Array 1 47379-48087 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGHKQ010000003.1 Bacillus sp. 165 Scaffold2_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 47379 37 100.0 37 ..................................... AAGGTGTTATTATTGTTTTTTTGTTTTTAGTAGGAAG 47453 37 100.0 38 ..................................... CGTATTCCTTCATGGTGTTAACCCCCTTGTTGTGTGCT 47528 37 100.0 34 ..................................... TATGACAAAGTTGCTTTGGCATATCCCTTTCTAA 47599 37 100.0 39 ..................................... TTTTCTAATGTTTTTTTCATTTTTTTTCTCCTCCTTCAT 47675 37 100.0 36 ..................................... TTCTCTTCTTCTCTTATTTCTTGCATTATTGGTTTG 47748 37 100.0 40 ..................................... AGCCGTCCGGGAGGCAAGCCCGAACGATGTCCTGTTGCAG 47825 37 100.0 37 ..................................... ATTAGAATAATCCCTAAAACTAAAGCGAATTTTGAAA 47899 37 97.3 35 ....................................T TTCAAACCAGCCACTCCAAGAGTCTTCTATCTCTT 47971 37 100.0 41 ..................................... TGAATTCTGCATCTCCTACTAAGACTGCGCTAAAGGTTGTT 48049 37 89.2 0 ......................T..........G.AT | TG [48080] ========== ====== ====== ====== ===================================== ========================================= ================== 10 37 98.7 38 ATAGAAATAAAAAAACCTCGTTCAGAGGATTAACACA # Left flank : AAATTAAAGGATTATGGTGTACGAGTTCAAAAAAGTATTTTTGAAGCATATTTAGATAAAGATAGTTTGGATCAAATGGTAGAAGTAATTACTCCGTTTGTTTTGGAGCAAGATTCATTGCGCATATACTCGCTTAATAAATCTGCATTTCAACAAACTTTAGTATACGGGCAATCGTTTTACTATGATCCTGAAGAAGATGTAATTATATAAAAATGGGTAGTAGAATGGGATAAGTAATAAAATAAAACCATTCTACTACTAAATATGTATGCAGTAAAAAATGCTTAAAAACACACAGTAGCATGTAGGTATTTAAAGATAATAAAATAATTGAAAATCAATGGAGATTAAAAGGGACAAGTAGGTTAGATTTATTTATTATAAAAATATCAAAACCATTTAGTTTACATAATATGTTTTGTCCATAGTCAACATTCTCGGCACCATACATTTTAGCTCTTGAAACCTTTGAGAGAGTAGGGTAGAATAAAGGTACT # Right flank : TCCATTATGTATTATGTGGGACATGAAAAAACACCTCCGCTTGATTCGTATACTACAGATACGAATCAAGCGGAGGTGTTTTTCATTTGGGAACAAGAATTCATTGTCCAGAAGAAAAGAAGTGGAAAGTCATTGAAATAAAGGAAGAGGCTATTCCAATCGAACCATTATGGAAACATCGTTGATTAAAAATGTCACCTAAATTAAAACATGGATAAAGTGGCATCGTACGGATCAGATCCATCAATTTCAACAACCAGTATTTATAGAAACTTAGGCTAGAAAAAGAGAAGGGCTCTGAAAATTATACTGTATTTAAGAAAAGTGACGTGATTCTTTCAACTCTTCCTTTTAGAAGTCAACTGAAATACTGGTTTAACTCTAGTTCTATGAGGTGATGTGTTTAAGTCTATGATATGCTTTCTATTATTGAATTTTAACAATACTATTTTAACAATAAAACATGACCGATGTCATGTTTTTATTGTTATTATCCTTCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGAAATAAAAAAACCTCGTTCAGAGGATTAACACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 50527-50856 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGHKQ010000003.1 Bacillus sp. 165 Scaffold2_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 50527 37 100.0 36 ..................................... AGAATTGTTCAATTCTCTCTAAATCTTCCTCTGTGT 50600 37 100.0 35 ..................................... TATTATAATGCCTTGATTTGGCTTAAAAGGTCTTC 50672 37 100.0 37 ..................................... TGCTTACTCGTTCTCCATAATACTTTATTAATTTTTC 50746 37 100.0 37 ..................................... AGAATGGGACCGGTGAAGCGAACACCAAGTCCTCTAC 50820 37 89.2 0 ...........................A....C..TT | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 97.8 36 GTATAAATAAAAAAACCTCGTTTAGAGGATTAACACA # Left flank : ATTAACTATAGTAACTGAGTTATGTATAAAATAGAGGCAACGTATCAATAGAATTTTCAATGCAGGGTGGGAATATTATACTGAACCAGTAAGAAAAATGATAATCTGTAAGTTATAATACTATATAAGAAAGGAGTTGTCTTTCTTTATGACATGAAGAACTTGGGCGTCAGAAGAAAAAATAAATACTAGATTCTTTAATTAAACTAAGAGATATTCGATCTTTAAAACTTTCTAGTAAGAAAAAAAGTTGATTGCAAGAAACAAAACGACACACCTATAAAATAGGGGGAAAATCATATAAAGCGTGTCATTTGTTTAATATAATAATTTTTGTTTTGAAATAAGAGGAAATTAGATAAAAAACCTCGATTGATATAATGAATTTTTTTGATAACCATAGTTAGTTTACATAATATTTTTGGCCAAATAAAAAAATAAGAAAGGCGTGTAATTTAGCACTTGAAACCCTTGAGAGAGTAAGATAAAATTTAGGTACA # Right flank : TTGAAATTTTGCATTTTAATCTCTATAAACCTATTGGCTTCATGTTGCTAGAATTTATAACGGAACCTTTTGTCGATATACAAAATACAAAGCAAACCACCTAAGTATACAATAGGTGGTTTGTTTCTTTTTGGGCTTTACTAGTTTTTACCTGTTACGGATGTTCTAGCTGCTAAGCATTTTGGTAGGAAGCTTATATTGATCAAGAAGGAACGGGTTCTAACAGAGAAATTTATATAAAATGAAAGAATGTATGAAAGTAATAACACAAATTCTGTAATTGCATATAACTAGAAGGTCTAAGGATAAGATCATTAATTAATACTAAGGAGAAGTGCTCTGTATTGAAAATCGACATTCTATTATTTCTTTAACGGGAAAATCCTGGAAGGTTTGCATGATTATCGGCATGAGGGCATAAGCGGTCATGGATTCGAGGGTTTTATGAAATCAGAGTATTTTTTGTTTAAATTGGTTCATATGGGGATTTTTCACAATTG # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAAATAAAAAAACCTCGTTTAGAGGATTAACACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 68394-67308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGHKQ010000003.1 Bacillus sp. 165 Scaffold2_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 68393 37 100.0 37 ..................................... CGAGGAGCTTTCGGTGATCCTTTCGGAGATGGAAAAA 68319 37 97.3 37 A.................................... TGCAAGGCAATGGCTCTGCATGGGCGGAGTCTATCAT 68245 37 100.0 39 ..................................... ATAGTTCGTTAACACCAAACGAACTAACTACAATTTTCA 68169 37 100.0 37 ..................................... GTAGTAAAGGAGGCAACCCTTCACGCCTCAGCCCTCT 68095 37 100.0 38 ..................................... AGGAGCAAGTTGAACCGATTTTAACGAAAATTTCTCAA 68020 37 100.0 35 ..................................... ATGACTTCACACCTGATTATGTGGCAATCGAAAAG 67948 37 100.0 38 ..................................... GAATCTGAGAAAGAATCTGAGAAAACAGTAAATACTTC 67873 37 100.0 35 ..................................... TTGAAATTTCCATAAAGTCAGGTCGACTGACTGGA 67801 37 100.0 38 ..................................... TAAAGGGGTGTTAATATTTGTTGGATTTTTTTTTGTTG 67726 37 100.0 38 ..................................... TAAAGGGGTGTTAATATTTGTTGGATTTTTTTTTGTTG 67651 37 100.0 40 ..................................... ATGCACCGGCTGATGGAACTGTCTATCAAGTAAAAGATGA 67574 37 100.0 42 ..................................... TACTATTGATAGTGGGGGGGTTTTTGTTTTATTTTGTTCCGT 67495 37 100.0 40 ..................................... TCTCAAGGTAGAGTACTACAAATGAAATAAGTTACCTACT 67418 37 100.0 37 ..................................... AATACAGCAGGGTGTTTCACAATGCCCTGTATAAAAA 67344 37 97.3 0 A.................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 15 37 99.6 38 TGTGTTAATCCTCTAAACGAGGTTTTTTTATTTCTAT # Left flank : TCCCTTTCCTCCTAGTGTACTTGTATCGCCCACCATCTTTTTGCTGTATTCACCATTGATCCACGGACAATATTCATTGATCCGCTCCTCCCCTTTTTTCGAATCGATGGCAACAACAATTATCTCTACTCCATTTTCATCCAAATATTCCTCTAACCTTAACGAGATTCCTCCAACCGCATCTTCATTTTGAAAAACATTTTGCCCATCATGCATATACTAAACTGGATAACGCTTATCTCCCTCATATTACTCTTTCGGCACATATACTCGAATCGTTCGTTCTTGATTGAATGGAGTCATATGTATAACAAAGGTCTCTAACATAAAAACACTCCTATCTTTCTCAAATAGTATATATGTTTTTAATATTGTCATAATTTTCTGTTCTTTCAGAAAAAAATCACAATAGTATTTTATTGCAAAAAAAGACGTGCAAACAATGAGCAGCTTGCACGTCTTTTTATATGTAGTTTATGAGTATTCAGACGATATGCGGG # Right flank : AGTACCTTTATTCTACCTTACTCTCCCAAGGCTTTCAAGAGCTAAAATGTATGGTGTCTCAAATATTGACCAAAGGCAAAAAACATTATGTAAACCAAACGGTTTTTTCTAAGGTTTTCATTATTTTAAGATATAAAAAAAATAACCCTTTATCCCAATTTTATTACTAACTAGTATAATCTATTTTTATTTCAATAAAATAACATGACATACCCCTTTTTTATGCTTTTTTCGTAGCATACGGTTTATATCTTTAAACATATAGCAATAAAAAGAAAGCACAACGGCTCATCTTTGTGTGCTTTCCACTGCTTTTATTAGAAATGTAATCCTCCGCTTACATTTACAATTTCTCCTGTAATATAACTGGATTCATCTGAAGACAAGAATGCAACTGTATTTGCTATGTCTTCTGGTTTGCCCATTCGTCTTGCCGGTATGGCGGCAATCATTTTTTCCTTTACTTTATCAGGAATGGTTTTGGTCATATCAGTGTCCAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTGTTAATCCTCTAAACGAGGTTTTTTTATTTCTAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 4 425882-425621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGHKQ010000003.1 Bacillus sp. 165 Scaffold2_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 425881 37 100.0 35 ..................................... TCTCGCTCGCGCCATGCGGAACCGGTGCTGTGTGC 425809 37 100.0 40 ..................................... TCGAACGTATATGTTGCATTAAATTTTGAATTGAGTTTCC 425732 37 100.0 38 ..................................... AGGTTAGCCTTCCGGTTTCCCAGCATGCTTCCACATAG 425657 37 86.5 0 ......................C...A...A..A.A. | ========== ====== ====== ====== ===================================== ======================================== ================== 4 37 96.6 38 GTAGAAATACAAAAACCTCGTTTAGAGGATTAACACA # Left flank : ATGACATTAGAGAAAATTTTACGTTCGATTGGGTTGGAACCGAAATAATAAGCTAGTGCAGTTTACGTATGACGGGAAGACGATGCATCGAAAATATGTGTGAGGGGGAGCTGTTAGGAGTCTAGCGGCTTCCCTTTTTCTGTGATAAGCAGAACTTGATAAGGTCATCTATATGAATATGTTACTTGTAGGTGGAGATGGCACATTCGTTCAAGAGCATGGATAGTAAATTTGGAAAAGAGGAAAAAAGTTGCATAAAGCTAAATAAATGACACGCTACAAAAAACAGGCAAAAACCCTAGACAGCGTGTCATTTTTATAATATAAGAGTATGTGGGATTAAATAAAGGATTAACTGTTATTATATGTATATTAAAATAATGAAATGATTTTCAAACCAGAGTTAGTTTACATAATATTTTTGCCCTGATTCAAAAATTGAAAGGGCGTGTATTTTGCCTCTTGAATCCCTTGGGAGAGTAAGGTAAAATGAAGGTACA # Right flank : CGCCCTCTCCGTACTTGGAAGAGGGCGTTTGTATGTTAACGCATGCGATAGTTCAATAAAATAGTAAAAAAGGCTGTCTAATAGTAAAAAGTTTCTACTATTGCATTACTACAATAAGAAAGAGAGTTATTATTTCCACTTCTGAATTATGAGTCAATACAGAATAGGGGAAAGAAATTCTTCAAACCATGCATTATTCCGTACTCAGCGTCTGATTTTTTAAGCCAGCTGCGAATAACGAACCATGAAAAGCTATGGTGGACAGAATGCGCGCCATTTCTTGGGGAGATTCTTTTCTGCCATCTAGCAGCCATTGCTGGATAACACCCAAATGTGCTGAAGAAATATACGAAGTCAGATATTCTTTTGGAACGAGTAAATTTTCCTGGTTAATGAATGAACCTTGCTCCTCTTCGAATAACGTTTTCCTCATGAAATCCTTTAGCTGTGTTTGAAAAGACAAGTCTCCTTTTGGACCTAATACAGCTTTCATGAATTGT # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATACAAAAACCTCGTTTAGAGGATTAACACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //