Array 1 6798-6403 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFN01000059.1 Pseudomonas otitidis strain 25_K NODE_59_length_38927_cov_28.347799, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6797 29 100.0 32 ............................. CCCTTGGCGTCGACTTTGTGGCTCAGCCTGAG 6736 29 100.0 32 ............................. GCCCTGGGCTGCGCTGCTGAGCTGGACCCGAG 6675 29 96.6 32 .C........................... CAAGGCCAGGTCGTGGTCACCTTCAAGCTCAA 6614 29 93.1 32 .C............G.............. TCTGCGGGTCTAGGCGGTCGTAGTCCGATTTA 6553 29 93.1 32 .C............G.............. ATGACACCGTCCAAACCGAGACACTGCAGCCG 6492 29 100.0 32 ............................. ACACCGCGTGTGCAGACCTGGCTGCGGACCTA 6431 29 86.2 0 ............T.A.......C.....C | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.6 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GAAGAGACCATCCTCCCGCGCCTGTACCGCGAAGCCCCGGTCAACTCCATCTGGGAAGGCTCCGGCAACGTCCAGTGCCTGGACGTCCTCCGTGCCCTGTCCAAGGAGCCCGGAGTGCTCGATGCCCTGTTCAGCGAACTGGGCGACGGCCACGGCGATGCCCGCCTCGCCGCGCAGATCAACAACCTCAAGGCCGCCTTCCACGACACCGCCGACATCCAGTACCGCGCCCGCCAGCTCACCGAAGACGTCGCCGTCGCCCTCCAGGCCAAGCTCCTGCTGGAGGCCGGCAACGCCACCGTCTCCGACGCCTTCATCGCCAGCCGCCTCGGCGGCAGTGGCCGGGTCTACGGCACCCTCCCGCGCGGCATCGACGTCGAAGCCCTGGTCGCCCGCAGCACCCCGCACCTGGCCTGACGCCACGCTGGCAACAGGGGAAAACAGCCGGTAGATTTTCCGCTGCCGGCTTTTCCCTCTGGGATCAGCGGGTTACGGGAAGA # Right flank : ACCCCAAACCGGAACGGCCAGGCCCCACTGCGCGGCCTGCGTAGGATGGGGTGAGCTTGGCGAACCCCATCACCCGGCCGCGCCCCGGCCCTAGGCCGCCCGCTCCGCCAGCCGGCGCTGGCCGGTCAGCGCCGTGGCCACGAACAGCGCTGCCGCCAGGCTCAGCGCCAGGGGCAGGCCGTTGGGGCCGGTGCCCATCAGCGCACCGCTCAGCAGCGGCCCCACCAGGCTGCCGATGCCCCACAACATGCCCACGCAGGCGTTGGCGGTGACCAGGTCCTGCCCGCTGAAGCGCTCGCCGATGCGCACCAGCGCCAGGGTGTAGACGCCCCCCGCCACCGCTCCCAGCAACACCAGCGCTGGCCACAGCAGCGTGGGCCGGGTGATCAGCCAGGGCAGCGCCATGCCGATGCCCAGCGCCGCCACCCCGCAGACCAGGTGCAGGCGGCTGCGCTCGGTGCGGTCCGACAGCCAGCCCAGCGGCACCTGGCAAACCATGT # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : GTTCCCCACGGGGGTGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3993-4875 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFN01000078.1 Pseudomonas otitidis strain 25_K NODE_78_length_27864_cov_27.381401, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3993 29 100.0 32 ............................. GTCATAGGATTCAGCAGCCAATAGCTCTTGAG 4054 29 100.0 32 ............................. CCGGCCTCGCGCTCAAAGTTGAGTTCGGGGTC 4115 29 100.0 32 ............................. TTAACAACCAGATTGCTACGTGCTGACTGAGT 4176 29 100.0 32 ............................. CCAGTCAGCTGGCGGCGGGCTTCCTCGAGCTT 4237 29 100.0 32 ............................. CCGCACACCCTGGCGGGTCCCCAACCCTCCCG 4298 29 100.0 32 ............................. ATGTGGATGAACTTGGGCCGCCCGTGGGCCGT 4359 29 100.0 32 ............................. CCGGTTGTTGAAATGGCTGTCCACGGCACGAC 4420 29 100.0 32 ............................. GCGGTCCTGGGTCAGACGATGACGACCGACAA 4481 29 100.0 32 ............................. TGGGCCAGCGTGCGCTTCCTGACGCAGATCGT 4542 29 100.0 32 ............................. AAACCCCGCCGAGGCGGGGCTATGGGAGTGCC 4603 29 93.1 32 ...........T..T.............. ACGAGTCACCCGGCGCCAGAGTTCTAGACCTG 4664 29 93.1 32 .........G....T.............. TCGGTCCATTTCTCGGCGCGCTCGCCGGAGAA 4725 29 96.6 32 ...........A................. GACGACGCCGCATGAACCGCACCGCCGAACTC 4786 29 86.2 32 ...........A....C........T..A GAAGAGCCAACCAGACTGCCGAAGGTCGAAGC 4847 29 79.3 0 C..........A.A...........G.GT | ========== ====== ====== ====== ============================= ================================ ================== 15 29 96.6 32 GTGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : GAGTCGCATCATCCCGCTGATCGAAGAGGTGCTCGCCGCCGGCGGCATCCACCCGCCCGAGGCGCCGCCGGAGTCCGTACCACCGGCCATCCCCAACCCCGACAGCCCCGGCGATGCCGGCCACCGGAGCCGCTGATGGCCTTTCTCACCGTGGTCACCGAGAACGTCCCGCCACGCCTGCGCGGGCGCCTGGCCATCTGGCTGCTGGAGGTGCGCGCGGGGGTGTACATCGGCGACGTCTCGCGGCGCACCCGGGAAATGATCTGGCAGCAGCTCGAAGCCGGGTACGAGGACGGCAGTGTGGTCATGGCCTGGGCCAGCCAGAACGAGTCCGGCTACGACTTCCAGACCCTCGGCAGCAACCGCCGCGAACCGGTGGACCATGACGGCCTGCGGCTGGTGGCCTTCCTGCCGCCGACTACCGCAGATTCCACACCCAAATAATCGGTAGATTTTCAGGAGGTGATTTTTATCTTTGAGAACAAGGGGTTGCAGTTGGT # Right flank : TCGCGACCCTACCGCCGCTGCCAGATCTTCCGGCCGCCCTGGTCCTCGGTCACCAGGTAGGGATCGCTGAAGCGGTAGCGGGTGGCGGGCTGGTAGTCGGTGCTGCCGTCGGGGCGGACCAGGAGGACGCCGTCGGCGCTCTGCCATTGGCCGGCGTACTGGAGGGTGCCGTCGCTGTCGTAGCTCCAGTCGGAGCCGCCGCCGACGGAGCGGCTCCATTGCTCGACGCGGCCGTCGGGGGCGAGGTGCAGGGTGAGCACGGTGTTGAAGGAGGCGAAGCTGGCGCCACCGCTGTTGATGATGTCTTCGTGGACCCAGGTGCCGACCAGTGCCGGGTCCAGGGTGCCGGCGCTGGTGCGGGCGGCGCCCGTGGCAGTTGAGGGGCTGCGCTGGAACAGTGCCTGGCGCTCCAGCACCTGGCCGCTGACCGGGTCGCGGGCGGCGAGGCGGGCGTTGAGCTGGTCATTGCCGTAGGTGGCGGCGAGGGTGGCGATCACCTG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //