Array 1 228434-228140 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMBX01000122.1 Streptomyces sp. ScaeMP-6W, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================== ================== 228433 28 57.1 90 .A.C.......C.....C.CCCCTGGG. CGGCGCCCTCGCCGCACCTCCCGTGCCGAAAGGGCGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT A [228422] 228314 28 100.0 34 ............................ CGGCAGGCCGCGAGATCCCCCTCCGCCTCGACAT Deletion [228253] 228252 28 100.0 57 ............................ CCAGCGGCGGGCCGCGAAGAAGGCCAGCCGCAGGTGCCGGAACTTGATCTCCCAGGG 228167 28 85.7 0 ....................C.A..G.T | ========== ====== ====== ====== ============================ ========================================================================================== ================== 4 28 85.7 61 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : TCCGTGTCCGGTCGGCACATGCTGCACGCCTGCACATCGAGGGGGGCCTGCCGGGCCTGCTCGGTGTCGAGCGGCCGGACGCGGGCCCCGGCGAGCGGCGGGCGCACCTCAGCGCCGCGCCGGGTCTCGGCCTCCCGCTGCTCGGCTGTCGCGATCGCCTTGTCGATCCGGGCCAGCCACATCGCGTGCCACATCCGCAGCACATGCAGGCACGGCAGGTCGGCGGGCAGATCGGACATGCGTTCGAGTCTAGGTATGTCGGGGCCGACGGCGTGCGGCCCCCCCCTGCTTGACTTCGAAACGCCGCCTTCCCTCCCCCATCAATCCTCCCGGCCTGGTACCGGGGCCGCATCGCCTGCATGGAAATCTCGCTCGCGACGGTCCTCGCCCTGGCACTGTGCGGCCGGCGGGCCCACTGGGTACTGGGCGCACGGCAGTTGCCCACCGAGGCACATGCGTGGGTATGGACCGAGAACGGCGCATTCGGGCTGTCCGGCCGC # Right flank : GCAACAGGGCTCTGGGTGGGTACGCAGTCAGACGTGCGGCTGGTCATCTGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTTAAGTGGGCAGGTGCGGTGGGCAGCGGCGGTCTCCGGGCTGCACGGGCTGCCGCACCGGTCGCAGACCCCGCGCACCTCCTGCGGGCAGCAGGGGCAGGTGCAGCGGTTTCGGACAGCGGGCACGCTGTAGCCACCGATGTACCAGTCGGTGTTGCCGCAGCAGAAGCCGCATGCGCCGATGCGGCACGGTGCGCACAGGCCGCTCACGACCGGGCCTCCGCGCAGGCAGGGCAGGCGCGCGGGAACCACGAAGCCCACGGGCACTGCGGGTCCGGGCGCACGCCGAGGTCCACGGCCGTGGCGGTATCGAGGCGCCCGGCGCACCACACGCACTCGGTGCCCCGGAGCTGCAGCTCAACGAGAGCGGTCGGCTGCGGTAACTCCTGCACTGTCGTCGCCATGGTCATCCCCTGCTGTCC # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.29, 5:0, 6:0.25, 7:-2.54, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [1,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 241000-241270 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMBX01000030.1 Streptomyces sp. ScaeMP-6W, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 241000 28 100.0 33 ............................ GCCCCGGCTGGGGGTGTAGACCACGGTGCCGCC 241061 28 100.0 33 ............................ GCCGTCGCCGACCTCGGCGGTCTGGGGCAGGGC 241122 28 92.9 33 ..........A.............C... GTACGTCATCTCAGCGAAGGCGGAGTACGCGTC 241183 28 92.9 33 A.......T................... GTCGATCTCGGACGCGTCGACCGCGAGGTCGAC 241244 27 89.3 0 .................-......GC.. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 95.0 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : CCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACGGGCTACCTGCTGAAAGCCGAACGCCCCGAGGAACTCTTCACGGCCATCCGGGCTGCGGCATCCGGGCGTACGGCGTTGTCGCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAACCCACAGCCGGAGCTGACGCCGAGGGAGCGCGACATTTTGCGGCACTTGACGCAGGGGTTGGGGAACCGGGAGATCGCCAGGGCGTTGTTCATCAGCGAGGCCACGGTGAAGACCCATTTGGGGCGGATTTATCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGAGGCGGTTGTTGGGGTGAGGGGGTGGGTGGCGGGGGTGGGTTCGTGGATTGGGGGGTGGGTGGCGTGGGTTGGGGGCGTAGGTTGGGAGTGAGAGGGAGGGGGCGGCGATGGGTAAAGGGATGACAAAGGCCGTCTGAAGATGCAGGTGGGGAAGG # Right flank : CCAGGCACCGATGCAAGGCCGGTGCGGCAGGCAGGTGATCCCCGCATGTGCAAGGACCGCCTGTTGCCGAACGAGTGACGTTCCCGGGTTGGCCGCTGATGCCCTGCCCCCACAAACCCGGCGGCCAAATGGCAGCGCGAGTACTAGCCACCGCCCCCGACGCCCCTCTCCACCTCCCCCAAAGCCTCCCCCCACCCAAACCCAGCCCCATCCCCCTGCTTAGGCAAATGCGGCTCCCCCTCGGTGAAAACCACCCGCACCCCCTGCCCCCGCAAGGTCTCCACCGCCCGCCCCACCGCAGGCTGCGCCCCCAGCGCCGTGGACCAGAACGGCGCCGCGACCACCGGCACACCGAGATGTACGGCCTCGGCCGGCACCCCCAACGCCACCGTGTCCGTGATCCCGGCCGCCCACTTGCACGCGGACGTGGTCGTGAGCGGCGCGACGAGCATCGCGTCCGCCTTGGGCAGCCCGCCGGACTGGCCGGGCAGGGTGTAACG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 64286-64133 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMBX01000088.1 Streptomyces sp. ScaeMP-6W, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 64285 24 100.0 41 ........................ TCTTGAACGGACGAGTCCGATCCGGACCTCGGCCCAAAATC 64220 24 100.0 40 ........................ TCTTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAATAT 64156 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCAGGGCCGCAGGGCATCCAGCGCCGCCGGAGCGGGCGGCGCACCCCCGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCACCACCGGCCACCGCAACGTCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACAACCCGGCCCCCCGCCGCCCCCTGGGTGACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATGGCGCCGGCATCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCCCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCACCCCACCGCGAAAAACAGCGGGCACGACCGCCGAGAGGCAGCTGGCCGACCGCCGAAAAA # Right flank : CCCCACCGCACCCCCTGCCGGGGAGGGAAACCTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAAAACCCGGCAAGCGGCTCCCGGGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCACGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCAAGGGACAGCAGACCCAGTACGCGCGCCTGCGCGCCGGTGAGTGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 14921-15248 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMBX01000085.1 Streptomyces sp. ScaeMP-6W, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 14921 36 100.0 36 .................................... CGTGACTGGCTCCGGTCGTCGGGCATCCCCACCACG 14993 36 100.0 34 .................................... CTCGACACCGTGATGCGCGACATCGACGGCATCC 15063 35 91.7 37 ........-.....G....................T GCATACGACAGGGCAGCCGCCAGGTGAAGCAGGCCGG T [15065] 15136 36 88.9 36 ............C......G.G......G....... ATCATCGATGAAACTGCTGGCTTCTTCACCGACGAC CGG [15151] 15213 36 91.7 0 ...................T.G..C........... | ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 94.5 36 TGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC # Left flank : GCCATGCCCGCCCACGCCGTCCTCGCCGCGTCGCCGCCCAGACCGGCGGCGCGACCGCTTCGTATGGCAAGGCCCTGTTCCAACTGGGCTTCCGCCACGTTGAGCGACGGGGGCAGCGGCTTGACACCTCTCGTGCGGGCCGGCGGTCTCCAGCAGTAGTCCCGCCCGGAACGCGGCGCCAAAGCAGCCGAACCCCGCAGGTGATCCACCAGCAGATGCCGCACAACCCACGGATTCCGGCTGTGCGCGAACAACTCACGACCCGACATCCCAGCCCCCTCACCGATCGACCACCCACCGAAGGCAGCCACCGTAGAGTGGACCACCGACACCACAACCCAGCCCGTCCCGAAGCGACCGGCCAGACCGCCTTCGGAACCTGAAGCACACACACGACACGCCAATCACACCCAAGGAAAATGCCAGATTTGCTCGCAATCGGGCCTCGCTTAACTGCTGGTCGAGAGCACGCAGACAGACAAACCCCTGGCCAACCAGGG # Right flank : CGCGACCAGCCCGGACTTACCGCGGACCTTGGCGAACTCTGCGACGAGTCCCCCCATGACTACGGAACAGCCGTTCTCCTGGATCGCGAAGGCCCCCGCCGAGACGGGGGCCTTGCATATACGCAGGTCAAGCGCCTATCACGAAGGTGAGTTCAAGGTGGGGCTCTTGGAATGCATCCGAATCGCCGGATGGCCGCCCACCTCACCTCCCTCCTGCCGGGCGTGCGGATCAACACCGAGCCCGAGCCCGGGCCCGACCGGGGCGCGTTCCTCATCGGCGGGGAGCGGTACCGGATGGAGCAGGGGGTGGGCGAGCACGTGCTGCTGGCGCGGCTGACGGGCGGCCAGGGCGGGCGCCCGGTCTTCCTGTTCTGCGGGCAGCGGCCGATCACGCCGCAGGCGGCGACCCGTTACCTGGCCCGGCACCACGAGAAGCTGGCGCGCAAGTACGGCACGGGCACCTTCGTCCTGCTGCTGAAGGTGGTCAACTCGGCGGCGTA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 116249-115611 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMBX01000115.1 Streptomyces sp. ScaeMP-6W, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 116248 29 100.0 32 ............................. CACACGATCCGGAGGCTCGGATGACCACCCAC 116187 29 100.0 32 ............................. TTGTTCGACTTGCTGGGCCACAACCAGCTGGG 116126 29 100.0 32 ............................. TGAGTGCCCGTGACGCCCTGAACGCCTACGTC 116065 29 100.0 32 ............................. CCCAACGCGGTTGCGACCTTCGCGTAGTCCTG 116004 29 100.0 32 ............................. TGTGGGAGGCCCACGAAGGGCGTCAGGTCATC 115943 29 100.0 32 ............................. TTCCAGCTGATCACGGTCAAGTGGTCGGTGTT 115882 29 100.0 32 ............................. CCCCGCGTACACCTGGCTCTTGCCACGTCCAG 115821 29 96.6 32 ..........................T.. GTCTCGGCGTCGAAGTGCTCGCCGGGGCCAGG 115760 29 100.0 32 ............................. GCGCGGTCGTCGTCCAGCGCCGAGGGGAGCGC 115699 28 93.1 32 ......A...............-...... ACGATCATCCACATGGCGACCCTGGTCCGACG 115639 29 69.0 0 ..C.......A.AAGT..T.A......G. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 96.2 32 GTGCGGCCCGGGCGCGCAGGGGGTGACCG # Left flank : GCGGCACGATGGACAAGCCGGGTCGCAGGGTGCGGCAGAAGGCCGGGCTCAACCGCGCGATCCTCGACGCCTCCATGGCCGAGGCCCGCCGGCAGATCACCTACAAGACTTCCTGGTACGGCTCCCGCCTCGCGGTCCTCGACCGCTGGTGGCCCTCCAGCAAGACCTGCTCGGCGTGCGGGTGGCAAAACCCAAGCCTCACGCTCGCCGACCGGGTATTCGAGTGCGCTCAGTGCGGACTCACCCTGGACCGCGACCTCAACGCGGCCCGCAATATCGAGCAGCACGCAGTACAGGTCGCCTCCGGTACGGGGGAGACCCAAAACGCCCGTGGAGAACCCGTCAGACTCCCCCGCCCCCGGGCGGAGAAGCAGGGCTCGACGAAGCGGGAAGACACCGGCCCTCCCGGGCCGGTGCCACCTCGGCGGAGCGATCCGCCGACACCCCCCAACCCGCGTCAAGGACAGGCAAAGCTGTTCTAACGCCGCAGGTCAGGAAGT # Right flank : CTGCGGCCTGGAAGTCCGGCCGGCCCGGCATCGACAACAATTCAAAACTGAACATTCACGCCGGATAGTCACCGAGCCAGCGACACAGAACACCAGAAGCACAAACCCCCCGCCCGCAGCAGTTCGGGGCAGGGGGTACGTGGGTTGAACAGTCAGGTGAGCGGGGCGTTTTTTGCTTCGGTTACGAAGTTCGCCCACGCCGCCGCCGGGAAGACGAAGGCCCCCCTGCTGCGGTCCTTGGAGTCGCCGACCGCGACGCTGCCCTCCGGCATCGCCTGGATCTCGATGCACTGCCCGTGAGTGTCGCCGCTGTACGTCGACTTTTTCCACGCTTCGACTGGAAGTTCGTGCCGCACCATCAGGAGAGCCTCCTAATCGCTCTCAGGGACCGTGAGTGTGACGCTCGATCAGGTCCACGGGTTCTCGCGAAGATAGAGCGATGGAGCGTCAGCGGTCAAAGGTGGAGCGGTACCGCTCGACATCGCTGTTCCTGAGGTGTG # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGGCCCGGGCGCGCAGGGGGTGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGGCCCGGGCGCGCAGGGGGTGACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //