Array 1 7457911-7456476 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMGU010000001.1 Streptomyces sp. CRPSP2-6A1 KMCNMMJI_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 7457910 29 100.0 32 ............................. TCACGTGACGGTGAAGGAACGTCACGTGACGA 7457849 29 100.0 32 ............................. GTGCCTTGGCGGCGCCGACGGCACGCACAGGG 7457788 29 100.0 32 ............................. CAGCGTCAGCAGCACCGTGTACATCTGCCCGA 7457727 29 100.0 32 ............................. CCGCTGTCGGACATCTCTGACATCCGCATGGG 7457666 29 100.0 32 ............................. CCACAACCCGCCCTACGACGAGAACTGGCCGC 7457605 29 100.0 32 ............................. TTCTCTAGCCGGGCGCTGCGGATCTTCGTGCG 7457544 29 100.0 32 ............................. GTCGGCCGGTACTACTTCCTGCCCTGGCCCCC 7457483 29 96.6 32 ............................C TGGGCGCCCGCCGCGTCGCCCTGTCCGAGCAG 7457422 29 100.0 32 ............................. GAGAGACGTGGACCACCGCATCAAACCCGGAC 7457361 29 100.0 32 ............................. CGATCCCGGATGATGTGCCGGTGGCCAGCGTC 7457300 29 100.0 32 ............................. TCGCCAGCGCCCTTGATGCCGGTACGCCACGC 7457239 29 100.0 32 ............................. CCGGTGATGGGCGGCAGGAGTGCCAGGCCCAG 7457178 29 100.0 32 ............................. GAGTCAGGCTGCCGCTGGAGATGTGGCCCGTC 7457117 29 100.0 32 ............................. GCTCATCGTCATGACGGCACTGCCCCCGCGCG 7457056 29 100.0 33 ............................. ACCTCCCCGGCTTCGATGCTCGCCGCGATGTTC 7456994 29 100.0 32 ............................. TTCCGCCGGGCGCAGGCCACCGCCTCGACGGC 7456933 29 96.6 32 ............................C GGTGCTGCACAGGCACCACCAGCTGGCGTAGC 7456872 29 100.0 32 ............................. GTGACGCTGTGGGAGACCGCCCGCGTCGCCGT 7456811 29 100.0 32 ............................. GACATTGTCCCCACGCTTCCGGGACAGGAGGA 7456750 29 96.6 32 .T........................... TTCGCGGTCATGATCTGGTACGCGCCCAGCGC 7456689 29 96.6 32 .T........................... TTGGCAGTCTGCATCTCGGCCCGGATGTTGGG 7456628 29 96.6 32 .T........................... CCGGGGGTGGCCCGGGACTTGATGACAATTCC 7456567 29 96.6 34 .T........................... GCGGCCTTCAGGGCTTGCCAGGGTGGTCGTCAGT 7456504 29 75.9 0 ....A.C.TTT.......A.C........ | ========== ====== ====== ====== ============================= ================================== ================== 24 29 98.1 32 GCCCGCTCCGCGCAGGCGGAGGTGAACCG # Left flank : CACGCATCGTCCGCGACCTCCAGACCCTCCTCGCCCCCGACACCCCCCAACCCGACCCCGACGAAACCCCCGACGAACAACTCGTCGACCTCTGGGACCCCGTCACCGGCCCTCTCCCCGGCGGCACCAACCACGCCTGACCCACGACAGGAGCATCCCGGCCTGTGCCCGCCATGACCGTCATCTCCGCCACCGCCGTCCCCGACCACCTGCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACCCCTACCCTCTACATCGGCACCATCTCAGCCCGCGTCCGCACCGAACTCTGGAACAACCTCACCGCCTGCCTCACCGAAGGAAGCGCCGTCCTGGCCTACCCCGCAACCAACGAACAAGGCTTCACCCTCCACACAGCCGGCCCCCAACGCCGCGACCCCCTCGACTTCGACGGCCTCACCCTCATCGCCTTCCAACACCTCCCCACAAGTCAAGGAACTGCAAAGACCCTATAGAACCGCAGGTCACGAAGG # Right flank : CCGTTGCGGTCAACTGGCCACGCCCACGACGAATGGTCGCCACCGATCATCAGGAACCTACGATCCCGCACGGCATCCACCGAGCGCCAGCCACCCGACTCCAGGTTGTCGCGCCCTCGTCAGCAACAGGGCGTACCTGGAGCTCGCAGTGGCATACAAGGAGGAAGGGGCGCCCGTCAGCGGTCGGAGCCCTCTGGGACTTCTCTGAGACTTCCGACCCCATCAACCGGCACGAACTAAAACAGCTGAAAGACCATTCATGCAGGTCAGAAGCCATCAGTCACTCGTAGCGGCAGGTCACCGCCCTCACTGGTCTCTTCCGGGACAACCGACCATCGAGAACCAAGTACTCCGCAGAGCGTCGCCCCCTCGGCCCCACTGCACCGAGTCGGCCAGCCGCGACTCCGCAGCAGCCAGAGGTGCGCTGGCCGGCGCCCCACGCCGCACCAACGAGGCCCGGCCACTCCGGGCTCCACCCGGCGGCGGCCCTGCCCGGCCCG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCGCTCCGCGCAGGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 7467846-7472496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMGU010000001.1 Streptomyces sp. CRPSP2-6A1 KMCNMMJI_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7467846 28 100.0 33 ............................ GCCCTCTGCTTGCAGGACGCGGAGCAGTAGATC 7467907 28 100.0 33 ............................ GCTGACAAAGGGTGAGGGGGTACTGCATACTCT 7467968 28 100.0 33 ............................ ACGACTGGGTGAGGACTCGCGCGGGGCGTATCC 7468029 28 100.0 33 ............................ ACGACTGGGTGAGGACTCGCGCGGGGCGTATCC 7468090 28 100.0 33 ............................ GCCTGGTCAGATCCTCCTCGTTCAGTGCAAGCG 7468151 28 100.0 33 ............................ GCCAACCCGAAGACCAACCCGACCTGGGTCGCC 7468212 28 100.0 33 ............................ GACGTACGCGGTCGTCTCCCCAGTCGGCACACA 7468273 28 100.0 33 ............................ GGCGTCGCATGCGGCCTGGTCCATCGGTTCGGT 7468334 28 100.0 33 ............................ GAAGCCCGCGGCTGCCGCACCGACCACGTAACT 7468395 28 100.0 33 ............................ GGCACCAGCGTGGACCGACGGGCGTTCCTCGGC 7468456 28 100.0 33 ............................ GACCCGTGGGAAGCATGGCTCACCTTCGGAGAC 7468517 28 100.0 33 ............................ GCCGCACACCTTGCCGTTCGCGGCCTTGTACTT 7468578 28 100.0 33 ............................ AGTCCGGCACCGCGGGCAGCGCGGGCCGTGTAC 7468639 28 100.0 33 ............................ GGCTTCGACCCAGCCGACATCAGCGACGAACGC 7468700 28 100.0 33 ............................ AGCCCCAGACACCGGGAATCGTCATCGGCTTGC 7468761 28 100.0 33 ............................ GGCTTCCGGTCTCGGGTGGACGACGCTGTCGGT 7468822 28 100.0 33 ............................ GGATTTCGAGGACTACTCGTGGGAGTACCTTCT 7468883 28 100.0 33 ............................ GCCGCCTCGGGTGACGGCGCGGCGCACGGCGGC 7468944 28 100.0 33 ............................ GACGTCCTCAGCCACCCGCAGTCCATGGCGTTC 7469005 28 100.0 33 ............................ GCCGCAATGCGCGGCCGTCATCGTTGCAAGCAT 7469066 28 100.0 33 ............................ GTAGTCGAGCCCGATGACGTTGACCAGGTAGGG 7469127 28 100.0 33 ............................ GCCATGTGGAACGTGTGAGAGCGACGAGACGAT 7469188 28 100.0 33 ............................ GGGGCCCGTCAGAGCCCCGCAGGGGGCCCGCAC 7469249 28 100.0 33 ............................ GGTAGTGGTGAAGGCGGTGCGCTCGCGGCGCGA 7469310 28 100.0 33 ............................ GGTGGGTTGCTGGTCGGTGGTGGCGTGGGCGGG 7469371 28 100.0 33 ............................ GCCGCCGCTCTGGCACCCCCTGGCAGTCCTCGG 7469432 28 96.4 33 .................A.......... GCTGAGCGAGGCGCTGAAGGCCGTGCGCGAGGT 7469493 28 100.0 33 ............................ GGGGAGTGGGGGCACGAGCCGCTGTACGGCCGT 7469554 28 100.0 33 ............................ GCCCCCGTGCGGTCGTTCAGCGTCTACGTCGAG 7469615 28 100.0 33 ............................ GTCACGTGACGATGTCCCAGCAACGTCACATGA 7469676 28 100.0 33 ............................ GCTTCTGGACGAGCTGACGGCGGAGCTGAAGAC 7469737 28 100.0 33 ............................ GCGATACGGCTACGTGTACGGCGGGCGGGTTTC 7469798 28 100.0 33 ............................ GTTCCTCCCGGGGGCGTGATGATCCTGCCCCAG 7469859 28 100.0 33 ............................ GCCGACCAGGTCGACAACGTCATCGACTACGTC 7469920 28 100.0 33 ............................ GGCGAGGGGTACGCGGGTATCGCCGCGTACTAC 7469981 28 100.0 33 ............................ GTTCACGCAGTTCTCGTTGTCGTCCCGGGCGAC 7470042 28 100.0 33 ............................ GCGCACCCGCGGCCCGCGGCGGGGGCCGGAACC 7470103 28 100.0 33 ............................ GTACAGCATCCCGATCGGCTCGGACGGTCAGAT 7470164 28 100.0 33 ............................ GTGGATGCGGGCGTCCTCGTCCACCAGGAGCGA 7470225 28 100.0 33 ............................ GGGGGTTAGTTTGGCACTTTGGCGTGCGGTCTG 7470286 28 100.0 33 ............................ GTTCGCGTACATGGACCGGCACCCTGTCGGCGC 7470347 28 92.9 33 ......................GT.... GGCTACCGAGCGCCTTCATAGCCTTGCTGGGCA 7470408 28 100.0 33 ............................ GATGGCCCATCCGCGCTTCTCGACCGGCTTCAC 7470469 28 100.0 33 ............................ GCAGGTGTGCCGCGCGGTCGCGAACTTCGTCGC 7470530 28 96.4 33 ..........T................. GCGGCGGTGACACAGGCCCTCGACGCCGCGAGA 7470591 28 100.0 33 ............................ GTCGACGGCGAGGGTGCGATCGGTGACGGTGAG 7470652 28 100.0 33 ............................ GCGCTCACCCGACTCCAGCAGCGTGAGCCGAAC 7470713 28 100.0 33 ............................ GCTCGTCGACTCCTTCTATGCCGGTGACACCAA 7470774 28 100.0 33 ............................ GGACCAGGACGGCGCCGATCACCATGAGGCCGG 7470835 28 100.0 33 ............................ GCCCTCCGCAACGGCATGGTCGGCCGCGCCGCG 7470896 28 100.0 33 ............................ GACTGACTGCCGTACCCCTCCCGACGCTATGAC 7470957 28 100.0 33 ............................ GGCGGTGGATGGGCGGCGGGCGGCGACGCTGGC 7471018 28 100.0 33 ............................ GTGGTTACTGAGCGTTGCCGTGGGTGGTGCGCT 7471079 28 100.0 33 ............................ GTTCACCGACCAGCAGCGTGCCGCCATCGCTGC 7471140 28 100.0 33 ............................ GGCGGAGGCAGAGAAGGCCAAGCAGGCGGTTGT 7471201 28 100.0 33 ............................ GCCGACGGCCACGCCACCGCAGACCCTGTTCTG 7471262 28 100.0 33 ............................ GGAGAGCTGCCCGGTCGTCATGGACTGCACGTC 7471323 28 100.0 33 ............................ GCCCGGCATATTCACCGCCAAGAGGCCCACCAG 7471384 28 100.0 33 ............................ GTCGACGAAGCGCGAGCGACTGGACGCACTGGA 7471445 28 100.0 33 ............................ GGCACCCTGGAAATCGTGCCTTACACCCCTCGG 7471506 28 100.0 33 ............................ GGTCATGCCGGGTCGTACTCGTCGCCCCACAGC 7471567 28 100.0 33 ............................ GCCCGTCAACCGATCAACGTCGCAGGCTGCATC 7471628 28 100.0 33 ............................ GATCCTCGGGGGGCTTCCGTGCGTATTCATGTC 7471689 28 100.0 33 ............................ GCCCGATTGCCAGTTAGCTACAGCTCCAGGGCC 7471750 28 100.0 33 ............................ GACCTCGCCCACGGCCTCGGCCGCATCGACCGA 7471811 28 96.4 33 .........A.................. GAACTCGGCGTCACGATGGCACTCGACCGCGGG 7471872 28 96.4 33 ...T........................ GGCCGGCTTCTGGCTCGGAAGCGCGGGGCACTC 7471933 28 96.4 33 .G.......................... GGCGGACCCGGCCACCACGGCGTTCGGGAAGTT 7471994 28 100.0 33 ............................ GGTAGATCGAATCGGCATCGAGCACGACGTTGA 7472055 28 100.0 22 ............................ GCGGCCCTCAGCTGGCGGAGTC Deletion [7472105] 7472105 28 100.0 33 ............................ GCCCTCGTTCTCCACGGACACCCAGTGGCTGTT 7472166 28 100.0 33 ............................ GTCCCCCAGATCGAAGAAGTCCAGCCCGGCGCT 7472227 28 89.3 33 ........T.....A..........G.. GCGGTCGCGGGCGCGGACCAGGCCGTGTTCCTC 7472288 28 96.4 31 ........T................... GCCCCGCCGGACACCCGGCGGGGCTCTTTGG 7472347 28 96.4 33 ..................A......... GAGGCCGCGTACAGCGGGCCGGGCCGCCGGAAG 7472408 28 96.4 33 ................T........... GCGGCCGACATGGGCATTGAGGGCGGTACGGAT 7472469 28 82.1 0 A.......................GCTG | ========== ====== ====== ====== ============================ ================================= ================== 77 28 99.2 33 GTCCGCTCCGCGCAGGCGGAGGTGAACC # Left flank : CGCCTTGAACGCATCCGGCACCTGCGCCTGGAATGGTGGCGTGATCTTCCCAAGATCATGCAGACCCGCCCACCACGCCAGCACCGCTCGCGCCTCGCCCACACCCAGCCCAAGCTCCCCCGCGACGCGCTCCCGTAACCGAGGGTGCAGCAGGACATCCCACAGTGCGCCGAACACCGCTGCCACGTCCAGCAGATGACAGATCAAGGGGTACGGATACGGCAGTCCCCGCTCCTTGCCCCACAGCCGCACATCCACCTGGTCCGGGACCACCACATCGCTCATGCCGAGAACTTCTACCAGCAGCCACCGACAACACGGCCCCACCTGCGGACTCCCCACCGCCGTCGCCATGGCGGAGATAGTCTGACTTCTGTCACCGCCGTGGCATGTCTCTCTGAGACGCTGCGATTTGACCGAGCTCAGGGAGACTCTGAATGCACCGCAACAGCTTTGGTAAAGGAAGTGTCAACCTCCTCTGACATCGCAGGTCAGGAAGT # Right flank : GCGGTGCTGGCCGGTGGGGTTGGTGCAGGCGACGACCGCTCCGCTGGCACGTAGGTGAGCCGCAGGGGCGCCGCAGCTGAGGCGGCACCGCATGGTGTTCATAGCGCGAGCGGAGCTGCGACGTACCGCGTCCTGCGCTCTTAGGCGGGCCACGAGTGCTCTCAGCGTGCGCGTAGGTGAGCCGCGGGCGGGGAAGGGGCACTCCGCTTGCGCGGAATGTTCTCCGTGTGAGCAGACGTGAGTCGAGCGGTGTACTGGCGCGCCTGATCGTTCTTCGTCGGCCAGCGTCATGTCGAGAAGGGTGCGTTGCTGTTCAGCGCGGCCCTTTGCGTCGCCGAGGAGAGCGGTGCTGGCGCCCTCCATTGCGTTGGCGATCCGCGATCCGCGTTCCGCATTTCTACGCGATGTTCCGTTTGCCAGGACAGGCGCTTAGAAGGCACCTGCTCTATCCACTGAGCTACGAGGGCTGACCTGCGAAAACGCAGCTTCCTGCTGCTGTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCAGGCGGAGGTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //