Array 1 1634503-1625808 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085047.1 Corynebacterium sp. 20M1046 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 1634502 29 100.0 32 ............................. ATGAATGGCACCATTTTCCAGGATATTGAAAA 1634441 29 96.6 32 ............................T TGTCAAGCCGTCGCCGCAAATGAAGGAAGATT 1634380 29 96.6 32 ............................T ACGCGCATCATAAAGAATCAATTTATCATTCT 1634319 29 100.0 32 ............................. GCCGACTGGGACGCTACCTGGCGGAATTGGAT 1634258 29 100.0 32 ............................. AAAACCTCGAATACCTAAAGCGTATCCCCGGC 1634197 29 100.0 32 ............................. AATTTCCATGCCGGAACATCGGAAAGGTATGG 1634136 29 96.6 32 ............................C GCCTGAGCAAACACGTCAAACGCCGGCGTCAC 1634075 29 96.6 32 ............................T GGTCTGGAAAGTGTCACCTGCGGTTGTACCGG 1634014 29 96.6 32 ............................T CGCGTGGATCGGACTTTCACCCTGGAGACATA 1633953 29 96.6 32 ............................T GTCCCCAGTATCCTTCGCGCCGGTGCGCACCT 1633892 29 96.6 33 ............................A TATGAGGGGGAGTGAATCAATTTGGTACATGGC 1633830 29 96.6 32 ............................T TGTGCAACCATCATCGCCCGGGGCGCGCCCTT 1633769 29 96.6 32 ............................T ATGCGTCGTGTGCTCCACCGTCACCTCCTGGC 1633708 29 96.6 32 ............................C GTGCAGCCCCGCCCCCGATACGGACACTTCGG 1633647 29 100.0 32 ............................. CCCGCCTGGGATGCCATGGTCATCGGCGCGAA 1633586 29 100.0 32 ............................. GCGCCGCACAACACACACCACAACCACAAAGC 1633525 29 96.6 32 ............................T CTGGGACGGCCGCAATGGGGCTAATACCGGCA 1633464 29 96.6 32 ............................T GGCACGTATTCTTGAAACTTCTTCGGAAAAGG 1633403 29 100.0 32 ............................. AATGGCAGGCCTCCAGCGGAGGCGTTCTGTCG 1633342 29 96.6 32 ............................T CTCAGACGACGTGTGCGTATGGGTCCTATCGG 1633281 29 100.0 32 ............................. TCCACGTTCGGGGTCAACGAGTCGGTGTCCCT 1633220 29 96.6 32 ............................T GGCGATCTTCTCCCGCGACAACCCACCCACTG 1633159 29 100.0 32 ............................. CGGGGATGCGGATCCGGTTTTTCACCCCAGAA 1633098 29 100.0 32 ............................. TGCCCACCGGCTATTTGCCATATACTCAGGTA 1633037 29 100.0 32 ............................. AGCTGGGTCGATCCGACCCGCAGCTACTCATT 1632976 29 96.6 32 ............................T GGACCGAATTCGTCAAATCAGGCGGCCTAATC 1632915 29 96.6 32 ............................T CCAAATAATGGCTAGCCGCAAAAGCCGACTCG 1632854 29 100.0 32 ............................. CTCCCCGCCCACTAGGCAGTGGTCAATATCCA 1632793 29 100.0 32 ............................. TGACGTTTGAATTTCCGCGACTTTACGGTCCT 1632732 29 100.0 32 ............................. AATAAGGCTGCGTCCGATGTGGCGCAGGAGGT 1632671 29 100.0 32 ............................. GGGTTGCGCGATGACTGAGCCGCGAAAAGATC 1632610 29 96.6 32 ............................C GCGGCATTGACCACCCCAACAAACCCGGGGTC 1632549 29 96.6 32 ............................T GGTCGCTGGTGCTATCTCACGGGGTCATTTAT 1632488 29 96.6 32 ..................A.......... CGACATCAATGCGAGGCTCGCTGCTAAGGGGC 1632427 29 96.6 33 ............................A CTTGGCTTTAGCATTGACCGGCAAAATTTGATC 1632365 29 100.0 32 ............................. ACAGCCATACTTAAAGTCGGCATCATCGCCGA 1632304 29 100.0 32 ............................. CGCTCATCGTTGGCTACCAGGGTGCTCCACGC 1632243 29 96.6 32 ............................T CTGGTCGAAGCTCACGCCGGAGCCCATGCCAG 1632182 29 100.0 32 ............................. CGTAAATGTCCGACGGGTCAACCATCGTGACC 1632121 29 100.0 32 ............................. GTCCTTAATGTTGTAGCTTCCAGACCGGGGGA 1632060 29 96.6 32 ............................T TTCTCCGAGTGCTCGACGAATTTCCACGAGTG 1631999 29 96.6 32 ............................T CGGCGCATAGACAGTGCAGGCGTCTTCCAGCG 1631938 29 96.6 32 ............................C GCGTTGACGGCATCTTCGCTGCGGTTGGGGTG 1631877 29 96.6 32 ............................C TTTCGCCATTCCTCGTAGCCGAGCAGTGGCAT 1631816 29 96.6 32 ............................T TCCGCCGCCTTGACGTCAGTCTTGAGCTTATA 1631755 29 96.6 32 ............................A ATTTGTTCGCCTTCGTCGACGTCCCAGGTGAC 1631694 29 96.6 32 ............................T AATGGGCCAATCATCAGAAGACGCCGGGGTAC 1631633 29 96.6 32 ............................T GTATGTTGCCTAATTTCGGCCTCACACAATTC 1631572 29 100.0 32 ............................. GGAACGGAATTCCGGCTACTGTCCAACCTGCT 1631511 29 100.0 32 ............................. GAATACTACGACAAACTCAACAAATTCTACGA 1631450 29 100.0 32 ............................. AACGGCCTGCCGCCCGCGAGCTGCTGGACTAC 1631389 29 100.0 32 ............................. GCGCTTCCGATTTCGGCTCTGAAGTGAAATGG 1631328 29 100.0 32 ............................. GCCCGTCACGAACGCAAAATGGCCCGAATTCA 1631267 29 100.0 32 ............................. GTCAAGCGCCACATGGGTGGTGCTACTCAAAA 1631206 29 100.0 32 ............................. GGTAACATCAGGTTTCCTGTATAGGCGGGTTG 1631145 29 96.6 32 C............................ ATCCAGCGGTTTGGTGAGCAGGTGCGTGATGG 1631084 29 100.0 32 ............................. CTGGCAGGGGTGTGCAGAGCAGTGTCGATGGC 1631023 29 100.0 32 ............................. TATAGGGCTGCCCACACACGCTCGCCGACGTC 1630962 29 96.6 32 ............................T ATGCGTCGTGTGCTCCACCGTCACCTCTTGGC 1630901 29 100.0 32 ............................. AAAAGCACCACAGAATCGCCCGGATGTACCTC 1630840 29 100.0 32 ............................. GACGACCTTGCCCTCGATGACCTGCGCATCGA 1630779 29 96.6 32 ............................T GACTCCCATTCTCGCACATCTGCAAAGAATGC 1630718 29 96.6 32 ............................T TTAATCTCGGTCAGCTGGCAGGACATATCCAG 1630657 29 100.0 32 ............................. GCCCGCCCCCGGCCACGGTTGCGGATCCCCTT 1630596 29 96.6 32 ............................T TTCCGCCCCAATACGGTCCCCTAGAAAGAAGT 1630535 29 96.6 32 ............................T GTCACAAGTTAATCCAACTACCAGCAGAAACG 1630474 29 100.0 32 ............................. CAGCCGGGCCGGACGATAAGCCGCTAATTGAC 1630413 29 100.0 32 ............................. TCCCGCCGGGGCGGTACCCACAACCGAATACG 1630352 29 100.0 32 ............................. ACACTCGGGAGCTGCTGTTTTTGGACTCTGCT 1630291 29 100.0 32 ............................. GACGAGCAAAGTTTTCCTATTCCCCTGTATTT 1630230 29 100.0 32 ............................. AGGCTGAAGAGCATTCGGGTAATGCTGGATTT 1630169 29 100.0 32 ............................. CGGCCGAGCCGCTTGCCGCCGTCGATGAGCCG 1630108 29 96.6 32 ............................T AGGATGCTGACCCTACTGCCTCTAAAATACCG 1630047 29 100.0 32 ............................. CAACGGTCGCGGCCAATGGGTCGGCGCAATCT 1629986 29 96.6 32 ............................T GCTTGTCCCAGCTGTTCGTCGGACCGCGAGCC 1629925 29 100.0 32 ............................. GACGTTGCCGTCACGCTCGGTGGCGCGCTGAA 1629864 29 96.6 32 ............................T TGTCGAAGTCATGCGGGCGGATATGCCATTTA 1629803 29 100.0 32 ............................. ACTCCCCGGTGATCGGGTTCCTGCTGGACGTG 1629742 29 100.0 32 ............................. ATCAAGCGCCACATGGGTGGTGCTCAAGCAAA 1629681 29 100.0 32 ............................. TTCCCGGTCGTCAAGCTCAACAAGGACCAGGT 1629620 29 100.0 32 ............................. TCGTTGACCCAGGGGGCCCTGATCGACGCGGT 1629559 29 100.0 32 ............................. TGGTTCAGTCCAGACAAAAGAAACGGGCTACA 1629498 29 96.6 32 ............................T TCCGCGCGACTTCCACGCGAATATCGTCATCA 1629437 29 100.0 32 ............................. CGGACCGGGCGACGACAGCGGGCGATAAGGCC 1629376 29 100.0 32 ............................. CTGTATGAGCGGATTCCGGAGCAGATGCTCTA 1629315 29 96.6 32 ............................C CCGTCTAGGGTCATGGCGGACAGGTCACGCGG 1629254 29 96.6 32 ............................T ACGCCCCGGTCGATGATCAGACAATCTATGTG 1629193 29 96.6 32 ............................C CGTTTCGGCACCATCACTAACCAACAGCGGTA 1629132 29 100.0 32 ............................. CGCATGGCAATTCCTAGGGAAGGGCGGAATTG 1629071 29 100.0 32 ............................. ACGAATGGCTGATTGACCATGGCTTATTCATC 1629010 29 100.0 32 ............................. TGCCCCATTCCATGCGGCGGTCACTGCATCCC 1628949 29 96.6 32 ............................C GTGGAACCCGTTGGCCATGTATACGTTATTCG 1628888 29 100.0 32 ............................. TCGCCCGGAATTCATATGAGGGCGCTTACCGG 1628827 29 96.6 32 ............................T CCCTGGCGATGTAATCGACAAACTCGGGGCGC 1628766 29 100.0 32 ............................. ACCACCACCCAAAAAACCGCCCACGGCACCAG 1628705 29 100.0 32 ............................. TCTTCGATGCCCTTATTCGGGTCGTATTGTCC 1628644 29 96.6 32 ............................C CAATTTCGTCACCATCCTCACCCACGACCCGA 1628583 29 96.6 32 ............................C TCTGCTTGTGCCTGTTGCATGCGCTGGGCTGC 1628522 29 100.0 32 ............................. ACTCTGCCATCGTGTCGGGCATCCTGACGATC 1628461 29 96.6 32 ............................T TGTCGAAGTCATGCGGGCGGATATGCCATTTA 1628400 29 100.0 32 ............................. ACTCCCCGGTGATCGGGTTCCTGCTGGACGTG 1628339 29 100.0 32 ............................. ATCAAGCGCCACATGGGTGGTGCTCAAGCAAA 1628278 29 100.0 32 ............................. TTCCCGGTCGTCAAGCTCAACAAGGACCAGGT 1628217 29 100.0 32 ............................. TACCGCCCGGCCTATGCCACTGTGGTGGAATC 1628156 29 96.6 32 ............................C TCGTAGACCACACCGGACAGTACATCCAGGTA 1628095 29 96.6 32 ............................C TAAGTTGGAGTCGCTGCGCAAGAACGCCAACG 1628034 29 96.6 32 ............................T GTCCTGGCCCTTCTTGTGGATCTCGGGGGACA 1627973 29 96.6 32 ............................C ACGCGCCGTGCTTTCTCCACCTCATCCAGTCC 1627912 29 96.6 32 ............................T GAGTGGGTCAATTCGGTCGAGGGATTTACCGC 1627851 29 96.6 32 ............................T CAATTTGTCATTCTTGGACCGGCCTTCCTCTT 1627790 29 100.0 32 ............................. TCACAACCGGACGGCTCAAAAAAGCCGGGTAT 1627729 29 100.0 32 ............................. GCAGTATCGAAGACCGGAAGCAAAAGGCGTTT 1627668 29 96.6 32 ............................T CAGTATCCGGCGGGGCAATACGCGCATCATAG 1627607 29 96.6 32 ............................T AATTCGCGGCGGCAAGGGCACGCCCAATTGCG 1627546 29 100.0 32 ............................. GTTGACGACGGCTTCTACGATCACCCAAAGAT 1627485 29 100.0 32 ............................. CCCTTGTCATTGGCATGGGAGACAATACGCAC 1627424 29 100.0 32 ............................. TGTCACCTGCGGTTGTACCGGTAGGGGGTGAC 1627363 29 96.6 32 ............................C CCACGAGCACCGCACAGTAGCTATCCCCCGGG 1627302 29 96.6 32 ............................T GCTCAGGTGCGGATGCTGGCGCGCGTGGCGCT 1627241 29 93.1 32 .....................T......T TTCTCGGGGTCGACACCCAGCATAGTGAGATA 1627180 29 100.0 32 ............................. CCGCCCGCCTGCTGGGCCTGACCCGTAACGGG 1627119 29 100.0 32 ............................. CGGCCGGGCCTTCCAGCTCCTTGGCACGCTGG 1627058 29 100.0 32 ............................. AACAAAATCGGTGCTGTAATTGAGGAAGCGCG 1626997 29 96.6 32 ............................C AATAAGAACGGCCAGCTGGTGATGCGCAGCAT 1626936 29 96.6 32 ............................T ACACCGGTGATGGGTGGAATAGGGAGACGCTA 1626875 29 96.6 32 ............................T AAGGCGGGCGACAAAGCCCAAGACGTCTGCCA 1626814 29 100.0 32 ............................. TCAATCACGCCACGGATGACGGCCATAATCAC 1626753 29 100.0 32 ............................. CGCGCGCCCCGGCACCAGTAGGCGACACAACG 1626692 29 100.0 32 ............................. ACGACCGCACTGATGGCGTTCGGCATGGGTAC 1626631 29 100.0 32 ............................. ACGACCGCACTGATGGCGTTCGGCATGGGTAC 1626570 29 96.6 31 ............................C TGCGTGCCGTCGGGCACATAGCCCGTCGTCG 1626510 29 89.7 32 .G...T......................T GACCACCCCGCTGACCATCACCGCCTACCTGG 1626449 29 100.0 32 ............................. CCCCACAAACGGCGACTGAGACATTCGTGCAA 1626388 29 96.6 32 ............................C CCCATCGCGGGCCCCTCGGCTTTCAGGGCGTT 1626327 29 100.0 32 ............................. CTCTGTGCGTAGCAGCCCGCGCGTGCGACGAC 1626266 29 100.0 35 ............................. CGCTGCGATGATTTCGTCGGGCATCGTCTCTGCGA 1626202 29 100.0 32 ............................. GGCTCGTATGCCACGAATGCGGGACCACCTGC 1626141 29 100.0 32 ............................. CGTGTCCAGGCGATCACCGACGGGCGGATCAC 1626080 29 100.0 32 ............................. AGATCGACTTCCTTAGTCTTGACCTGCCCGTG 1626019 29 100.0 32 ............................. GCCTACACCCTATCCTCGCTGATCGCCTTGCG 1625958 29 100.0 32 ............................. TTGCCGTGCAGGCGGATCAGGTTCAGGAACAG 1625897 29 100.0 32 ............................. GAACTGGAATCCGCAAACACGTCCATGCGGTG 1625836 29 93.1 0 ...........................TC | ========== ====== ====== ====== ============================= =================================== ================== 143 29 98.4 32 GTTTTCCCCGCGTAAGCAGGGATGAGCCG # Left flank : ACCGCCTGTCCCGCAGGATTACGCGGTGACCTAACAAAGTGGGTCATGGAAATCACCCCTGGGGTCTTTGTTGGGGACCCAAGCGCTCGAGTACGCGAAGAAATCTGGGAGCGAACAACCGAACTTTGCAAAGACGGTAGAGCGCTACTCATTTGGAGTACAAACAACGAGCAAGGAATGGAATACCGCACCCACAGGCATGACTGGGTCCCCACCGACTTTGATGGACTGACACTGATGATGCGCCCGCAGAAGGATCGCCAGGGCCCAAAGTATGGGCAGCGAACCGGGTGGAGCATTGCCAGAAACGCGAGGCGGCAGCGCAACCGATCCTGAGTTCGCCGGGTGCTTATGTCGAGGACCTAGAAGACGAACACGTCCTCGACTGAGCTCTCTTGCCCTCGATCACGTACCAGTTGAGGGCCGCCGACGGGACTGGAGCTGGAAGCAAGTTATATCTAAACTGGGGTGAGGCTCTGCATCGGCGCTGGTCGCCGAGT # Right flank : CAAATTTTTGCCGTATGCCGAGTCCCCATAGCTCTCTTTCGCCAGCAGGGCTGGGGCCGGTGTGGTGGGATGATGGATCATTTACTGAAATCAGTTATCTACCTTAATTATCTGTTTACACCATGTGGCCAAAACAGGAACTAGTACGACTCTCTGTGGGCTGCCTCGCGAAGGGAGAATATATCTTCGTTGAATAATCTCAAGTCCAAGACGAAGGAACCACAACCTTCATCAATGTAGAATCGTGTTGAAAAGTAGAAAGTAAACCAACCAAAGCAGTATTAATTTAGAAGGGGAAATTCTATGGAGATCATCCCGGCAATTCTTACCATCATGTCTTCGGCGTGTGAAGCTCCCGCTCCTGTCACTTACGCCCTAGCTGCCGTGACTGTATTCTTCCTTTCCAAGGAGACGTTCACCATGATTCGTACGTATAACGCTTCCAAATAGTAATGCCGACTTCGATCAGATGATGCTCCTCAACCCACCACCCCAGCAGA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTAAGCAGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //