Array 1 825337-830733 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT596207.1 Corynebacterium phoceense strain MC1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 825337 29 100.0 32 ............................. TGTCTGTCCTGTTTCAGTCAAAGTGTTGGCAA 825398 29 100.0 32 ............................. AGCTGCGACGCGATGTCGCCAATCATCGGGAT 825459 29 100.0 32 ............................. GTTGGGTCAATAACCTGCATCAAACCCTTCGA 825520 29 100.0 31 ............................. CCCACTACCTTGCCAGAGCCCTCGCAGACGC 825580 29 96.6 32 ............................G CGGCCTGAGACTTTGCCAAGCTTCCTATGGCC 825641 29 100.0 32 ............................. TGGGGCAAATTCGGTGAAGCCGCGAGCGAGCG 825702 29 100.0 32 ............................. GTCATCCTGTTTGATAACAGTCCAATGGCTCA 825763 29 100.0 32 ............................. CCCGCCCGGCCGTGCTTCCACGTGAACGTGGT 825824 29 96.6 32 ............................G ATTGCGGCGAGTTGTTCGCGGGTTCCGCGAAA 825885 29 100.0 32 ............................. GACTGTCCTCGTCCCCAACCCAGAATTGCTGA 825946 29 100.0 32 ............................. GACTGGGCCCCAGACACCCTATGGCCCCTCAA 826007 29 100.0 32 ............................. TGGTTAGCCACAGTGCCCGCCTGCTGCAAGTC 826068 29 100.0 32 ............................. ACACCGAACAGCTTGATAACGTCCTGCATGGG 826129 29 96.6 32 ............................T GATGTGTGTCTCGTCGCCGTCGAGGTAGCCGT 826190 29 96.6 32 ............................G AAGCTGCTCCGCGAGAACACTGCCGATTGGGT 826251 29 100.0 32 ............................. CCAACTTTGAACGTCAATCTGTTGCACATCTT 826312 29 100.0 32 ............................. TCCGGTGTCGCGGTGGAGGTCGAGCATGGCGA 826373 29 100.0 32 ............................. CATACGGCGTTAAATTGGTCTGGGTGTGCGCT 826434 29 100.0 32 ............................. CCGTCCTTGATACCGGAGATGGAGGCCTTGAA 826495 29 96.6 32 ............................G ACATACGCCCGCTCGCTCTGGCCCTGCTAGCA 826556 29 100.0 32 ............................. TACCTTCCGATTTGGTACGCCGGGGTACGGTA 826617 29 96.6 32 ............................G TCTCACAAGCACGCCCTCGATGATGTGACGGG 826678 29 100.0 32 ............................. TGCTGGCGAATATCCTTAACGTCTGAGATAAC 826739 29 100.0 32 ............................. GGTAGGCCGCGCTAACGGCATCCTCGCCGCCC 826800 29 100.0 32 ............................. GACCCCGAATATTCCTCCGCAGTCCAAATGTG 826861 29 100.0 32 ............................. CCAGGCGGCGCGTCTGCCGACGCATACGGCTC 826922 29 100.0 32 ............................. GCGCTGGCGGCCGAGGACTTCAACGGCACCAC 826983 29 100.0 32 ............................. CAACGACGAGCTCATTACCGGACCCGCGACCA 827044 29 100.0 32 ............................. AGGCCGGTAAGTAGTGCGGTGACAGCGCCGCC 827105 29 100.0 32 ............................. AGTCGTGGCGGCGCTGCTGCAGCGCCGAACAA 827166 29 100.0 32 ............................. TTCGCGTCCTCGACGACGTGCGGGTGGCGGTC 827227 29 96.6 32 ............................G TCGACGGCGAAGATAACCGGTCGGTCGCCGCG 827288 29 96.6 32 ............................G AAGTAATTGCAGGAAGAAATACTACAGGCGCT 827349 29 100.0 32 ............................. TTCCGCGCGGCCCTGAATGAGGTCATGGCAAA 827410 29 100.0 32 ............................. AACACCATCGAGCAGCGTTTGTGCTTCGCTCA 827471 29 100.0 32 ............................. AATCACCATCTGCCCCGGATAAAGACCCGTTG 827532 29 96.6 32 ............................T CGACGCGTCAACACGAGCCTTAGCGGAGTTTG 827593 29 100.0 32 ............................. CAAGCCGGCATTAATGCCGAGATGGCCGCGCA 827654 29 100.0 32 ............................. CCCGGCGGGGGTGAAGATGTGCGCCATCAGGG 827715 29 96.6 32 ............................G CTATCGCGATTATGGCCGACGCGTTCCGCCCG 827776 29 96.6 32 ............................G GCCGAGGGCTAGGGCGCAAGCAGGCCCGTGAA 827837 29 100.0 32 ............................. TCGTGCGCGGGTTTAGCGCTCATTGCGGGCCC 827898 29 100.0 32 ............................. TCGCCCTTGTCATCGAACATGGAGGCGCCGAT 827959 29 100.0 32 ............................. GGGTCCAACCCCAGCCATGTGTTGACCGTTGC 828020 29 96.6 33 ............................A CCACCACCGCCGCCAGTAACACGATCCCAAGCA 828082 29 100.0 32 ............................. CCCGGCACGCTTGTTACCCAACCAGCGGGAAG 828143 29 100.0 32 ............................. TGTCGGTTCGCTTCAGACTCAGCCTTAGCCGT 828204 29 100.0 32 ............................. ACCCTTCTTTGTCGAGCAGCACCGGGCGCGCA 828265 29 96.6 32 ............................G TTCGTGAAACCACGACCGTCCAGCGGGCCAGC 828326 29 96.6 32 ............................T CACCCGTATCTACGGTGATTGTGAAGCCAAGA 828387 29 96.6 32 ............................G CCCTGGGCGGCACGATTGAACGCAAAGAGCAG 828448 29 100.0 32 ............................. CAACTGTTTGTGTTCAGCTTCTTCAAGGACGG 828509 29 96.6 32 ............................G CCACCGCCGCCCCGCGCTACCCGATAGGGGCA 828570 29 100.0 32 ............................. GTGTCCTCGTCGCCGGATGTGGATGTGTCCCA 828631 29 96.6 32 ............................T CAGGGCGCGTCCACGCAGGATACTGTGGTGTT 828692 29 100.0 32 ............................. CGCGCCAATAATCGCGCCCGTGGTCAGTGTTT 828753 29 96.6 32 ............................G TCTCTAGTGGTTTATTCGGTTGTTAGCTCATC 828814 29 100.0 32 ............................. GTCTTAACGAAAGTGAGAAACAATGCGAAAAC 828875 29 96.6 32 ............................G TCTAGCCACGGGGTGGAACATAGAGAAACGCA 828936 29 96.6 32 ............................G TAATGACCCATCGAATCTCGAAGGGCTCGAAG 828997 29 100.0 32 ............................. CGCTCCGGTGTGGCCCTCGACCTGCGCCCCAC 829058 29 96.6 32 ............................G GAGCTTGTCTTCGGGAACTTCCTTGATGTGGG 829119 29 100.0 32 ............................. AGAAGAGGAGGGGCTTTTCATGAGCCTGTCTA 829180 29 100.0 32 ............................. ACCACCGCCGCCGAAGATGCCCTCCGCACCTA 829241 29 96.6 32 ............................G TCTGCGATGCCGGTTGAAACGTCTCCGAGTTC 829302 29 100.0 32 ............................. ATTTTGTGGGGCTTGAGTTTCCTGACGAATAG 829363 29 100.0 32 ............................. TCGATTTTTTGGCCTGCACGCCCCGGGGTGTA 829424 29 100.0 32 ............................. GACTGTGGCCTTGGTAGCTGCAGCGGCTTCGT 829485 29 100.0 32 ............................. TGTATAAATCCTCCACCCGCCCCGGCCGGGTC 829546 29 100.0 32 ............................. GGGGGATTAGCGGCCTGTGCCTACAAGTGCAA 829607 29 100.0 32 ............................. ATAGAGCCCGCCACCGTGGGCTGCGTCTACGT 829668 29 96.6 32 ............................G ACCGCATGGAGAAGGACGGTGTGCCGTTCTAC 829729 29 100.0 32 ............................. TTGAATCCCGTGGCTACCACGTCCCCGGTATC 829790 29 100.0 32 ............................. TAGTTGACGCTTGATCTCCTCCAGCGCGGCGA 829851 29 96.6 32 ............................G ACTGCACCGCTTCGCTGGCACCGTCGAGCTCC 829912 29 100.0 32 ............................. CTGGGCGGGTTGCTTACGACCATTACGCCCCA 829973 29 100.0 32 ............................. GGCGTAAGCGTTGACACGGTACAGGTTCAGAT 830034 29 100.0 32 ............................. TAATCCCCAACAGTTGCGTAATTACGGCAATG 830095 29 96.6 32 ............................G GCCGCCGCGTACGTCGCGCGACCGATGTTCTA 830156 29 96.6 32 ............................T AGGTGCCATAACGACGGCCGTGTCGTCCGGTG 830217 29 100.0 32 ............................. CACGGGCGGCACGGGCTCCCCCGCGCGGATCG 830278 29 100.0 32 ............................. ACTAGGGGAATATGCCGGGAATGATGAGCACG 830339 29 96.6 32 ............................T TGAGGTCGAGCATTGAGTAACCAGGCGAAATA 830400 29 100.0 32 ............................. CCCACAATAGGCAAGCACCTAGCCTAGTCTAG 830461 29 96.6 32 ............................T ACACCGTGCGGGGTGGCAATGAGCCAGATCGA 830522 29 96.6 32 ............................G TCATCACAGAATTTCTTGACTTGCCATTTACT 830583 29 100.0 32 ............................. CCCGCACCGGTCGCGCTCGCCGAAGATACGCA 830644 29 96.6 32 ............................G TGAGGATTACGGGGCCGTGGAATTTGTGGCAT 830705 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 89 29 98.9 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GATGCTGACCTCTTCTTATGGAGCGAGCTCGAAACAGTTGCAGCAGGAGTGAATTGGGATTCGAAAGAGGCTAGCTGGGCATGATGGTATTGGTCATTACCGCCTGTCCTGCTGGCTTGCGCGGCGACTTAACGAAATGGGTTATGGAAATTTCCCCTGGAGTTTTTGTTGGTCAGCCAACGGCGAGAATTCGTGATATCTTATGGGATCGCACTGTTGAATTGTGTAAAGACGGTCGAGCTTTGCTTGTTTATTCGACGGACAGTGAACAGGGAATGGAGTTTAAAACTCATCGGCATGATTGGGTGCCGACAGATTTTGATGGCTTGTCTTTGATGATTCGTCCTGCGTCCGCGGGAAAACGAGATCGCTTTGGAAACGGTAGACGTAGTGAGTGGGCTAAAGCTCGTTTTAAGAAGCAACGCCGCTGAGGTGGAAGCTTCTCGACGGAGTTGGATCTAGAATAGGCCGTGCACTGCTGTTGTTGCTGGTTGCGAAGA # Right flank : CCTTGCCAACCGCCTTATGAAAAGAAACCTTGGGAACTTCCCACATGCGCGGCGATAATGGTGCTCGGTCTACAACGCCGCCAACGCCTCGCCCACGCGCTTGCCGGAGTGGATGCAGCCGCCCAGGAACGTGCCTTCCAGCGCGTTCTTGCCATGCATGCCACCACCGCCGAAGCCGGCGGCCTCGCCGCAGGCGTAGAGCCCCTCGAGCACGGTGCCGTCGGAGTGGAGGCAGCGGCCGGAAAGGTCGGTTTCGATGCCGCCCAGCGTCTTGCGGGTGAGGATTTTCAGGCGCACGGCGATGAGCGGGCCCTTGGATTCGTCGAGCAGCCGGTGCGGTGGGGCGGTGCGCACAATCTTATCGCCCAAGAATGCGCGCGCGATGCGGATGTAGTTGACCTGCGCGTCTTTGCTAAACGGGTTGTCCAGCTGCGAGTCGCGGTCCTCGATGAGGGTGCGCAGTGCGTCGAGTTCAATGCGTTCGTCGCCGGCGACCTCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //