Array 1 31361-32735 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMS01000043.1 Streptomyces tyrosinilyticus strain CGMCC 4.7201 sequence043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 31361 33 90.9 28 .............................G.AT CCCCCGGAGACGTCGCCCATGCCATGGG 31422 33 93.9 28 .............................TA.. GGGCGAGGCCGGGCAGGGAGTCGGGTCC 31483 33 90.9 28 .............................AA.A GCGCCAGCACGGCGACCGGGGTCTGAGT 31544 33 100.0 28 ................................. ACGTGAGCGGCACCTCCAATATCGAGTG 31605 33 93.9 28 ...............................GT AACCCCACCATCAGGAGCCCGCGCCATG 31666 33 93.9 28 .............................T..G CGGCAGAGCTGGTCCGTACCCAGTTGGC 31727 33 90.9 28 .............................GT.G AGAACGAATGCGACGGCAGAGCCTGGCA 31788 33 93.9 28 .............................T.G. CGTAGGCGACTTAATGGCCACGCTGCCC 31849 33 90.9 28 ..............................GTG ACGGTTCGAAAAGCTGAGGGTAGGGAAA 31910 33 90.9 28 .............................TA.G CCGATGCCGGGCACGTCCACCCGGGGCC 31971 33 97.0 28 .............................T... GGATGCGGACCCGCTCCGGCAACGCCGG 32032 33 90.9 28 ..............................GAG ACCAGCTCATACGCAACCTGTGCACGCC 32093 33 97.0 28 .............................G... ACGGCATCACCATCGTCCCGGTCTACGC 32154 33 87.9 28 .............................TGAT CGAGTTCGGTGCCGGGACGGCGCAGGAC 32215 33 97.0 28 ................................T CACCGTCGTCCTCGCCGCGCTGATCGAC 32276 33 93.9 28 .............................A..G ACCAGGCCGCCAGGGGCGCCAAGTCCAC 32337 33 87.9 28 .............................TTGT ACAGGTAGATCTCCAGGCCGGGCACCCG 32398 33 93.9 28 .............................T.A. GGGCGGACTCCGATCCACGTGGTGAGCA 32459 33 93.9 28 ..............T.................T GGTCCCCAAGGCCGCCCTGGCGGGCAAG 32520 33 93.9 28 ..............................TA. GGCGCGACATCGACGACGCCGCATCGGC 32581 33 87.9 28 .................T............GGT CCCCCGACCCGGCGGCCTATGATCACGC 32642 33 90.9 28 ..................A..........AA.. GGCCCGTCCTGCGCGTCACGGACCCCGG 32703 33 84.8 0 .........................C...AGTG | ========== ====== ====== ====== ================================= ============================ ================== 23 33 92.5 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCCC # Left flank : GTCGTCCCGAGCCTTTCCCCCTGGTCCCGGACGAACTCCCGGCTCAGCCCCTCCTTTCCCCGGGCATCGCACAATTGGAACCCCGACAGCTTCCCGATGTCATGAAGCCCGGCACACAGGGCAACCAGCACACGTGCCTGCGCAGGATCTGCCTCAGCCCCGAGCCCCACTGCGATGCTCCTACGCTGGTTCCCGGAGAGGTAGTGATCCCACAGATACAGGGCCATAGCCGCCGCATCCAGCAGATGCCGCACCAGCGGATACGGCCGATCAAGCCCTCGGGACTTCCCCCACGCCGACTCGTCCACCGCCCGCCCCGGCCTACGCATCACCGCGTACCCCTCCTACTTGAACTCCGTTGCCCATCGGCCGCATCCAACCATTAAGCACCGACAAGGCCGTCGGAACAGCATGTAATCTGCGCACGTGACCCAGAGGATGCTCTCCGAGAACAGAGTAAAGACACGGCAAAGCCCCTGCTAAGCCACAGCTCAGAAAGG # Right flank : GTGTGCGATCCGCCTTCGCGGCCTTTGAGGGTCGGTTGCCCCGGAGGGAGACCGCCGCCGCGTTCACGGGTCATTCGAGTGCGGCCCCCGCGTCGCATCCCTCGCACGAGCCAGTCACCACGAACGACGGTCCGACCAGGCTACGGGCGCCGAGCCGGCGCTGTGCAAGCAGCTCAGAGAACCTCGATCGCCGCATCAGCCGACACGCGCCTTTGGTAGATGCGCCGACATCGTCACGACGAGGAAATCTCCGCAGGCCACGGCTGGTGCGCTACGACCAGCCCTCGTTCGCGGCTCCTGCCGAAGGCTCGAACCTGCGGCTTGCAGACTCGTTGACCATCCCAGGTCGACGCATTCGCGAACGGTGCTGCTCCCGCTTGTCCCAGATTCCGGGGCTCGCGCGGCGGGCCCGCTCGTCGGACCGATCGACACCATGCGACATCACAGCACGCGGCGCATGCACCAAGTCCCTGGTGCACGACGGTCATCAGCCCGCCCCG # Questionable array : NO Score: 3.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.09, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 17912-16054 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMS01000039.1 Streptomyces tyrosinilyticus strain CGMCC 4.7201 sequence039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17911 28 100.0 33 ............................ TTCCTGCCCGTACGACCGCCTGACGGCCCGGGT 17850 28 100.0 33 ............................ TCGGGGTCATGGTCCCCGACGTGGCCGTGTGCG 17789 28 100.0 33 ............................ GCAGACATGACCGGCAGCCGCAGCAAGCAGGAC 17728 28 100.0 33 ............................ CTTGTTGTAGTTCAGTCCGTGCTCTTCGTTGAA 17667 28 100.0 33 ............................ GCCCGAGGACTGGACGGACGCCCTGGCGTCCCG 17606 28 100.0 33 ............................ CACCACCGCCCCCGACGGAACCCACCTGTACCT 17545 28 100.0 33 ............................ TCCCATGCCGTGCAGCTTGATGTGGCGGCTGAG 17484 28 100.0 33 ............................ GGCGATGGAGGGCACGAAGCGGTGGCGCCACCC 17423 28 100.0 33 ............................ ACGTCCTGCGGGACGCGGAGGGCGAAGTGATCG 17362 28 100.0 33 ............................ GGCGGGGTGGCATCAGCCGCGGAAGAAGGGCGA 17301 28 100.0 33 ............................ GATCTCGCAGTTGGAAGAGTTCAGTGCGCTCAT 17240 28 100.0 33 ............................ GTTCGTTGCGGTGGTGCTTGACCGCCTCTTCGA 17179 28 100.0 33 ............................ GGTCCCCGAGCCGGACATCAGCTCCTCCGGGCT 17118 28 100.0 33 ............................ GCCGGAGCCGACGACGGCCGGAGCCGAGAAGAA 17057 28 100.0 33 ............................ GAACGCGTGAGCGCCCTCAGACGCCCCCGCCCC 16996 28 100.0 33 ............................ GCCTTCGGCGATGGCGAATGCCGAGGGCTGGCG 16935 28 100.0 33 ............................ GCCCGAGCGCACCACGTCCAGCACCATCAACGA 16874 28 100.0 33 ............................ CCAGTGGCGGAGAGAGATCCGCACGACGGAGCG 16813 28 100.0 33 ............................ CGGATTTGGCGCTCCACGAATGCGCGCGGCAGA 16752 28 100.0 33 ............................ CGGTGACCATAAGGCCGGGCTTTTTGACGGGCG 16691 28 100.0 33 ............................ GCCGCGCGGCTGGGTGACGCGCAGGATGCTGCG 16630 28 100.0 33 ............................ CGAGCAGGATCAGGACGGAGACGCGCGCGCCCG 16569 28 100.0 33 ............................ CCTCTGTCTCAAGTCCTCGACGCGCAATCTCGC 16508 28 100.0 33 ............................ TGATCTTGGGGGAAGATCATCTCCCCGGGTGAT 16447 28 100.0 33 ............................ CCCCGTGTTCGGACGCACCAAGCCCGCCCCAGC 16386 28 100.0 33 ............................ CTTCTGGGAGCCGCGGCACCGCGTCCCCAGTCG 16325 28 100.0 33 ............................ AGCGCCGGAGACGAACGGGCGCCGCGCGGCCCG 16264 28 100.0 33 ............................ CCCGTAAAACGCGTACCGCACCGGGCCGAACTG 16203 28 100.0 33 ............................ GGCGTGGAGGCTGCCTACGCCGCGCGCACGGGC 16142 28 100.0 33 ............................ ACGGGGCGGGGCGCGCCGGGACTGACCTCACAA 16081 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 31 28 100.0 33 GTCGGCCCCGCGCCTGCGGGGATGTTCC # Left flank : ACATCACGATCATCGGACCTGAGTTCGATGACCCCGCATCCTCGGAACCCTCCGGATGACCGTCATTGTCCTGATTGCCGCCCCCGAGGGCCTGCGCGGCCACCTCACCCGGTGGATGGTGGAAGTCAACGCCGGGGTCTTCGTCGGCAACCCCGGCCGCCGTATCCGCGACCGCCTCTGGGAACTCATCGCCACCCGCATCGGCGACGGCCAGGCGGTCCTTGTAGAGCCTGCATCCAACGAACAGGGCTGGGCAGTCCGCACCGCAGGCCACGACCGCTGGCGGCCCGTGGACTACGACGGCCTCATTCTCTCCGCACGGAGCAGGCGTTGATCGTTTCCGCCGGGATCATCGTATGGATGCGCAGGAAACTGGAATAAGTAAGACCCCTACAGCTTCTTGGCCACGGACGCACTGGGGCCCCACCGCAGCCCGTGGTCTCGACATCCAACTGAATGAAATCACCATCGACTGCAGGCAAAGGCGCAGGTCATCTAGT # Right flank : GCGCTGGACGGCCAGCGCGGGCGATTGTCGGTCTAAAACTGACGTTCATCGTTGACACCTGGGTCTCCGATCACTACGGAGATCCACATGTCGAAGTCCAACCCTCCGCTCGACCGCGAGGCCAAGCGACGCCTGGCGGTCATACGTCACGTCGAAGAGGTCACCGGAAACGTCGCAATGTCCTGCCGGTACTTCGGGATCAGCCGGCAGTACTACACCTGGTACCGCCGCTATCAGGCCGAGGGCGTCGAGGGGCTGCGCACCCGCTCCAAGGCACCCAAGCACAGCCCCAACGCGACACACGTCGAGGTGGTCGGGAAGATCATCTACCTGCGTCAGAACTACCACTTCGGCCCAGAGAAGATCGCCATGTACCTCAAGCGGTACCACGACGTCACCATCAGCAAGTCCGGCGTCTGGCGGATCCTCAACCGTCTGGACATGGGCCGCCTGCCGGCCTCCCAGCGGTACAAGCGCCACGACCGCCGGTGGAAGCGGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 28171-28686 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMS01000039.1 Streptomyces tyrosinilyticus strain CGMCC 4.7201 sequence039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 28171 28 100.0 33 ............................ CCGAATCGCCGTGCCCGAGCTGACGTACATGTA 28232 28 100.0 33 ............................ GGGGCCGGAGGGCGCGCCGATCCTGGACCCGGG 28293 28 100.0 34 ............................ GCAACGACGTTCGGCAGCACAAAGGTCACGACCC 28355 28 100.0 33 ............................ GAAATTCCGCGGCAGCACCCTGCGCACCAGCAG 28416 28 100.0 33 ............................ TTCCTCGCCTGTGTCGAGGGCCCATTGGAGGCA 28477 28 96.4 33 ...A........................ GCGGTGTCCCCGACTAGGAGATTGCCGAACTCC 28538 28 96.4 33 ........................G... CAGCAGCGACCGTCTCAGGCCCGGTCCTTGTAC 28599 28 75.0 32 ....T.....A..CA..CA.....G... GCCATGCACCACGGACCGCGGCGCCGCGTCGG 28659 28 89.3 0 A............C..........G... | ========== ====== ====== ====== ============================ ================================== ================== 9 28 95.2 33 GTCGGCCCCGCGCGTGCGGGGATGTTCC # Left flank : GCCGCCACCGGTGCCGCGCAACCGTCGGCTCATGCCAGTCCAGCCCCGCCGCACGAACCGCCGCAGCACCCTTCGGCCACATCCGCTGAAAGGCCGGCGTCGCCTTCCCGCAGTCATGCACCCCACAAAGCCAAGCAAAGAATCTGCGCCCTCTGCCCATCCCGCCGGCCACGTCGTCCAACATGCGCTTCGTGGACGGAGCCAGGAAACCGTCCCACATCCGCTCGGCCACTGCGGCAGTATCCAGCAGATGCGACATCAGCAGATTCTTCGTCCCGCCGGCCTTCTCCTCGGACTTCCCCCACAGAACGCCGAGGGCCCTCAGGATGTCCGAACCGCTATCGGGCGCGGGGCTTTGTAACATGTCTCTCCCTAGCTCTGTACGCTAGTTGGGCACCCTAGACCTCACCACTGACAATGCCTCCCACCTCACCGGCAAGCGGGGATGGTTGCTGAATGAGATCGGCGCTGGTCGCGTATAGAAGGGCAGGTCAGCAAGT # Right flank : CGAGCGTCCGGGTCCTCCCGTTCTTCCCTGTCGGTCCCACGCCAGCGGGAAGCAGAGGGCGATGATGCCAGGCGAGCCGGGGCTGGGTCGCGTAGGCGGGCGAGTCCGGGTGCAGGGCCAGCTGTCTGGTCTTCCGCTGGAAGGCAATGGCCAGCCGGGGCGACGCCGGACTGCGTCGGTGCAGGCTGCTCGTTGGTGGTGGCGCTCGTGGACTTGGTCATCATTGCCTCCTATCCGCGTATCCGACGGTCATCATCGAGCTGCTGTTCGCCAGCTTGAGAACGCGCTGAACCAGGTCAGCGCCGTAGATGTGTACAGCGGCGGCGCGTCCGAGGGTGTCGAGGGTGGTCGTGACAAGCGTGGTATCGCCCGCCATGAACTCGCCGAGCGCCGTTGCCCGCATTTCCGCCAGGTCCTGCGGGCTCAGGTCCTCGATACTGGCGAGCTCGGGCAGCGCCGGTCCCTGGTCGTGAGGCTGTGCCAGGGGGGCGAGCGCCTCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCGTGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //