Array 1 366-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTF01000100.1 Streptobacillus moniliformis strain B10/15 contig_91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 365 36 100.0 30 .................................... CATCTTTTACCAATCCCTTGTGATTGAGTT 299 36 100.0 29 .................................... TTAAAAATAATAATTAAATCCTAGTTTTA 234 36 100.0 30 .................................... CACTTTTCGATGTTTTTCCGCTTCTATTTT 168 36 100.0 32 .................................... GATAAGGATGGTCAAGTTTTACGTAAGTATGC 100 36 97.2 30 ...................................C AGCCGCTCTGATCCTTCACGCACAAGGGCT 34 34 86.1 0 .G...................G........C...-- | ========== ====== ====== ====== ==================================== ================================ ================== 6 36 97.2 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : | # Right flank : A # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 6309-8123 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTF01000043.1 Streptobacillus moniliformis strain B10/15 contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6309 36 100.0 30 .................................... ATATCTCGGCTTCGTTCTCATATTGTTCAC 6375 36 100.0 30 .................................... TTCTAAATAACAGAATGATAAAAAGAGAAA 6441 36 100.0 30 .................................... TTTTTTTGCCAATTCTTTAATCTCTTTCAT 6507 36 100.0 30 .................................... TTCCTTATAGAATTTTATGGAATGAGTGGG 6573 36 100.0 30 .................................... AACAATCCCCATTAGTGATACTACGGTTGA 6639 36 100.0 30 .................................... ATAAAAAGCAATGGGAACAGATGAGCGCAG 6705 36 100.0 30 .................................... GATTAATAGCTAATTTAGTTAAATTAATAG 6771 36 100.0 30 .................................... AGTACATTTGGTATTTTGTTTGTAACTTTT 6837 36 100.0 30 .................................... AATTTTGACTATTTTAATACAGCAAGAATA 6903 36 100.0 30 .................................... TATAAAGCTTTCATTTAATTGAACTTCTTT 6969 36 100.0 30 .................................... AAAATATAAGTATACAACTTAATGAGTTTA 7035 36 100.0 30 .................................... CACGTTTGTTCAAATAGCAAAACAAAGAAA 7101 36 100.0 29 .................................... TAATAATTCTTCATTCGCTTTTGCAAAAT 7166 36 100.0 30 .................................... TATAAAGCTTTCATTTAATTGAACTTCTTT 7232 36 100.0 30 .................................... AAAATATAAGTATACAACTTAATGAGTTTA 7298 36 100.0 30 .................................... TATTCAATAACTATATTTTCTTTTGTTCCT 7364 36 100.0 30 .................................... ACGTTACTCACCAGTCCACCATGTAGTCTA 7430 36 100.0 30 .................................... CACGTTTGTTCAAATAGCAAAACAAAGAAA 7496 36 100.0 29 .................................... TAATAATTCTTCATTCGCTTTTGCAAAAT 7561 36 100.0 30 .................................... TATTTTTTTTATAGTTTTTATGTAAAATCT 7627 36 100.0 30 .................................... AAAAAGAACGGGATTTATATGAAACAAAAA 7693 36 100.0 30 .................................... GGCCCCTTTCATCCTTCAATCACAAGCGAT 7759 36 100.0 30 .................................... TTCCTAGATTTAAAGATTTTTACCCTTTGT 7825 36 100.0 29 .................................... AATAAAAGAAGATAGGAGATAAAAAATGA 7890 36 100.0 30 .................................... CTTTACAAGCTCTTAATGTACTTCCGCTTC 7956 36 100.0 30 .................................... AAAAAATGAAAGATTTTTGTATAAAAATGT 8022 36 100.0 30 .................................... TTCAAGAATTTAAAAATGAAGTAGAATATA 8088 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 100.0 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : GTTGGAACAAAGAAAGTTGTATCAAAAAGGGATACAGATTCTTGGTAAATTTGAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //