCGTCGACCCCCAGTAATGCAAAAACCCCCGGAGATCGACGACAACCGCAAAATAAAGAAATCACACGGTATAACAGGGAAAACGAACACTCTATTGTTTCCACCGATTTTTTTCTATATGATATAGGTGTCAGGGAAATCCCTTTGTTTTGGGCTTAAAATGG # Right flank : CAAACAAAAAGCCGGGTAGGGATCTTTCCCACCCGGTTTGTCCAATCTATTCGAATGGTTCGTCTAGTCTATCCATCCACTGCATGGTACATTTTCATACGCGGATGAAAATGCGGGCATCATGTTTATTTCTTGTTAGGATGATTAAACATGTAATTTAAAATTGTTGCAATGGAAGAACAATAGCACTTACCAAAACAACCATGAATCCACGTTCTTTATCTGCCGAACTTAATCCAAACAACATGCAACCCATAAAAATAAGGGAAAATAATATTTGCAATCCCCTATATCGTGTCATTATATATTATCCCTCCTATAGTTAATTGGGGTATCACACGGTATTAGTGAGCAAAAATATCTAACAGTGAAAAAAGGATATTCTTACATAAAACTTTCTTACCCACCTGTTAATGTCATGAAAGTAATTTCAGGCCGGCACCAAAAACGAAATGGCAAAATGGTAGTTCCTATCCCTCGATTGGTGTACACCGCCGTAT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 287419-286859 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000004.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 287418 30 100.0 39 .............................. TATTAAGACGTTCATGCGAATGAGTGAAAAAGACATCGA 287349 30 100.0 37 .............................. AAAAAGTGGCAAAAGAAAAATGGAATCAAAGTAACAG 287282 30 100.0 35 .............................. ACAAGAAAATAAATAAACACATGGGCGAAGCTACA 287217 30 100.0 36 .............................. GAAGTATCACCACTACAGCGGACTGGGACGATTCTA 287151 30 100.0 36 .............................. AATATCTCATCCAGCATGTTGTCCATCTGGCTCCCT 287085 30 96.7 35 ................T............. TAGGGATACGCCGTGTGAGGCGACCCCTGAGCTTT 287020 30 100.0 36 .............................. GCCTCCTAGCAAACTGCCATAACTCCTCGCTAAACT 286954 30 93.3 36 ............G...T............. ACAACAGGAGAACACTTGTTGTACACATTCTGGAGC 286888 30 83.3 0 ................TA..A..A....T. | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 97.0 36 GTTTGTATCGTACCTACGAGGAATTGAAAC # Left flank : GACAACCACAAAATAAAGAAATCACACGGTATAACAGGGAAAACGAACACTCTATTGTTTCCACCGATTTTTTTCTATATGATATAGGTGTCAGGAAAACCTTTTATTTTGGGCTTAAAATG # Right flank : CACACAAAAAGCCGGATAGGAATCTTTCCCCACCCGGTTTCTCCAATTTATCCATAAAAATACTTGGTATTAGAACTGCGAAAAACTTTCATAGTGTAAATAAGTAAGACGACACTCCAAAAATGGGTGTCTTACTTATTTATTATCTATTTTTTAGAGAAAGCAAAATTAAAACAAGAGCTACAACTACAAGCAAGTAAATAGGAATTAAAGAAACATTATAAATCGACTTTGCACTTTTCTCGATAATCCCTGTATCAATTTGAATATTGAACCAACTAACGCTGACAGGGTTTTGGACTTCCATTGAAATATCAGAAAGGTAGAGTGGATTTTTAGAAATAGACCATAAAGTGTAAAGGAGGCTAGACAGGAGTAACACATTAGAAGCGATCAGCTTTTTCACTTATCTTTTTCCTTTCTATATTCAGAATCAATCAATGAACTCTTCTTTTTCACAAATTTTTCTACAGGGTTTGCATCGTACCTATAAGGAAATC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTACGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.00,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 103807-104377 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000010.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 103807 30 100.0 38 .............................. TTTGAAAAAATGATAAAAAGTGTCCGAATCCGGAAGCA 103875 30 100.0 37 .............................. CTATATTGTGACGATGCTTCGTTAATGATGGATGCAT 103942 30 100.0 38 .............................. TCAAAGAATCCTCGCCAGCTAAGAAAGCGAAGAAGACG 104010 30 100.0 37 .............................. AACGTCCCTTTGGTCAGCTGAAGGCTCGCAAGTCACA 104077 30 100.0 38 .............................. TGGTGACGCGCTTCTAATTTTTGCAATACATCCACCAC 104145 30 100.0 39 .............................. GATGTTCCACTGGACTGGATCACCTCCGACACCCGCCAC 104214 30 100.0 38 .............................. ATCGTTCTTGCATTCGATTTAGCTTGGCACGAAGACGT 104282 30 100.0 36 .............................. AAGACTCAGCCATGCTAAGTCCAAACTTGATGTCAT 104348 30 80.0 0 ...........G...GCA.......AG... | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 97.8 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TTTGTACAGGCGCCCTTCTGCTAGCCCAAGCTGGGCTATTGGACGGAAGACGAGCCACGACGCATTGGATGGATCTGGATCGTTTGGAAAATGCGTATCCACATGTACAGGTGCAACGAGGAGTGAAATTTGTGGATGAAGGTTCACTCCTCACATCGGCAGGGATTTCAGCAGGGATCAATATGTCTTTGCACATTGTCAAAAAACTCTGTGGGCCAGACATTGCCAGGCAAACCGCGAAACGGATGGAATATGATGTAGACCTAGACCTCAAATAGCCGGTATACCTGTTGTGCAAGGAAAGAGAGTGGAAAAAGCGGATCACCTTATGGATTGTCGTCGACCCCCAATGGTGTAAAAATCCCCAGGGATCGACGACATTTGTTATATAGCTGATAAGCCCGGTGCAGCGCTATTTAACCGGATTTGATCAATGATGCGACTGTAAGCCAATGTTTAACGCGGTTCTTGAAAAGACAAGTATAGTGGGTATAAAATGG # Right flank : CATTTGGAAGCTGTGTGTTGACAGAGCCCTTCACTCCTAAGAAAGGGAAGAAGGTTTATTCCCACATTTAAGCTAAAGCTTGAAAGAACAGGTTTTCCTGTTCTTTTTCAGATTTATGACCCCTCTTAATAGAGGAAGATGGCCTTGACGATATATCTATACGTGAAAAATAATCAAACATTGGAAATAAAATATTGATTATCCAATTGAAAGTATTATATTATAAATCATGTTAATGGAAATAAGGGAGGTGAAACATTGAAACTTATAATGCAGTTTTCGAAGAATGATGGCATGATTGAACTTCCAATCCATTACAATCACATGTTGCAGTCGTTTTTATATCGTTATCTGAGTGATGATCACTACCGGGAGTTTCTTCATGAAGAGGGGTACGCGTTTGAGAAGCGCAGGTTTAAAGGGTTCACATTTTCCCGATTGGACAGTACATATTCTATCGATTCCAAGCGAGGAGTGATCCGCTTCCAGTCACCAGTCAC # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 113631-114338 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXTI01000010.1 Melghirimyces algeriensis strain DSM 45474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 113631 30 100.0 38 .............................. CTGACTGAACAGCTCGAGGTGGCGGCGACATCGTTTAC 113699 30 100.0 39 .............................. ACTCAAAATCTAAATCCACGAGGGTACCTACACCCCTCA 113768 30 100.0 38 .............................. TTTGTAACTCATCTAATAAAGAAAACGGCGGTCTCAAT 113836 30 100.0 36 .............................. AAAGGAAGATGGACAATCCCTTCAAGGAGGGTGCTC 113902 30 100.0 37 .............................. CGTAATTCTTCCTTTAGTTCCTCGATCCGCTCCATCT 113969 30 100.0 36 .............................. AAATGATGGGCAATATACACGGCTGCCGGATCAAAC 114035 30 100.0 38 .............................. CCTTGAACATATCTACAAACAAGCACCAGACGGTGAAA 114103 30 100.0 38 .............................. CCACAGAAGGCTTTGGGGAGCGGGCTGTCAATGTTCTG 114171 30 100.0 39 .............................. TTGGTATACCGACATGGTTATGTATGAAGCGCCAGTACC 114240 30 100.0 39 .............................. CTGGAAGAGTTGAACCAGATCGAATCACAGGCGATTGAG 114309 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GTGGTAAGTAAGGGGGGATTCAAATTGTTTCGTTATTCTCGTATATGATGTTGGACAAAAACGGGTAGCCAAAGTGTTAAAAACATCACGAAAGTATTTGAATTGGGTGCAAAATTCGGTGTTGGAGGGAAATATCTCACGCGTAAACTATCAAAAATTGAAAGTTGATCTGAAAAGCATCATTCATCCTGAGGAAGATTCAGTGATTTTTTATACTTTTCGTACAACAAAGTATTCAGAAAGGGAAATGATTGGTCTCCAAAAAGGAGGTGAGGAATTCATACTCTGAGACCACATGCGGTTTTCAAATGTTTTATCTGTTTTTGTGATAGAATGTCGTCGACCCCCAATGGTGTAAAAACCCCCAGGGATCGACGACATTTGTTATATGGCTGATAAGCCCGGTGCAGCGCTATTTAACCGGATTTGATCAATGATGCGACTGTAAGCCAATGTTTAACGCGGTTCTTGAAAAGTCAAGTATAGTGGGTATAAAATGG # Right flank : CTCAAAGAGACCTTGAACCGTCGGCAACCTCATAAACTGTTTGTATCGTACTTGTATTCGAGGGTGATTGGTTCTTCCTGATCCAAAATCCCCTCCGCGCAGCGGATTACTATTATGGACCGATGGATGGTCTGGAGATGAATTGGAAAATGAAGTTGGCTAACTACAGTTGGGATTATGGGAATAATCGTTAAAGGAAATGGAAGATTCATAGAGGTGAAGCTTATTAGGTGGAGAGACCTCTCTAGAGGAGTTCCAGCGTCCAACTTTTTATTGTGTTTTGCCGAATGTTAAGCCGTCTTTGATGCAAAAGGAAGGGGGTTTTAATTCCATACAAAAAGCCGCTCCTCACAGAGAGCGGTTTTTATCTGCATTCAAGATAAGACCGGATCAGGGTTTTACTTTATCGATGGGAATGGCAAAACTCACGTGTTTCCAAGACAGCTTGCCGGATCTCAGCAACGTCCTCTTTGCTGCCTACCTTCGACAGATCTTCCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //