Array 1 91299-90503 **** Predicted by CRISPRDetect 2.4 *** >NZ_UASX01000019.1 Moraxella ovis strain NCTC11019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 91298 36 100.0 27 .................................... TTTAGTGTTAAATAGTTTTATTTGTTT 91235 36 100.0 29 .................................... CCACAAAACTACGGTACAGCAGGCGATGC 91170 36 100.0 26 .................................... TCATGGCTTTCTTTGGCACGATTGAT 91108 36 100.0 26 .................................... TCAGCACACCACATAACTGCATATGT 91046 36 100.0 26 .................................... TCCGTTGTAGTTTAATAATTTTTAAC 90984 36 100.0 28 .................................... TAATAGCCACAACTAACAAGCGTTATAA 90920 36 100.0 28 .................................... TTGTGATGGGATGTGTAGTAGGTGTTGG 90856 36 100.0 27 .................................... CGTGGATTCACGTCACGTCATATTTAT 90793 36 100.0 28 .................................... AAAACGGCTTACCACCCATTGAGTATAT 90729 36 100.0 28 .................................... ATAAGGTAGGCATATCATACCCCCACTT 90665 36 100.0 27 .................................... TTTATAATATATATAATATAATAATAA 90602 36 100.0 27 .................................... GTGTCTATTGATTTTAATTCCCAGACT 90539 36 88.9 0 ..............................T.TA.G | C [90506] ========== ====== ====== ====== ==================================== ============================= ================== 13 36 99.1 27 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TTCGTTTTGATGTTGCCAAGTTTTGACATGCAAGCAAATGGAGGAGATGTATGATAATCGTCAGTTATGATATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGATAGATTGCAATATTCGGTGTATGAAATCCAAAACAGCGAACGCATTTTAAATATCATCACCGAAAAAATAAAAGCAGAATTTGAGCCTTTATTTACAGGGGCGGACAGTGTCATTATCTTTCGATTTACAGAACGTGAAGTATTAAGGTTTGGCCATGCCAAACATCGCAATGAGGATTTGTTGATTTTATAAAAAGTCTTGGAAAAAATGATGAGGTTTGTTATAATAAGAGAGCTAAAGCACGCTCAAATATTTACTTTGCAAACCTCAGTCTTAATGCGTGATTTATCATGTTTTGTTGGTAAAAATGATTATTTTTTGTGCGAAAAACTTGCTAATCTCTCAAAAAATCATTAAAAATACCCCAAAACG # Right flank : GCATGAGAATTTAAATGGCTGCGAAGATCAAAAGGCATTATTTCATTAAAATCCCAAAATCACAGATTTATTTTTCTAGAACACTTGTATCTTACGAATTATGATTTATAATATTAACTTATACATATATTACTAGGATTTATAATCGTGAGTACTACGCTGCGCCAGTTGCGCGCTTTTGTGTTGGTAGCTGAGCAGAACAGCTTCACCAAGGCCGCTGAGACATTATGCCTGACGCAATCCGCCTTAAGCGGTCTGATCAAGGAGCTTGAGCAGAATTTAGACGTTAAGCTGTTCGACCGCACCACACGAAAATTGCACCTATCCGATGCGGGCATGCGCTTATTGCCGCAGGCGCGCCGTGTGCTCAATGAGATGTCCGTGCTTAATGAAAAGGTCTCCAACCTAAAGTCCTTGCACCAAGGACACATTCGTCTGGCGGTCTCGCAGCAGCTATCCGCATCGACGATGCCTAAGTTCATCGCTAAGTTCTGTGAGCT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 458475-459100 **** Predicted by CRISPRDetect 2.4 *** >NZ_UASX01000015.1 Moraxella ovis strain NCTC11019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 458475 32 100.0 34 ................................ GTTTTGTTGGAACAGCTAGACGAAAGGCTAGATG 458541 32 100.0 34 ................................ ACTTAAATTAACCCCATCTTTTTTGCGTACCCAT 458607 32 100.0 32 ................................ TATTTATTTATACTATATATATATAATAATAA 458671 32 100.0 35 ................................ TGCTATCCTGCCTCCCAACCCGCAAAACCCCTTAT 458738 32 100.0 35 ................................ TTGGCTAATGCTGTCATCTTGAGGGTAGGCATATA 458805 32 100.0 34 ................................ ATTTGCTCTAATTGCTTGGCGTTTTGCTTTGGAT 458871 32 100.0 34 ................................ AGAATTTGCATAAAGATGATAATAAGATAATCCC 458937 32 100.0 34 ................................ ACGAGTAACAACTTTAATATCAACGTTTTCTAGC 459003 32 96.9 34 ............A................... GTCGTCATCGGCACAAAAAATCAGCCAATTTTGT 459069 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.7 34 ATCGCACCCCATGCGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTAATGTTAATCAGTTATGATGTGGCGATGGATGACGGCGGGCAAAAGCGCCTAAGGCACATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTATTCGGTGTTTGAGTGCGACATCATGCCCGACCAATGGGTGGTATTAAAAGACAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATAAAAAAGAGGTAAATCGTGGCTCGCTAACGGGCAGTTCTCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAATAAAAACAAGTTCATTTATAATCAATGGCCTTTTTAAGGCTTAGGTTAGCGATTTTACCCATTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : CTCAATATCTTAATCTGATTCAAAAGTCCTATCGGGATTGGAATAGGCAAGGCAATAATTCACTTGATTTTTCTTCATCTTTTGTTTGATTTATTTTTCTATTTTACTGGATTATTTTCTAAGTTAATGCCTGTGCAATAAGAGGGGTTAAATCGTTGTATCTAAGTTTTTAATAATCACCATTATAAGAGCGGCAAACAAGTGATTTTATTTAGCTTAATTTAAGAAATGCTTTGTTGTTTTTTAAGTGTTTGCTTTAAGTTGATGGTCATATTGAAGTCGTATGCAAGGCATACTATAATGTGACCTCTTAAAACATATATTGATTGCAAGGTTAGATCATGATAAAAATCGGTCAAGGCATAGATGTTCACGCTTTTACGACAGGCGATTTTGTAACGCTTGGCGGTGTGCGTATTCCTCACACGCACGGCATTAAGGCTCACTCAGATGGTGATGTGTTGTTGCACGCTTTGGCGGATGCACTGCTCGGAGCGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATGCGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.70,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 717-1335 **** Predicted by CRISPRDetect 2.4 *** >NZ_UASX01000003.1 Moraxella ovis strain NCTC11019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================================================================= ================== 717 32 100.0 32 ................................ ACAAAATTGGCTGATTTTTTGCCGATGACGAC 781 32 96.9 97 ...................T............ GCTAGAAAACGTTGATATTAAAGTTGTTACTCGTGTTTCAACACGCACCGCATGGGGTGCGATGGGATTATCTTATTATCATCTTTATGCAAATTCT 910 32 100.0 34 ................................ ATCCAAAGCAAAACGCCAAGCAATTAGAGCAAAT 976 32 100.0 35 ................................ TATATGCCTACCCTCAAGATGACAGCATTAGCCAA 1043 32 100.0 34 ................................ ATAAGGGGTTTTGCGGGTTGGGAGGCAGGATAGC 1109 32 93.8 31 AG.............................. TTATTATTATATATATATAGTATAATAAATA 1172 32 100.0 34 ................................ ATGGGTACGCAAAAAAGATGGGGTTAATTTAAGT 1238 32 100.0 34 ................................ CATCTAGCCTTTCGTCTAGCTGTTCCAACAAAAC 1304 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================================================================================= ================== 9 32 99.0 42 GTTTCAACACACGCACCCGCATGGGGTGCGAT # Left flank : GCCAACGCTCCGAGCAGTGCATCCGCCAAAGCGTGCAACAACACATCACCATCTGAGTGAGCCTTAATGCCGTGCGTGTGAGGAATACGCACACCGCCAAGCGTTACAAAATCGCCTGTCGTAAAAGCGTGAACATCTATGCCTTGACCGATTTTTATCATGATCTAACCTTGCAATCAATATATGTTTTAAGAGGTCACATTATAGTATGCCTTGCATACGACTTCAATATGACCATCAACTTAAAGCAAACACTTAAAAAACAACAAAGCATTTCTTAAATTAAGCTAAAAAAAATCACTTGTTTGCCGCTCTTATAATGGTGATTATTAAAAACTTAGATACAACGATTTAACCCCTCTTATTGCACAGGCATTAACTTAGAAAATAATCCAGTAAAATAGAAAAATAAATCAAACAAAAGATGAAGAAAATCAAGTGAATTATTGCCTTGCCTATTCCAATCCCGATAGGACTTTTGAATCAGATTAAGATATTGA # Right flank : TAGCCTTTGTTTAAAGGCTATATCTTTAAGGCTTAGAATGGGTAAAATCGCTAACCTAAGCCTTAAAAAGGCCATTGATTATAAATGAACTTGTTTTTATTTTCAATTGTTAAATAATTCAAAAACTTAGCTCATCGCTAACCTGCCTGTATTTTGATGAGAACTGCCCGTTAGCGAGCCACGATTTACCTCTTTTTATCACAATATCAGCGTATCTTGAAACAAATCCACACTCTTTTTGCCCCATGATGTTCCACTTTGCCACGCCATTTACTGCCCAAATGATAAAACCGCAAACTGTCCTTGTCAGGGTCGTACGCCTTTAATAGCTTGTCTTTTAATACCACCCATTGGTCGGGCATGATGTCGCACTCAAACACCGAATACTGCACTCGCACGCCATAATCTTGGCAATGTTTGGCGATGTGCCTTAGGCGCTTTTGCCCGCCGTCATCCATCGCCACATCATAACTGATTAACATTAACATATCTCATCATCT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.69, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACACACGCACCCGCATGGGGTGCGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.60,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 3783-4408 **** Predicted by CRISPRDetect 2.4 *** >NZ_UASX01000003.1 Moraxella ovis strain NCTC11019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3783 32 100.0 34 ................................ GTTTTGTTGGAACAGCTAGACGAAAGGCTAGATG 3849 32 100.0 34 ................................ ACTTAAATTAACCCCATCTTTTTTGCGTACCCAT 3915 32 100.0 32 ................................ TATTTATTTATACTATATATATATAATAATAA 3979 32 100.0 35 ................................ TGCTATCCTGCCTCCCAACCCGCAAAACCCCTTAT 4046 32 100.0 35 ................................ TTGGCTAATGCTGTCATCTTGAGGGTAGGCATATA 4113 32 100.0 34 ................................ ATTTGCTCTAATTGCTTGGCGTTTTGCTTTGGAT 4179 32 100.0 34 ................................ AGAATTTGCATAAAGATGATAATAAGATAATCCC 4245 32 100.0 34 ................................ ACGAGTAACAACTTTAATATCAACGTTTTCTAGC 4311 32 96.9 34 ............A................... GTCGTCATCGGCACAAAAAATCAGCCAATTTTGT 4377 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.7 34 ATCGCACCCCATGCGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTAATGTTAATCAGTTATGATGTGGCGATGGATGACGGCGGGCAAAAGCGCCTAAGGCACATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTATTCGGTGTTTGAGTGCGACATCATGCCCGACCAATGGGTGGTATTAAAAGACAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATAAAAAAGAGGTAAATCGTGGCTCGCTAACGGGCAGTTCTCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAATAAAAACAAGTTCATTTATAATCAATGGCCTTTTTAAGGCTTAGGTTAGCGATTTTACCCATTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : CTCAATATCTTAATCTGATTCAAAAGTCCTATCGGGATTGGAATAGGCAAGGCAATAATTCACTTGATTTTTCTTCATCTTTTGTTTGATTTATTTTTCTATTTTACTGGATTATTTTCTAAGTTAATGCCTGTGCAATAAGAGGGGTTAAATCGTTGTATCTAAGTTTTTAATAATCACCATTATAAGAGCGGCAAACAAGTGATTTTATTTAGCTTAATTTAAGAAATGCTTTGTTGTTTTTTAAGTGTTTGCTTTAAGTTGATGGTCATATTGAAGTCGTATGCAAGGCATACTATAATGTGACCTCTTAAAACATATATTGATTGCAAGGTTAGATCATGATAAAAATCGGTCAAGGCATAGATGTTCACGCTTTTACGACAGGCGATTTTGTAACGCTTGGCGGTGTGCGTATTCCTCACACGCACGGCATTAAGGCTCACTCAGATGGTGATGTGTTGTTGCACGCTTTGGCGGATGCACTGCTCGGAGCGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATGCGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.70,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //