Array 1 20624-18612 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVY01000042.1 Acinetobacter ursingii strain TUM15496 sequence042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 20623 30 93.3 30 ............................CA AAATAGTCAAAGCTTAAACTTTGTCCGGAC 20563 30 93.3 30 ............................TG CTGCTGAAGAAGAAAACAGAAAATCAATTC 20503 30 93.3 30 ............................TG ACAGATTGTCAGGTTTAGCAAAAAAGAACC 20443 30 96.7 30 ............................G. AGATTATTCACAATCCATGCCCCCCTCTGT 20383 30 96.7 30 ............................T. GCAGATAGTTCACGCCTTTTGCGTGAATGT 20323 30 96.7 30 .............................A TGAAGTGACCACACTCATTCGCCAAGACGG 20263 30 93.3 31 ............................CA TATTTTTTTGCAGAATTTAACAGAAGTGAAC 20202 30 93.3 30 ............................TC TTTGATTAATTCGTCTCGTTCTTGGTCTAT 20142 30 100.0 30 .............................. TAACAGCATTATTAATATCATTTAGAAAGT 20082 30 100.0 30 .............................. CACCAGAAGTATTAGACGAATTTAAAATCG 20022 30 93.3 30 ............................TG TATGAATCCACAGTCCTTGATACACATAAA 19962 30 96.7 30 .............................C TTTCCGCCTGCTGCTGTTAGCGCTTTGGTC 19902 30 96.7 30 .............................G ACTTGAGATAAGCCATCCGTTAAACCACTC 19842 30 96.7 30 .............................C GATGTTGGTCGTATTCGTGGATTAATTTCA 19782 30 93.3 30 ............................TA AATTGGCTCTTTTCACCGCAATTTCAAATC 19722 30 93.3 30 ............................TA ATGTTGGTAACACTTTTAAAACATCATGTA 19662 30 93.3 30 ............................TG CTTATGATCCTGTTGCTGAAGAACAGAATA 19602 30 100.0 30 .............................. TTCTCCATCGATGAATGCCAAGTACAATGC 19542 30 96.7 30 ............................T. AATTTTGGGGTATTGCTACCCTATAAATCA 19482 30 96.7 30 .............................A AGCAGAGCCTTGTACACCAGATTGCACAAA 19422 30 93.3 31 ............................CC ATTGATGATGTCGTTTTGGATAAAAATCAGA 19361 30 96.7 30 .............................C ACAGGTGTTTTAAAAATTCATGCAGGTCCA 19301 30 100.0 30 .............................. TAGCTGAAAATGAAAATGAAGAAAAATCAA 19241 30 93.3 30 ............................TC CATCGCTTTAGATTTATCCACCGATGTTGC 19181 30 93.3 30 ............................GC CAGATCTATACCCAACGCCGCAGCAGCTTT 19121 30 96.7 30 ............................G. CTGAATGTGTCGCTTAATGTTTCTTAGTGT 19061 30 100.0 30 .............................. ATCTTCGATGTAATAGAGAAGCGCAACTTC 19001 30 93.3 30 ............................CG AACAGACTTGTCAACTTTATTTAGCTAGTA 18941 30 100.0 30 .............................. AAGTATTAATCATGGCTTCTGCTGACATTT 18881 30 93.3 30 ..........A.................T. TACGCTTGATGAGATCAATAGTTGGGTCAG 18821 30 93.3 30 ..........A..................G ACCCATTTAGCAGAGAAGAAATGAATACCC 18761 30 93.3 30 ..........A..................G TTACTCGGATGCTTCCCGTTCTAACGCATA 18701 30 93.3 30 ..........A.................T. GTACCTATTCACCAAATTACGTCAGACGAC 18641 30 90.0 0 ..........A.................TG | ========== ====== ====== ====== ============================== =============================== ================== 34 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGGTCAACGGATATGCTACTTATTTTAAAGTTAATCCAAAATTGACTGTTGAGCAGCGTGTTATTCATCAGGCAAAACGTCGTGGAATCTCAATTGAAGAAGCACAGCAACACTTTAAAGCATTGGATTTGACAGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAACTTCCGTTTGATTATTGGAAAAAAACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCCGATTTTTAACCCAATATTTTTCACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTGAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : CAAACGACGTGTAAGAGGTTAAGCTGATTAGTTCACTTGAGTAGAATATGGAATCTAACTGATCGTAAAAATGACTTAAAAAAGAAATAATGTAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAGTCAAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTTGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCACT # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 61624-60752 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVY01000016.1 Acinetobacter ursingii strain TUM15496 sequence016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 61623 28 100.0 32 ............................ CCTCGGAGGTGACAGGCGGTTTTTTTATGGAG 61563 28 100.0 32 ............................ GACTGGTCTACATTGAGTAATTTGGCTTTAAA 61503 28 100.0 32 ............................ TTTAAAATTAAACTGGATCTCGTCAGCATTCA 61443 28 100.0 32 ............................ ACTCAAATACTCCAAATCATCAATACCTGAGT 61383 28 100.0 32 ............................ CAAACAACGACACTCCTAACGTTCAAAACAAT 61323 28 100.0 32 ............................ GTTTACAAATGCCCTTGTTGAGGCGTTCTGGA 61263 28 100.0 32 ............................ AATCAACACAGATAATTTGCTTTTGCTCAACT 61203 28 92.9 32 ....T...............C....... TCGTGGCGCATCGACCAACTCTGGCGAATATG 61143 28 96.4 32 ..........A................. TTTAACAGCTATATGGCATGACGATTTAAAAA 61083 28 92.9 32 .T........A................. TTTAACAGCTATATGGCATGACGATTTAAAAA 61023 28 92.9 32 .T........A................. ATTTTGTCCATTGCCTTACGAATTTCGGCAAG 60963 28 92.9 32 .T........A................. AGAGAATTAAGAACGAGTGCTGAAGTGTATCA 60903 28 96.4 32 .T.......................... GCAACGAACAGTTAGAGAGCAAATGCTCACGG 60843 28 96.4 32 ...........................G ATTGGAAATGGACAAGTTTCAGAAGTGGCGCG GATA [60828] 60779 28 78.6 0 AT.................A....TTT. | ========== ====== ====== ====== ============================ ================================ ================== 15 28 96.0 32 GCTTCCTATCGCATAGATAGTTTAGAAA # Left flank : CTTAAAAATTCAGCTTTTTCGCTTGGTAAAAGTTTTGCATCCAAAATCTCGGCATCTGCGGCCCATTCTAGAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAACGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATGATTTAACTTGTTTTTAAAGCATAATATCAAATTATTAAATTAACTCATTGTTATTAAATGATTTATTAATAAGAGTTTATA # Right flank : TTTCCGTGATTCCAAGCATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTAAAATAAATTTGATGAACATTGGATTTTCTATAAATAAGTATTTGCCGATATCAACTCCAATTTTAAAACGCAAAACAGCAAATAGAAACCATTGAATAGACATGTTTCATAAGTCCCTGTCATTTTTGCCTATGGAAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATACAATGACAAATCCAGATATTCAAAAGGTAGAACTCGCAAAAGCCTATCGTTTACTTAATCATGGTCCAACTGTA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCTATCGCATAGATAGTTTAGAAA # Alternate repeat : TTCCTATCACATAGATAGTTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: R [matched GCTTCCTATCGCATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //