Array 1 327350-324167 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCXE01000001.1 Bifidobacterium adolescentis strain ca_0067 Scaffold_0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 327349 33 100.0 34 ................................. AGCCGTGGCAGTCCGGCACGTGTTGCTCCCAGTC 327282 33 100.0 33 ................................. TCCAAAGAAATCGGGCTGAACGACTTCGAGCTG 327216 33 100.0 35 ................................. ACTTCCGTTTCGCCACGCATGGTGCCGTGGAACCG 327148 33 100.0 33 ................................. AAGGCGAAAAGTCGGTCAAAGTCAAAGGGCATG 327082 33 100.0 34 ................................. TTTAATCACATGATTGACTGGCGTGGTGACTGCT 327015 33 100.0 34 ................................. GGCAGGGGCGCATGTACAGTGTGTATGTCGGGAA 326948 33 100.0 35 ................................. CTCGTAATGTCATTTTAATTACCTCCATTAATTGT 326880 33 100.0 34 ................................. AAGAGCGCTTGGAAAATCAGGGTACGCCCCACTG 326813 33 100.0 35 ................................. AGTTATGGTCCCCACTGGCTGGCGAATGAGTGAAC 326745 33 100.0 35 ................................. GGGTCGAAATCGAATTCGATTGGCAGTGCGTCGGC 326677 33 100.0 34 ................................. CACGGTGGCGAATTTCAGCATCGCGGCCACGCCG 326610 33 100.0 33 ................................. ATATCGCTTCGGTAGCTCAGTGGCAGAGCACGA 326544 33 100.0 33 ................................. AGCCACGCCGCACTCGCAAGCAGGCAGTGGAAA 326478 33 100.0 34 ................................. TATCTCAACCGGAAGGTACGCCGTCTGCGCCGTA 326411 33 100.0 34 ................................. CTGGCCGAGGCGCGCCACATGGACGCGCAGACGG 326344 33 100.0 33 ................................. TGGCCGCCGACGATCTGTCCACGGCGCCATTTG 326278 33 100.0 35 ................................. CTGCGAGTCCTTGTCGAAATAGCGGATCACGTAAG 326210 33 100.0 34 ................................. CCGCTTACACCAACCACTGCGCCATATCCGTTGA 326143 33 100.0 34 ................................. GAGATGAAGGATGGTGTTGAATCATGGCGTATGA 326076 33 100.0 33 ................................. ACTTCTGCTGCTCCAGCCATCGCATGACGCGGG 326010 33 100.0 32 ................................. ACACCGCTGTGCTCCAACAACGTTTCCATCGG 325945 33 100.0 35 ................................. CAACAATCCAACGTCGGATAACGCAGCCCAGGCCG 325877 33 100.0 34 ................................. AGAATCAGAATCAAGCAGTTTACGCGGATTACGC 325810 33 100.0 33 ................................. ATTTCCACTGCCGCCGGTGTCGTCGCGTCCGGT 325744 33 100.0 33 ................................. ACGATCGTGTCGACGATGACGTCCACGAGGCCG 325678 33 100.0 34 ................................. CGTCCGTGGTGAGGCTCATCGTGTTCCTCCTATC 325611 33 100.0 34 ................................. CCGAGCCTGTGCAACCGCGATTACGAGGGCGACA 325544 33 100.0 35 ................................. TGTGCAGCAATGCGCGCCGTTTGGAGATAGAAGAA 325476 33 100.0 35 ................................. ACCAATTCCGCCGCCTACAACATGATGAAGAACGT 325408 33 100.0 34 ................................. TACGACACGATGGAATTATCCCAGGCATTGCTGC 325341 33 100.0 32 ................................. CTTTGGATGCGATCACGGCCGTGGCCGTCCGT 325276 33 100.0 34 ................................. GAAAATGTATTTTCCGCCGCCGGCCCCGTTGCCG 325209 33 100.0 34 ................................. TGTGAAAGTCACGGAATAATCATGACCACTCGAC 325142 33 100.0 33 ................................. ATCGTGCGTGATCGACTGGACTTCGCGCAAGCC 325076 33 100.0 35 ................................. CACACGCTCAACAACGAATACGCTTGATTGTATCG 325008 33 100.0 35 ................................. CGGCCTGTCGGATGACCGCTTCGCGGGCGTCCTGC 324940 33 100.0 35 ................................. TGCGCGGCCGTCATGAAACCGATAAGCGCCGTCGT 324872 33 100.0 34 ................................. CAGCATTGTCAGTTTCGTGCAAGTAGAGGTTATC 324805 33 100.0 35 ................................. TGCGGAGTGATGGCGGTTTCGCCATACTTGCGCAG 324737 33 100.0 34 ................................. CTCCGGATAGTGCAACACCTCGTGCAACGACGGC 324670 33 100.0 34 ................................. ACCTACACCAAGGCGGACGGCGTCAGCTGGGAGA 324603 33 100.0 35 ................................. CGCCGTCACCGGAAACGTTGGTGGCGTGGTCGGAG 324535 33 100.0 35 ................................. GCCAACCAGTCGAGCCGCGCATCGGCCCACTACGG 324467 33 100.0 34 ................................. GACCCCCGAGAACGCTGCTCCCATGGTCAAGGCG 324400 33 100.0 35 ................................. AATGTTTCCGCATCGGCCTGTTCGCGGAGCTCTTC 324332 33 100.0 33 ................................. AAATGGAGCCAGGGGGAGAAGAGCCGGAGTCTG 324266 33 100.0 34 ................................. ACGATAAGCGTGTACGACCGGACCTTCACTACCG 324199 33 84.8 0 ....T........T.....A....T.....G.. | ========== ====== ====== ====== ================================= =================================== ================== 48 33 99.7 34 GTCGCATCCCATACGGGATGCGTGGATTGAAAT # Left flank : TTAGCGGAGATTATGGATGAATCAAGAGATAGTCTTCGTTACTATAATCTTGGAACGAAATATTCTTCGAAGATCGAGCATCGCGGAAGGCAGCAACATTTGCCGGTCGATGATGTGATGATGCTCTGATGCTGTTTTTGAGTGCTGTTTTTTAGTAGATGTCTATAGCCGCATGGGGAGGGCACGGAAGAGACAAAGTAAAATAGTCCGAATCACGTTGCTGTGGCTGCAAATAGAATGATTGCGTTTAGCATCGTATTCATGCTGTCGGTGCGAACATTGAGCTCTCATGAAACACTCGTTCTTTCGCACCACGATTTAAGAATATTTGGAGACGATTTTGTTCTTCTAGCAGTTTGATAACTTAAAAGTGGATGAGTGCTTGATGTTCTATAGTCCGAAAATGCATACTGAGAGATGTTCGGGAATATCTGCGATATAATCAGCTCGAAGAGCGGGCAAAAATTTCCATATTATGGAATGCAATGTCCATTCTCGCA # Right flank : GGTCCGCTTTTGAACTGTCGTTTTTTGATTTATCGCTCACTTCACATGACATATGTCGGTTTGGTCAGTTAATTTGTGAATATTCGACCATACGACTAGAGTGGCCTGTGGCTTTCCGGTCGGCTTCTTTGCTGGCTGGAAGTTTTGCACAGACTTGATTTGTATCTGCCGTGTGCCTGCGTTGTATTTACATCGCGCCAGCATGTGTGCGGAAGCAGATCGCAAGCGAATGGTTCTCAGTACCATCCATGTGAGTCAAGCACACATCTTTTGAGAAGCAGTCGCGATGCCGGGAGTCGGGTTCGTCGTAATTCAAACGTCGCGTCCGTTCCCGGTTTTTTATCTGGCATACGGTGTCACTGCGGGAAGTGAGAATGAGTTCCGCGCCCGCTACGATGAACAGTGCAAACGATTATTACTTGTGTGTGGGGGGCGTTCTAATCTGCGGATGGCGGAATCAATTTACCCGATTGGTGCTCATCTTCGCGTTCTCGCAGGTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCATACGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.10,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //