Array 1 222636-228460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESWA010000022.1 Clostridium sp. YIM B02565 GCM70020046_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================================================== ================== 222636 29 75.9 36 G..A.A.C.......T...........TT GACTATGTTTTAACCGAATAGTCTTTCATACTCTTT 222701 29 96.6 37 ...............T............. GTTGAACATCTGCAATCCAACAAGATATATTAGTATT 222767 29 100.0 38 ............................. CTGTGTTGAAAGATGGTGCTGGCACTCTTGTTAAGGCT 222834 29 100.0 36 ............................. TTTTCTTTATCATGTGATCTGTATAATTTCATCTGA 222899 29 100.0 79 ............................. TAGTGATACATGGATAAAAACGTATGGCAGTTAAGATAAAACCAACAGGCTCAACAGTTTGGTACTCGAATTTAAGTTT 223007 29 100.0 37 ............................. CAGATATACAAGATATGAGCGTTGTAACAACAAGAAT 223073 29 100.0 37 ............................. TATGAATAACAGTTACCAAACCCCATTTTCTACAGTT 223139 29 93.1 36 ................A..........T. TGTACTGCCTAAGTTCCGCTTAAGTCTTTTATTAAA 223204 28 79.3 38 ...............C.-..GTT.....A ACTATAACTATAAAGTGACCCCCTCTTGTGAAGTGTCC A,A [223213,223217] 223272 29 93.1 37 ............C..T............. CTGGTAACACTATAACAGTTCCAACATGGGCTTACAT 223338 29 96.6 36 ..............A.............. TTTAGTAGTTAAATTTGCTTTAGTTGCTGCAGCAAT 223403 29 96.6 36 ..................A.......... ACTTTATGATCAAAGCATTAAATATGTGGGTACAAA 223468 28 93.1 36 ................-.........T.. GCAAAAGGAATATAACTGTAAATTTGTTGTGACACT 223532 29 96.6 36 ....T........................ TATTTCCTTTTCTTTTTCTGTATCCTTAAATGACAC 223597 29 86.2 37 T..........GC....C........... TCTTCTTTATTCATAGGCTATCCTCCTATTCCATATA 223663 29 100.0 36 ............................. CGGAAGCGACACTTGGTTAAGAACTTATGGTCAAAC 223728 29 93.1 35 ...............T.....A....... TTAGTAGCCTTAAGTCTATCCATTGTACTTTGCGC 223792 29 89.7 36 .....T......C.A.............. AGTTGCCCCTGAAGCTACAGCAGCTGACAATGTAGT 223857 29 100.0 37 ............................. ATAATAAAACACGTGAAGTTATAGAACAAAATTATAA 223923 29 96.6 36 ...............T............. CTTTTTTACTCATAATTCCTCCTAAATTAAAAGACT 223988 29 96.6 37 ............C................ TAGAAATTTTAGTATATAGCTGTCAAGCTGCAATAAA 224054 29 93.1 36 .C.......T................... TCATATCTTAGCTAACTACATCTCTAGACTGGGCAT 224119 29 82.8 34 ...............G.....A....CTT TCTTTTATTTCTTCATTTTTTTATTCTTAAATTC 224182 29 86.2 38 ....G.........CT............T GAACTAAAACTAAAGAAGTAGCAGAATGTTCCAACACA 224249 29 89.7 36 ........C..A.........T....... TAAGTTTCTTATCCCTAGTTTGTCATTGTCAGGCCT 224314 29 96.6 36 ...........................G. CCACTAACTCACTTCCTTTTTACCTTTAATTCCACC 224379 29 93.1 37 T..............G............. AAACTCCTCGCTCAAATTCGGCTGCTGAAAATATATT 224445 29 96.6 36 .....A....................... ATATGTGGTAACAAATAAATTTCCTTTTTGTATTCC 224510 29 96.6 31 ...........................G. TAGCGATACATGGATAAGAACATATGAGCAT 224570 29 82.8 37 .....A.......G.T...G.T....... ATACTTTTCTACTGATAGGTGTAGAAAACTTAATTTG 224636 29 96.6 36 .....T....................... TGTCTCTGTTACTGCTTGGCTCTTACCATGTTGTAG 224701 29 100.0 36 ............................. AGTGATTCCGGCTCTTACCATTTCATCCAGATTGAA 224766 29 100.0 37 ............................. CTAATGGAAAAATGATTGCACAAATCGGAGATAACGT 224832 29 96.6 36 ...........................T. TGTACCACCTAAGTTTCACTTAAGTCTTTTATTAAA 224897 29 86.2 36 ............C.AT..........G.. TCTTCATGTTTGCAATTGCTTGCAAGATTTATCGAT 224962 29 82.8 36 .........A.A...T.....A..C.... TAATCAAAGTAATACAGCTAGATATCAACAAGTTTC 225027 29 86.2 30 ...A.........GG.............T TGTATATGATGTTAATTGGGGTGCAAAGAT 225086 29 96.6 36 ...............G............. ATTATATGGTATTTATCCGTTAGTTAATTATAACAT 225151 29 86.2 36 C.C............G......G...... TGATTTTGATAATTTGCTTGATTTGATTATATGCTC 225216 29 86.2 36 ......T.....C.....C....C..... ATGGAATACATATGAAGGCTTTAGAAATGCAATAAT 225281 29 89.7 37 C..........C...............C. CTGGTCGCGGTGCTTTAAATCCTGTTTTTTTAACTTA 225347 29 86.2 37 ....G.........CT............T GAACTTAAACTAAAGAAGTAGCAGATGATCCAACCCA 225413 29 96.6 36 .........A................... ATATCTTTTTAAGTTTAGTAAATCTTCTAATGTATA 225478 29 96.6 37 .........A................... TCGGTGGAAACCAGGACGCAGTAGCAAACACTGTATT 225544 29 93.1 37 ............C..T............. CTGGTAACACTATAACAGTTCCAACATGTGCTTACAT 225610 29 93.1 37 .............T.......T....... TTAGATTTAAAGTCTTTGTCCAAGTACAATATTGGTA T [225621] 225677 29 86.2 33 ...........G.........A.....CT TTATTTTATTTCTTCATTTTTATTCTTATATGC 225739 29 86.2 36 ....GA........CT............. CAGACAATTGTATAATGAATTAATAAGAATCAGTAA 225804 29 96.6 36 .........A................... GCATTTATATGGTATTGATTTAATTGTTGGTCTTTA 225869 29 100.0 36 ............................. AATACAGAATAAAAAACAAAAAAAGCCAAGAAGAAT 225934 29 100.0 37 ............................. TTTGAAATTCTTCTACATTCTCCAACATGATAACCCT 226000 29 100.0 36 ............................. ACTTTCAGGTTGTTCTACTTCTGGAAAAGTTCTATA 226065 29 100.0 36 ............................. TCAGAGCGCCAGGCTCCAGCAGCTAAAAAGTTTAAG 226130 29 100.0 36 ............................. AACCCCGTCACCTATAGAGCGTAGTTTAGTATTCAT 226195 29 100.0 37 ............................. GTAGGCGTCATATATGTGTACCTCTTTTATTAAGTGC 226261 29 96.6 37 .....................T....... TTGCGTCGTATACTGCCTTACACTTAACGTCTCCATA 226327 29 100.0 37 ............................. ATAAAAGTGGATAGTTCAAAGAGTTCAAATCCTATTA 226393 29 100.0 36 ............................. ATAAATTTATAAGTAAGTTGCCTTCACCTATAAAAA 226458 29 100.0 37 ............................. TAGAACAGATGGGCGCAGCTGCTAACAGCCTACTAGA 226524 29 100.0 35 ............................. TAAGTAGTGTTGTAGGTGTCCTCCCTCTTCTACTA 226588 29 100.0 37 ............................. CTGCATCTGTTTTATTGTGTAATGTTGTGACTATAAC 226654 29 100.0 37 ............................. CAAAAGAAGGTGAAGTAAAATTGAAATATATAGCTAT 226720 29 100.0 37 ............................. AAAGAAAATACGTGGACTAGCCTGGATTGTTCTTAAA 226786 29 100.0 36 ............................. TGAAGTTATAGAACAGAATTACAAGGCGTTTTTCCT 226851 29 100.0 36 ............................. ATCTCTTTTAGAGTATCATTTAGAACAATGTTTTTT 226916 29 100.0 37 ............................. ACTCTTTTATTTCTACAGTGTCATGTATATCTATTCC 226982 29 100.0 36 ............................. AGAGAAGTTAACTCTAATAGAAGGATGGGCTAAAGA 227047 29 100.0 37 ............................. AGTCATTTCTTTTAGTAGCTGATATTATCACAACATT 227113 29 100.0 37 ............................. GTTCCCATGTGCTTCCATTCCACTTTTTTAATATATT 227179 29 100.0 36 ............................. TCTTATATAAGAAATAATATTGATACTTTTCGTGCT 227244 29 100.0 37 ............................. TAATCATTTATTTGAATTATTCAGACAAGGTATTCAA 227310 29 100.0 37 ............................. TGAATCCGCCGAAAGGCGACAACACCGTACACATAGA 227376 29 100.0 36 ............................. ATGTTCCCCTTTTGCTTGAACTTAGTGGAAATAGTG 227441 29 100.0 37 ............................. TATAAAAAGCACGTTTAATTTCTTCGGGTAACCTAAA 227507 29 100.0 37 ............................. CTGGTGATACAACAAATGTTTTCACTCCTTATCCTGG 227573 29 100.0 37 ............................. TTAGTACATAGTTAGTAATTAATATAATTTTTGTATA 227639 29 100.0 37 ............................. TTAATTTCATAGGTAGCGCAAAACAAGATACTCAACA 227705 29 100.0 37 ............................. TCGAGGGATATAACGGTATATATCAAATAAGTAGCTT 227771 29 100.0 37 ............................. CTGTACCTCTAACTATGAAATAACATTGCTTTTTAGC 227837 29 100.0 37 ............................. ATGATTCTACAAAATTGAATTTTAATATATTAGAAAA 227903 29 100.0 37 ............................. AAGGAACGTTTGATACTGCTACTAAAACATTTACTGA 227969 29 100.0 36 ............................. ATTTAATCCATTGAATAAAGAACTATCTCTTATTTC 228034 29 100.0 36 ............................. GCTATCAAAATTAGCATTTTCATTAATTATAATTTC 228099 29 100.0 37 ............................. TTATTGTATAAACAGTTGACTCTAATTCAGTTAAAAA 228165 29 100.0 36 ............................. TCAAATAAAAGCAGCATGGAACCAAGGACCAATGAA 228230 29 100.0 37 ............................. AAGTAGCTATCAGTGTAGATAGTTTTGATGATAATGA 228296 29 100.0 41 ............................. CTGCAATAAAGACTATTGTTAATAATAATAATGCGTAGCAT 228366 29 100.0 37 ............................. CACAATATTGATAATATTTATTATACAGTTTCTATTC 228432 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================================================================== ================== 89 29 95.9 37 ATTTACATTCCTTATAGTTAAGATAAAAC # Left flank : TTTGCTGGCATATGAATTAAAAACCCAGAATTAAGTCCTAATCCATTTTCTTTAAGTTTGTCATCAAGTCTAATTAATACATTAGCTGGGGCTCCTCCATGACTTGCAATTCCAAAAACATAAGTATCAATGCTAATCTTTAGTTTTTTAGCAACATTCTCTACTATTAGTGGCATACGTGCATAATATACTGGAAAAATTATTCCTATAGTCCTTGCTTTAACTTCTATCTCTTTTTCATTTAGAAGAGATCCTATATTTATCAAATTAAACTCTCCTAAATTACTAGAAATATCTTTAGCTATCTGCAAACTATTACCTGAACCAGAAAAATATAATATTGTATCCTTGGTAATTTCCATAAAGCTCTCCTCTTATTTAATACTATTAATATTTTTATGCTGGTTAGTATAAGTTAAGTATATATTTGATTTTTATATTGATTAATGTTTGTCCTATTACATATGCATAAACTATCTTTTTAAATAGTTACAATATCT # Right flank : CCCTAAAATCACATAACTCTCTCATGCCTTATTTTCTAAGGCTTACGCTACACTTTAAAAATACAAAAAATCATCTTTTTTGCAGTAAAGTGTAAGTAACGTTTTTTAGTTTATTACTAAATACTATTATAACATAGATTTCACAAGGCTTTGAATTAATCGTAAAAACATTGGGTTTACTGCAATTTATAAAAACATATCGTCGAAATTCTTTTCACTACCTATTACATATTTTTTAATATTCTTAGGATTACTTATTTTATAAATATATATCGAGTCTTCATTATCTACAGTAATTTTATTAATTTCAGCTAAACATTTATTTAGTTTTCCTTCTGTAATCTCTCCTTCAAATACTGAGTTTTGTGTCCATGTTATATATTTTTTAAGGAGTTTCCTAACCTTATTTACCCTAACTTCGTTAACATCATAAGTTATTATAACAAACATTTTACCACCATGCCTTTAAAGGTTTATATTTTTCATCTTCAATTAAATGT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCTTATAGTTAAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [60-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //