Array 1 165313-167918 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRL010000001.1 Streptococcus rubneri strain 1001713B170207_170306_C3 NODE_1_length_1006252_cov_52.084, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 165313 36 100.0 30 .................................... TGTTTGCGTGTAAATCGAGTAGCTAAATCT 165379 36 100.0 29 .................................... AGATGGTTATCCTTGCGATTATGACGAAG 165444 36 100.0 30 .................................... ATCGTGATTTGGCAGTTACAGCAGGTCGCC 165510 36 100.0 30 .................................... AGAATCCATCAGTATCTGTCCAACCGAATG 165576 36 100.0 30 .................................... ATCTTCCTCGACCCAATGGGAATAAGAAAG 165642 36 100.0 30 .................................... GTATCAAATCTGGTAAGAAACTTGAAGCAA 165708 36 100.0 30 .................................... GCCATCTTGATGAAGCCTCTCTTTCAACTC 165774 36 100.0 30 .................................... ACCAACTCTCAAGTTCAGCGTTTCCATATT 165840 36 100.0 30 .................................... ACTCTGTCAAATCTATTGACAGTCTAAATT 165906 36 100.0 29 .................................... CACCTTATGGCACTTCTACTAAATGGTAT 165971 36 100.0 30 .................................... ATCCTTGAAAGATTCCCGTCTTCGGCATCA 166037 36 100.0 30 .................................... TTTTTTCGCAGAAAAAACATGGTTCATTAT 166103 36 100.0 30 .................................... ATCGCAATCGTTGGAAGTACGACAAAGAGG 166169 36 100.0 30 .................................... TGCCTGATTATTTGCTAAATGCGCAAGGTA 166235 36 100.0 30 .................................... CTGACTATGATACAAAACGTGATGTGCTTG 166301 36 100.0 30 .................................... AATAAGGCTGTCAAATATCATTGGAGGTTA 166367 36 100.0 30 .................................... CTGCTCCACCACGTTTGTGACAGCTTCCTG 166433 36 100.0 30 .................................... AAAGTTACTTTGTACACAAGGTTTTAAACA 166499 36 100.0 30 .................................... TAGGAGCGAATTTAAAGTTCCGAAGTACCT 166565 36 100.0 30 .................................... TTGTTTCAAGTGGAGTCATTGACGAGGGAT 166631 36 100.0 30 .................................... TGTTTAACAAAATTAAGAAACTGTTCTCTA 166697 36 100.0 30 .................................... TTTAAAAGCTAAAACACGAAAAATCGTGTT 166763 36 100.0 30 .................................... CAGCTTCCCTTACTTTCTCGGCTGCCTGTT 166829 36 100.0 30 .................................... GTTTATGTCACAAAAAATGGCTGGATAGAA 166895 36 100.0 30 .................................... GCATTGATACAGAAGATGTTGATAAGGTTA 166961 36 100.0 30 .................................... AAGAAACTACTGAAGAAAAACCAAAGCGCA 167027 36 100.0 30 .................................... CTTGTCTCACACTTACAAAGTATTTGAAAG 167093 36 100.0 30 .................................... ATTGGGAAAAAAGAGCTTACAGGGCAAACG 167159 36 100.0 30 .................................... GAATAGCAAAGAAACGCGAAAAGAAGGCGC 167225 36 100.0 30 .................................... ATCTAGAAAATGACTCAAAAAATGGTTACT 167291 36 100.0 29 .................................... ATATTCACGATACTTTCAAGTTCCGAGTT 167356 36 100.0 30 .................................... ATGGCTTATCTTTGAACGGTAAGGGGAATG 167422 36 100.0 30 .................................... CGATCAACATTTCTCTTGATGTATTGATCG 167488 36 100.0 30 .................................... TTAAAGATTTTAAAGTACGACAAGAGTGGG 167554 36 100.0 30 .................................... AATCGCATGTGGCTGCGATGGATAATCCCA 167620 36 100.0 30 .................................... TGCACCATCAAGAGATAACTTCATGCACTC 167686 36 100.0 30 .................................... GAGCTCCTGGTATTCAAGGTCTACAAGGTC 167752 36 100.0 30 .................................... TCGTAGCGGTAAGCAAAGAAGATGTGCCAG 167818 36 100.0 29 .................................... CTAATCAAAAAATTAACACTAGAGCAGGA 167883 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.9 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TGGATGATTATTTATCCTATAAGGAATTCGTTGAGTGCTGTGAACACTTAGAGCGATTAACCAATCATAGTAGCATGTTATTCACTATTTCATTTCCTTCAAATGAAGGTTATCTTCATGTAACGAAAGAAGTACTAGAGGAGATTAACATTATTTCAGATTACGTTGAACATTTTTATTCTTTAGAATTTATGTATGAGCGATTTACCAATCAATATCCAATAAATCAAATACCTGATGAGCAAAATTTTTTATCCTCTATAAGAAAAATCGGACCTTATTTATTTAGTTCTGATATTCTCCATATGAGTTTATCAATTGAAGATCAAGTAGCATTGAGGATATTAAACGATTTATATCAGTATGAGGTGAAAATAGATTTCCATATTAAGCCAGTCAATACAATGTTATTAAAGTATTTAGAAGAATAGTATTGACGAGTTAGGTCTAAGACCTTATAATGGTTTTGAGCTACAAAAACCAAAATTGACGAATTTGAG # Right flank : TCAAATAGCAAAATGATTTTAATATATACTTCATAAACCAGCAGTCGCTATTTCCGTAGTCATTTATTGTTTTTTTAAGCTTTTATTGTTACAATATCCATATAGACAAAAAGACTGGTTTTCCAGCCTTTTTAATTGTTTTAAGAAAGGTTTTTTATGAAACGCAAATCGATTTTGTTTCTATTTTTATTCTTGCTCTCGATCGGTCTGGCCTATGAGACGCAGTCTATCACAGCTGGTTGGATGACAGGCAGTCAGTATGGAATCATTGGTATCTCTGTCCTCTTGCTCCTAGTATACGCGATTCCTGCTGTTTGGGCTCTCTTTCATTTTGCCAAGAAGTGGAAGTTGTCCTGGATTCCGGTTCTCTTTTCACTTCTAGGTGGGGGCTTTATCGCAGGTTGGTTGTCTAGTTTTGCCAATACCTATTTCCATGAGATGATTCAGGCAGTAGCGCCCAATAGCGACTTTTGGAATCAGTATGAGAGTGCCATCGCCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //