Array 1 2190867-2194555 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIGW01000001.1 Corynebacterium jeikeium strain NCTC11917, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2190867 29 100.0 32 ............................. GCCCTGGTGGAGTCTCGCGCGGTTGTGAAGCA 2190928 29 100.0 32 ............................. AAGCCGACGAGCCCCGACCACAATCCAGTCAC 2190989 29 96.6 32 ............................C AATTCGGTTTCGGGCTGGAGGAGTCCGCAGGT 2191050 29 96.6 32 ............................T GCCGACGAGGTTTTGTTGTGCGTCTTTGTTGT 2191111 29 100.0 32 ............................. TTGTAGGTTGTGCCATTCTTCCTCTGTGGGTG 2191172 29 100.0 32 ............................. CAGACCTGAGAACAGACTGACCAATCCACTCG 2191233 29 100.0 32 ............................. CGTCTCGCTCAAGATCGCCCGCGGATTCTGCA 2191294 29 100.0 32 ............................. TGCCGATCCCGTCCGGGCTGCAGGCTGCACTA 2191355 29 96.6 32 ............................A ACCTTGTTTTTGCAGGTTAAAGGGGGTGTGCC 2191416 29 96.6 32 ............................T CCACGCCCGGCACCCACCGGCCAAAACCGCCC 2191477 29 100.0 32 ............................. AAACTGTAGAGGCGGAGCCTGTAGAGGCAGAG 2191538 29 100.0 32 ............................. TCCGTTGTGAAGCTGACGGGGCTGATGTCCTA 2191599 29 100.0 32 ............................. GTCACCCCGCTCGAGGAGACAATCAAGGGTCT 2191660 29 100.0 32 ............................. GCAATGCCGCCCGAGGTCGCAGAGGCTGTTCT 2191721 29 100.0 32 ............................. CACCTGGCGGAGACGTTGGGTAAAGCAACGCG 2191782 29 100.0 32 ............................. TCACGCACAACCTTCAGAGTGCCGAACATGGT 2191843 29 100.0 32 ............................. AAGTATGAAGATCAGCAGAAAGACCTGTCTGA 2191904 29 100.0 32 ............................. TCGTCTTTCCAAGTCGCCCAAAGGTACGCCCG 2191965 29 100.0 32 ............................. CACCCAGCAGGCCTGCGGACTCCTCCAGACCG 2192026 29 100.0 32 ............................. CTTTCGGTAATTTCGTTAAGTGGATTTGGGAT 2192087 29 100.0 32 ............................. TCGCCCAAAGGTACACCCGGTGATCGGCTACG 2192148 29 96.6 32 ............................T CCGTAGTATTTCGGCGGCCTCGGGTATGGTGT 2192209 29 100.0 32 ............................. GGACATTCGCCAGACCTGGCTGATACTGTCCT 2192270 29 100.0 32 ............................. ACAGGCCAGCCATAGCATCAGACGCGAACTCC 2192331 29 100.0 32 ............................. GCTACTGACTGGCAGAACCCGGCAACCTATAA 2192392 29 96.6 32 ............................T GATTGGGATACCGCCTGGCATGCTGCGAACGA 2192453 29 100.0 32 ............................. CTCTCCCACGGTGGGGCTAGTCAGGTCTGTCA 2192514 29 100.0 32 ............................. GATGCGCCGGTGGTGTGCGAGATTCTGCCTGG 2192575 29 100.0 32 ............................. CCGATCTGGGATGCCATGTCTACGGCTGCGCT 2192636 29 100.0 32 ............................. CCTGGACCCGCCCGCTGCGCTATGCTGCGCGC 2192697 29 100.0 32 ............................. CTGATCGCAGGCAACGAGAACGTCAAGGAAGA 2192758 29 100.0 32 ............................. TAATAGCTCGCGGCCACGATGGCGAGATTAAA 2192819 29 100.0 32 ............................. GGCGATAAGATTCCCGCGTTGCTGTCTGACCG 2192880 29 100.0 32 ............................. CTGATCGGTGAAGCTTTCCAGGCTATGGGTAG 2192941 29 100.0 32 ............................. GCGCAGACTGCGGCGCAGACCGCGTTGAACCT 2193002 29 96.6 32 ............................C GACTCAACACCACCGGGGGAATTGCGGCGGCG 2193063 29 100.0 32 ............................. AGGAGCTTAGCAATGCAGAAGATTCTGCTTGA 2193124 29 96.6 32 ............................T TCCTCCGATAGTGACCAGCACACCTAGTGCGA 2193185 29 100.0 32 ............................. TTCCACTCTGCGTATCGGCGGGATCCGTCGAC 2193246 29 100.0 32 ............................. CGGATGAATCATCGGCGGTCGCCCGGCACGCC 2193307 29 100.0 32 ............................. ATTTCCGATGCTAACACTAAGGCGATTGAGAC 2193368 29 100.0 32 ............................. CCGAACTGCTGCAACGCTGGACCAGACTTCGA 2193429 29 100.0 32 ............................. TGCCCGTATCAATATCAACGTGGGCTGCATCC 2193490 29 100.0 32 ............................. CTTGCCGCTGCTGCGCAGACTGTTATGGCTGC 2193551 29 100.0 32 ............................. CCGAGGGAGAACCAAAACGGCGGGGGTGGGGT 2193612 29 96.6 32 ............................C GCGGCGTCGCGGCCACCCTTGGCGATGTGTTC 2193673 29 100.0 32 ............................. CCCGTTTAGCCCGAGAGCGCGCGAAGTACAGC 2193734 29 100.0 32 ............................. AATCTTCGAGCCGTTACCGCCGTTGATGGTGA 2193795 29 100.0 32 ............................. CCTTTTCACCAATCCAATCAAAAACGGGTGCG 2193856 29 96.6 32 ............................T CATCGGCGGTCGCCCGGCACGCTCTGGGTGAT 2193917 29 100.0 32 ............................. TGGTTCACTAGCTTGACATCTGTCACTAAGGC 2193978 29 100.0 32 ............................. GCTAAAAGCTTTAAGGAGTCCATCGGCAAGAT 2194039 29 100.0 32 ............................. TGACGACGAACGGGTTCGGAGACGAGATAGAA 2194100 29 100.0 32 ............................. GCTAAAAGCTTTAAGGAGTCCATCGGCAAGAT 2194161 29 100.0 32 ............................. TACCAGAAGGCTGTGGCTTCTGGGAATTCTGG 2194222 29 100.0 32 ............................. GAGGGTTCATGAATCAGACGCACAACGATGCT 2194283 29 100.0 32 ............................. GTGTTTGAGTGCGGCGGGGTGGCCAGTGTCAG 2194344 29 100.0 32 ............................. TTCGCGCTGTTCAGTGTCAGAGAGTGCCATGA 2194405 29 100.0 32 ............................. TCGATCCGGTTGCCGTTATGTAGGTTCACACA 2194466 29 100.0 32 ............................. TCCAGGTCCCAGTGGAAGAAGGCTTGTTCCTG 2194527 29 93.1 0 .......................T....T | ========== ====== ====== ====== ============================= ================================ ================== 61 29 99.3 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Left flank : TATTGATGCTGAGCTGGTGTTGTGGTCGGACTTGGAGGTCGTGGCTTCCAAACGCAATTGGTCAGACGATGGGCCAATCAGATGATGGTCTTGGTTGTATCTGCATGTCCTGCGGGTCTTCGCGGTGACCTCACAAGGTGGCTGTTGGAGATTTCTCCAGGTGTGTTCGTAGGGCGCCCCAGTGCCAGGGTGCGCGACCAGGTGTGGGAGCGAACATGCGACCTGGTGAATGATGGCCGAGCGATCATGGTGTTCCAGGCAGCAAACGAGCAGGGCTTTGATTTCAAGACTCACCGGCATAACTGGGTTCCAACTGATTTCGATGGGGTGAACTTGATTACGCGCCCCAACAACCGGGCAGCTTCGACGAGGCGGCGCGGATGGAGTAATGCGCGGAGGAGGTAAAGCGTCGGTGATCGTTCGCTAGTCCGGTAGGCGGTGGTGAAAACAAGCTGAAGTAGAATTGGCCCAACGGCTCAAAGAACCACAGCTCAGAGAGT # Right flank : TCAGGGAGTGCTATCTTGACGCGATTTCCACGGATCACCAGCATTCACCGCTCCTGAAAGGCGGGACGACCTCCAAAATGAAGAAAGCTTTCTATTCAATGCTTAACAGCAAAGAAATTCAATAGAAAGAAACGAAACTAAATTGAAAAGATCGTGGTTACTGATCTTCTGATACTCTCACATAATCAGGACGATGTTCCTTTAGGAAACTCCGTAAGCATTCGCCTGGGTTACTGCCAGGTGAAAAGAGATCGAGGATCTTATCCAACATGTCAGGCGCGATAAACACACCACCTTCGACCGAGTAGTAGACCGCATTCTCGAGTGCATATTCGAATTCTCCCCCTAAGGCGGGAGTAAAGGCGTGGTCAATCCCTGCAGTGACGAACTGCTCTCCATAACGGGAAAGAAATTCTTCGAATACATCCATCGAGGGATCCGCACGCATCTTACGATCCTCTCCGCTTTACCGCACGGTAGCTAAAAACGTGATTGTAACT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //