Array 1 873489-874067 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016043.1 Edwardsiella hoshinae strain ATCC 35051 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 873489 28 100.0 33 ............................ TGACCCGTTTCTCCTTGGCGCGCTCAATAACCG 873550 28 100.0 33 ............................ TGGCATCCTGCCCATAGCGCCCTCGGGTATCCG 873611 28 100.0 33 ............................ CATGAAAGTCCCCTCCGGAACTAAGACTGAGGA 873672 28 100.0 33 ............................ TGTGGCCCCCTCCAGCGACTCATACTCCTGACC 873733 28 100.0 33 ............................ TAAACTAGGGACTGATTATTATTTTTATATACG 873794 28 100.0 33 ............................ TGGCGCTCCGCCTGCTACCGATGCAGATGACCG 873855 28 100.0 33 ............................ CGGGCCCGGCAAGCACTGGGCCTAACTCAATCG 873916 28 100.0 33 ............................ TGCCGTTATCAGGCGCATGGTGGCGGAGTATCC 873977 28 100.0 33 ............................ CTGATCCAGATCGCTCTGGCCATTTACCGCCTG 874038 28 85.7 0 ......................C..AAT | T,A [874058,874061] ========== ====== ====== ====== ============================ ================================= ================== 10 28 98.6 33 GCTTTCCCCACGACCGTGGGGGTGTTTC # Left flank : GAACCTCTGTATCGATCTTGCCTTTTCCCTGACGCGTGAGATGGCGGGTCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATCGAACTGAATTTGCTTGCGAGTGTAGCCAGAGATATACCACAGCTACTTGGAGGGGTAAATATTGATGCTGATAGTGCTAGCTAACGATTTACCTCCAGCAGTTCGAGGACGAATGAAACTTTGGTTTATTGAACCGCGGCCAAATACTTTCGTTTCCGGTATCAAGGATTCGGTTGCTGACACGGTGATCGAATACCTTTATCAACACTGCTCACCGGCAGCGGGGGTGGTGATATTTAAAAGCGTTGCTAGAACACCGGGGTATCAGATCCATACTATAGGATCACCGACCAAGACGCTCTGTGAGATAACTGGCCTGCAGTTGGTGGTAGAAAAGCGACTCGAGCAGCAAGTCAACTACAATATGTAGTTGGTTTAGTATGTTCTTTAACAAGATAATGGG # Right flank : TGCCGTTTGTCCAAGTGACCTCGTTGTCTTTCCCTACCGTCCTCAGAGAGCCCTTATCTACCTCTTGTGGCTCTCGATGTCCCCGACGTACAGCAAAGAGAACCCTAGGACTCTCAGTATCAGCTATGAGGGGGACGCTTCGCCTCAACGGCACTGTCAGCTAAAAACTCCTCATCCTGCTAATGTCAGCGCCTGTGATATAAAACAGTAAGATAGGGGGCGGAAGATGGATGGTCCTAATAATTAGATGACAATATTGCTAAAAATACCCTGCGGATAGTCAGTCTAGATCATAAAAACTGGTTGTTCTTCGACTCAGGCCACAAAGGTGAGCGCGGAACGCCGCTGTACAGTTCGAGTGGTACATGTAAACTGAACGGCGAAAACTACCACTGTCATTTGTTTGACGTCATAGCTGACTGGCAGGTGACCCAGGGCAGTGAGTTGCGGTCATGTCGGGTCATACTGGTTTACAAATAACTTGTCCTGAACAATAAGGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTCCCCACGACCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1740981-1740587 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016043.1 Edwardsiella hoshinae strain ATCC 35051 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1740980 28 100.0 33 ............................ CTCACTGGATGCCATTGCCAGCAGCACCACAGC 1740919 28 100.0 33 ............................ TCCCTTTGCGCGTGGTCGTCGCCTGGACGATGC 1740858 28 100.0 33 ............................ TCAGTACACGTAGCTCTTGCCAGTGCAGGCAGT 1740797 28 100.0 33 ............................ CGCTGGGGACACAAATTTGCGAAGGAGGTAAAA 1740736 28 100.0 33 ............................ CAAGGAAAAGCCGCATGAACGTTCATGACATGA 1740675 28 89.3 33 ............T.........G.G... TAGACCGAAGTCGGCCAGCTACTCTGTGAAGCG 1740614 28 89.3 0 ..............C...A.....C... | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.9 33 GTCTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : GTTAGTCGAGCAACCAGAGAGAGCGCATCGGTGAACTGATCAGCAGCGATCGCCTTGTAGCTTACACCGAAGTGCGACTTGAGCGCCGACCACAGACTGATGGCCGCCTTAGCGCGTTTATTCTGTGGCAAGGCATCGACCCGAGATTTGACCAACGCCTTGAGCGTGCCTTGCTGCTCGATAGTCAGATGAACCGTAGGGAGCGAATGAGGCTGACGAAGCATCGCCTCCATGCGGTTGAACTCGGCGATATAGGCCTCTTTGAACGCAGCGGCCTTCTTACCGGTAAAGCCCATGACCAGAAAGACAAAACCGTCTTTGGTCATTTCGTAGTATTTGGAGTCCCGGTTTACCGCGCCAGCCTGGATGTTTTTCACGTGGGCTGAAAATTCAGCCGACGCAAACTCCGGGGAGCAATCCAGCCTTTCAATCTTCTGGATAACGTTCTTGTGCTGCTTACTCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : CGGCTCAGATTACAATACGCCCCCTCTACCCCTCATCCTGCAAAGGCTCGTCGCACTGGTTAGCCGCCACCATTCGCGGATCGATACTTGCGCTCCCGAACACCCCCATCTGTGCGCAGTAATTACGCTGCTGGACAGCGTACTCCACCAGCACGTCATCGGTGCAATGCTCGATAACCTGCATCCACTCATGGCCGGCGCGACGCCATAAGCCTCGCTGCTCGCACCGTTCGGCATTGAGCATATGCTCCTGGATCTGGCGCAAGTTGTGGTGACGCCATACGATGGGCTTACCCCTCATGCTCACCTCCCCGTAACCGCTGGCGGATCTGCTCCAGAAACGCCACACCGACCTGATAAAATCCGGCCCCCCCGGTGGGATCAAGCTGATCGGCTATCGCGGGTGGACGCTGCACATGCACCAGCTGCTTCACCGGTGTCGGGATACGCTGGCCAGCACGGATATTCCGTTCCCAACGTTGCATCTGCGCCTTGATCGC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1746864-1746287 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016043.1 Edwardsiella hoshinae strain ATCC 35051 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1746863 28 100.0 33 ............................ TTGCCATTGCATGATTTGGCGACCTATGAAGCA 1746802 28 100.0 33 ............................ CACAAAAATAGACCGTTGGTAAGTGTTTGTATA 1746741 28 100.0 33 ............................ TGTAGATCCGTTGTGATTCATGGTGATACCACC 1746680 28 100.0 33 ............................ TATGTTGTGGCCAAAGTTGTTAGATCTGGATTC 1746619 28 100.0 33 ............................ TGCCGACACCTCACGCAACATCCTAAAGCTGGC 1746558 28 100.0 33 ............................ TCGATTAGGCTGATAGAGCAGCGCGGGCGCTGC 1746497 28 100.0 33 ............................ TTATGTCAGAGTCTGCTATGACATTCATGATGC 1746436 28 100.0 33 ............................ TCAAAGAGAGCGAGGCAAAAAACACCTATGCCG 1746375 28 100.0 33 ............................ TGGAGTTTATCCCTTGGATGGGGCAGGCCTTTG 1746314 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 33 GTCTTCCCCACGTCTGTGGGGGTGTTTC # Left flank : GTGGTCACTCGCCGTTATTGGCTGGTCGATGTCGTCACGAATGACAGCGCAACTGGCCTGCGATGCACTGCAAATGGCGCTATGGCGTCGTAAACGCCCGGAAAACGTTATCGTTCACACTGACCGTGGGGGCCAGTACTGTTCAGCAGATTACCAGAGCCTTCTGAAACGACATAATCTGCATGGCAGCATGAGTGCAAAGGGTTGCTGCTACGATAACGCCTGTGTAGAAAGCTTCTTTCATTCGCTGAAAGTGGAGTGCATCCACGGAGAACGCTTTATCCGCCGGGAAATTATGCGGACGACGGTGTTTAATTATATCGAGTGTGATTACAATCGGTGGCGTCGCCATAGTGCCGGTGGCGGTCTCAGCCCGGAACAATTTGAAAACGAAAACCTCGCTTAGGGCGGTGTCCACATTATGTGGGTAGGATCAATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : CGTTTAGCGGTCGTCGCCTCATTCAAGGCATTCACCCGTAAGGTTCGCTCCAACGATTCGATGCGCGCCGTATTACGTAAAATACCGCGCTCTGCCGCTCCGATATTGTCGCGCAAGTTCTGGCTCAGCTCCGGCTCAGCCTGCTCTAACTGCGTCATCCAGCGTCCGATATTCGTCGCTGCCGTCAAATTGGCCGCCCGCAACAGCAATAACTCGTCGTTCAGTTGCAGCAACTGCGCGTCCTGCATAATGTCATCGGGCCACAGCATGCGGCGAGCATAAGCGCCATGAGTCACCGCCGCCGTATTGTGCGGCAGAAAAGGACGGATGGGCGGCGCGTGACGTGAGCCGCGAATTGGTTTTTCTCCGGAAGAAATCGCGGGATGCACGCCTGCGTACCGCGTCACAGCACCCTGTCTAGGCTCACTTTTTATCGGTACGCATTTTTTCCTCTGTTTTTTCTGCGTACCTTTTTTGCGTACCTGCGTACTTTTTTGCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCTGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACGTCTGTGGGGGTGTTTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //