Array 1 2848456-2844762 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPOG01000001.1 Algiphilus aromaticivorans DG1253 U743DRAFT_scf7180000000006_quiver.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 2848455 29 100.0 32 ............................. CCGTCGCGGGTCGCGGGCAGCTGGAAGCCGAG 2848394 29 100.0 32 ............................. TCCGGCGTGCCAGCAGCGACCGCCGTCGGCGT 2848333 29 100.0 32 ............................. CGCGCAGCCTTTATCCGGGAGACTTCCTTCTG 2848272 29 100.0 32 ............................. CGCTGATGCAGGTCCTGGAAGGCCGCGACCCG 2848211 29 100.0 32 ............................. AAGAATGAGGAGCCCGCTCGAGGCGGGCTTCA 2848150 29 100.0 32 ............................. GTCTGGCCGGGCAGCACGTCCTTGAGCAGCGC 2848089 29 100.0 32 ............................. TTGTCGATGACGCTGATCTCGCCCTTCACCTG 2848028 29 100.0 32 ............................. GCCCGACCGACTGGCGCGAGGCTATTGCGCAG 2847967 29 100.0 32 ............................. TGCCGGCCCGACATCATCGCCGGCAACCGGAT 2847906 29 100.0 32 ............................. ACGCTGTGCGAGCTGGAATGGAGCCGGCAGGT 2847845 29 100.0 32 ............................. CCTTCGGCGCTACGCGCGAGTTTCCGCTCGGC 2847784 29 100.0 32 ............................. CGCGAGATCCCCCCTCGGCTGGGAGCGGGTCT 2847723 29 100.0 32 ............................. GGCGGCATCGTCCCGGTGGTGGGCGTCGATGG 2847662 29 100.0 32 ............................. ATATCCGCACGACGCTGCGATACGCGCATCTT 2847601 29 100.0 32 ............................. ACGGATGCCCTGCAGCGGGTAGTCTGACTCGT 2847540 29 100.0 32 ............................. GTCGACCCGACGATGATCCCCGATGGCGTTGG 2847479 29 100.0 32 ............................. CCTTCGAGCAGACCCTGGGCGACATCAGCCGC 2847418 29 100.0 32 ............................. CGCTGCGCCGCAACGCGCAGGGCGTTCACCAT 2847357 29 100.0 32 ............................. ACCAAGCACCAGCTGACGCGCGAGGCGCAGAA 2847296 29 100.0 32 ............................. TCGTTGTGGTTGAACGGCGTCGGCCGGTCGTC 2847235 29 100.0 32 ............................. GACGGCTTTAGTTGCCGCCAGCCGCGCCGCGC 2847174 29 100.0 32 ............................. CACCTCGGTTTCGCGCAGCAGCGGGTCCAGAC 2847113 29 100.0 32 ............................. GTCGACCCGACGATGATCCCCGAGGGCGTCGG 2847052 29 100.0 32 ............................. GAGAACCTGGATGCGGCCATCGTCGCGCGCGA 2846991 29 100.0 32 ............................. CCCTGTTCGTGCTGCTCAACTGCCTGCAGGGC 2846930 29 100.0 32 ............................. ACCGCACCCCGGGCAGCCTCACGCGCTTCACC 2846869 29 100.0 32 ............................. AGCGTCGGCGATATCGGTAACCGGGAATCCGA 2846808 29 100.0 32 ............................. ACATCTGGGATTTGTTCCGGGCCTGGTGCCTG 2846747 29 100.0 32 ............................. CGCACCAGGTCCGGAAGAACGACGGCTCGCAC 2846686 29 100.0 32 ............................. ATCGCCGCCCACGTCGTGGATGCTGGAATCGA 2846625 29 100.0 32 ............................. AGCGACGCAAAATCTGTGTCGCACCGGAGGAG 2846564 29 100.0 32 ............................. ATCACTCACCACGTCACCGATGACCCTGACGC 2846503 29 100.0 32 ............................. ACCGAATCAATCATGACGACGACCTCGGCCGG 2846442 29 100.0 32 ............................. GACGCGCTCGACGGCCGAACGCCTGACCAGGT 2846381 29 100.0 32 ............................. TAAGCGATGATGTGCGCGATCTCGCCGTAGAC 2846320 29 100.0 32 ............................. GTCACCGACTTGGGATCGTCCAGCGAACAGCC 2846259 29 100.0 32 ............................. GGATCGGGGCTGCGGCTGACCTCGACCCAGCC 2846198 29 100.0 33 ............................. AAGCCCGGCGTACAAAGAAACCTCGTCGATCAC 2846136 29 100.0 32 ............................. CCATCCGCCGCAAATCCGGCCACGCCAACGCC 2846075 29 100.0 32 ............................. GCCAGGATGGCTATTGGTCCCGCATCATCGAG 2846014 29 100.0 32 ............................. ATTCCTCGCCGATTTGTGTCATCTCGGTCGTA 2845953 29 100.0 32 ............................. CACGCGATGCTCCTCGACCAGCTGGAAAAACT 2845892 29 100.0 32 ............................. CAGCTCGCCGATCGCTTCCGCGATCAGTACTG 2845831 29 100.0 32 ............................. GCGTGGGTGACGCCCCGGCCCCCGGAAATGAT 2845770 29 100.0 32 ............................. CCAGGACCACCACGCCGAGCGCCGCGACTACA 2845709 29 100.0 36 ............................. AACTCGCACGCCTGGCCGCCGAGTATCGCCGCCTGG 2845644 29 100.0 32 ............................. CTGGCGCAAAACGGGCACGTTGCTAGTGTCGT 2845583 29 100.0 32 ............................. GGTAATAGCTTTTATCTTTTGCTGCGGCTTGA 2845522 29 100.0 32 ............................. TGCCCCGTCGTCTCCATTGGGTCCGGCGGCAT 2845461 29 100.0 32 ............................. GCTATGCCGGACATCTGGCGGCGCCTGGGCGA 2845400 29 100.0 32 ............................. ATCGCGCTGTGGCCCGCGACCGGCAGCCGCCA 2845339 29 100.0 32 ............................. CTCGAACTCTCCCTTGGCGGCCTGCGTCACGG 2845278 29 100.0 32 ............................. ATCGCGCTGTGGCCCGCGACCGGCAGCCGCCA 2845217 29 100.0 32 ............................. CTCGAACTCTCCCTTGGCGGCCTGCGTCACGG 2845156 29 100.0 32 ............................. TCGGCGAGTATGAGGCTCTTGCCAGAGCCCGT 2845095 29 100.0 32 ............................. ACCTTTCGCCGGCGAAAGGCCTTCGTGCGCTC 2845034 29 100.0 32 ............................. GTGCAGCTGGAAAACAGCCTCGGCGGTGCGGC 2844973 29 100.0 32 ............................. TCTCCACCGACGATGACGGCGTCGTCTATTCG 2844912 29 100.0 32 ............................. GAGGATCGTGCCGACGATGTGGCCGATGTTGA 2844851 29 100.0 32 ............................. GCCGGGTCGTAGTGGATGCGCTCGGCGTAGAG 2844790 29 93.1 0 .........................G.T. | ========== ====== ====== ====== ============================= ==================================== ================== 61 29 99.9 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GTGAGATCAAGCCGCCAGAAGCGCACGCAGAGCAAGTCGGCCCCGCCATCGCCAATCCGGAGAGCCTGGGCGACCCCGGGCACCGCAGCCAATGATCGTCATCGTCCTCGAGAATGCCCCGCCGCGACTGCGCGGTCGATTGGCTGTCTGGCTGCTCGAAGTACGTGCGGGGGTTTACGTGGGGGAATACGGTAAGAAGGTGCGCGAGTATCTTTGGGAACAAGTGGAAGAGATGATCGAGGAAGGCAATGCGGTCATCGTCTGGCGCGATTCGGGCAACGATGCTGGCTTCAGCTTTCAGACACTCGGTGAGAATCGGCGGGTGCCGGTTCAGTTCGACGGTGTGTCGCTGGTTGAATTCCTGCCCGAAGCGGCTCTGCCTCGCGAGGGGCGCAGCGATCTTTAACAACCCGGATACTTGCCGGCGGCACGTCGCCTAAATCGCCGGTAGAATTTTCCTTCAAGTTTCTGCCCTTATGGATCAGGCGGTTACGCGAAGA # Right flank : GTCGTGAGGCGCGCGGATACGAATGTTGGTGCGAGGCGACCGTTTCGTTTTCTCCGGCTTAGCGTTTGGGCTACTTGGGGTCCCGAGGGGAATGCCTGATTCGGCGCACAGCGCCCGCGATCGCGAGAACAGCTGCGAGGGTGAAAGCGAATGACGGCTCGCCGATTTCATCGAGAAAAATTGCCAGCACCCCCAGAAAAGCGGCGATAACCGCGCCCCCGATCAGGGTGTCGCCCGGCCGCGGCTGCGTTTTGGCATATTCATGCATCGCAATTTCGTCTATCGGGGTTCGTTCGCGTCCCGGCGCGATCGTTCGGCCATGATGCGCGGTCGTTTCTTGCGTGAGACGGTGATCGAGTGTGCTCATGATCAAGTGGGCCGTAAAGATGATTGCCGCCGCGAGTGCGCAGCAGACGTGCTTGGTCGTCGGATTTTATGGCTCTTCGGGCGGCAGGAACTCAAGCGCTGGTTGCCTTGTTTCAATATGCTTTGGGTCCCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //