Array 1 318933-317184 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYBR01000001.1 Streptococcus mutans strain UAB-29 NODE_1_length_640325_cov_21.0666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 318932 36 100.0 30 .................................... TCGTCGCCGGGTCTGCTTTCCCGCCGAACA 318866 36 100.0 30 .................................... CTCAGCTTATCTCGCCATGTGGACTAATTG 318800 36 100.0 30 .................................... TTTCCAAATTCCCTCAAAGACACGCCTGCG 318734 36 100.0 30 .................................... AAAATGACGCTAATACAAACAACATCCAGT 318668 36 100.0 30 .................................... GAAAGGAATAAACTTTATCACTCAGCAAGA 318602 36 100.0 30 .................................... TAACATCTCCTTAATCACAAATTCAATTCT 318536 36 100.0 30 .................................... GAATATCACTTTTGCTATTTTGAGTCGTGC 318470 36 100.0 30 .................................... AAGTTAGATGATAAATAACGTTGTACTAGT 318404 36 100.0 30 .................................... AGTTTAGTCCGCCGTTTAGAAGCAGAAGGC 318338 36 100.0 30 .................................... ACAAATTCTTAGAGTTGAAAGAAATCGAAG 318272 36 100.0 30 .................................... TTCAGCTTACCTTGCTATGTGGACCAATTG 318206 36 100.0 30 .................................... CTATGCTAACGGAGGAATAGTATCGCAAGA 318140 36 100.0 30 .................................... AGCAATCATGGCTAAACCGTTGACATATAA 318074 36 100.0 30 .................................... TTTTATCAAAATGAACAAAGTTAGATCCAT 318008 36 100.0 30 .................................... TAATAAATTACTTAACAAGGTCAATGTTGA 317942 36 100.0 30 .................................... AATCAACTAGCTTACGCTTGTGCTCCACCT 317876 36 100.0 30 .................................... TCAAAGGGTTTAAACAACAAATCAGGACTT 317810 36 100.0 30 .................................... TACTGTTTTTGAAGAGTTTGGCTGTTCCTT 317744 36 100.0 29 .................................... AAAGTATGTTAAACGCGCTACAGAGCCAT 317679 36 100.0 28 .................................... GCCAAAAAGCGCAACACTGCGCGGAGGC 317615 36 100.0 30 .................................... TCTAGATGTTGATTTTAAGCCGAGCGGATA 317549 36 100.0 30 .................................... AGATATTGTTGTTAAAGGCGGGGCATTTAA 317483 36 100.0 30 .................................... AAAATGCAGAATTCAAAAAAGCTATGAATT 317417 36 100.0 30 .................................... ATTTTATTTGTCAAACATATGATTATACTC 317351 36 100.0 30 .................................... CTGCGCTCAAAGCTTTAGGCGACTGGGTTT 317285 36 100.0 30 .................................... TACTCATGCTTCATTCTCGCTTTCAAACCG 317219 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATAAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : AATAGAATCAAATTCTCCTAAGTCAGTTAAGTTTTAGAGCCATGTTAGTTACTGATTTACTAAAATGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //