Array 1 36096-37258 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWX01000020.1 Asaccharospora irregularis DSM 2635, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 36096 29 100.0 38 ............................. TAAACATTCACTTGTAACTATTAAAGTATTAGAAGATA 36163 29 100.0 37 ............................. CTTGAATATCAAGGAGAAGGAGTTGGAATAGCGCCAA 36229 29 100.0 38 ............................. TCTACATACTTAGTGAAATCATTCGGATTAATATACTC 36296 29 100.0 37 ............................. CGTTTAGTTTATCGGTACTAGGCTTAACTCCATAGAA 36362 29 100.0 38 ............................. TAGCATGGTCGCTTAATTTTTCATCAAGGGGTGTTTTG 36429 29 100.0 39 ............................. CACACACTCAACGTATATTTATATTTCCCATCACTTTGT 36497 29 100.0 39 ............................. CCGACAGTTTACAATTAAAAGTTGTTCAGTCGGCAAGAA 36565 29 100.0 40 ............................. GAATATCAGATACGCAGCAATACAAAATGGCTGGAAACAG 36634 29 100.0 36 ............................. TCACCTGCTTCTTTTGTCCAGTACTCTAACAAACTT 36699 29 100.0 38 ............................. ATGCTTGTAGTTCTTTTCACCAACCTTATCTATAAAGT 36766 29 100.0 37 ............................. CAAGTTCGTGATTTAATTCAAGATAAGGGAATAGATT 36832 29 100.0 38 ............................. TCAAATTTAATAGGTATTAGGAGGTATTTATAGATGAG 36899 29 100.0 38 ............................. ATTTCATAGAACATATAACGTTCTAAAAATTTCTTTTC 36966 29 100.0 37 ............................. TAGCTTCGAGTTGCCCAGCTTTATCACCTTTATAGTT 37032 29 100.0 37 ............................. GTTAAATATATGTTCAACCAGTTCGTCAGCTTCTTCT 37098 29 100.0 37 ............................. ACCAAAGTATCTAAAGTGTTTTCTAAAGTACGCATTG 37164 29 100.0 37 ............................. TTTAAAACAATAATAGTACAGGGGAAATAAAACAACA 37230 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 18 29 100.0 38 GTTTTATATTAACTATGTGGTATTTAAAG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [8.3-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 22973-23602 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWX01000033.1 Asaccharospora irregularis DSM 2635, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 22973 29 100.0 37 ............................. ATACATACTTGACTAATATAATTGATGAGGTCAAACC 23039 29 100.0 37 ............................. CTCTGAGATTAAGAGAATATTTATCAAATCGCAAAGG 23105 29 100.0 39 ............................. AGGGGGTATAGTTGTGAGTAGATTCGCTAAAGCTAGAAA 23173 29 100.0 40 ............................. GGAGCTACATAATAATCTGTTAATATCGTATCTTCTAAAA 23242 29 100.0 37 ............................. TGTAGTTACTCCCTGTACTTGTTTTTTCCCCTGTACT 23308 29 100.0 37 ............................. ATTAAATTGTAACGTTTTTTCAGTTTATGACTACGAC 23374 29 100.0 37 ............................. CTTTTATATTTTTTATTACTTCTTTGTAATTGTATTC 23440 29 100.0 38 ............................. ATCAAAAGGATTCCACCAATTTAACTTATACATAAAAC 23507 29 100.0 38 ............................. TTAAGCCTTCATCAACAAGCCACTTCGCTAAATCTATT 23574 29 79.3 0 .....................GGA..GGT | ========== ====== ====== ====== ============================= ======================================== ================== 10 29 97.9 38 GTTTTATATTAACTAAGTGGTTTGTAAAG # Left flank : TTATATTAACTAAGTGGTTTGTAAAGAAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTTATAAGACTTCAATATATTTAA # Right flank : TACACTTAATTATACAATAAAAATTCGGACATGATATAATAGATAAAAGGAAATTGGAGGTCTATCATGTCTAAAAGATATAATTATGAGTTTAAAAAGCAAATAGTAACTTTAGTTAATAATGGTAAAAGCCCTAATGAAATAGTAAAAGAATATAAGGTGGCTAGATCTACTGTGAATAAGTGGGTTAGCGACTATAATGGCTCAGGTTCGTTTAAGGCTAAAGATAATAGAACTGAAGAAGAAGATGAATTAATAAAACTTAGAAAAGAAAATCAACAATTAAAAATGGAAAATGATATTTTAAAGCAAGCGGCGCTGATAATGGGACGAAA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTTTGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 187599-186975 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWX01000003.1 Asaccharospora irregularis DSM 2635, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 187598 29 100.0 37 ............................. CCATTTAGTTGTTCCCTATACTTGTTGTTTTGTTTCC 187532 29 100.0 38 ............................. TCATTTATATATTTTATATTCAATTAGTAAATCCTTTA 187465 29 100.0 36 ............................. TTTGTTAATAAAAGCTTTTGGTCTAGTCTTACAGTA 187400 29 100.0 36 ............................. TTTACTAGCTAAAATAACAAGTACAGGGCAAGAAGA 187335 29 100.0 38 ............................. GAGGACTTAACGGAAGAAGAAAAGAATAGATTTCAATA 187268 29 100.0 40 ............................. AGATGATAACACAAAACATAAACTAGATTTAATTAAAAAG 187199 29 100.0 37 ............................. TTTATTTTGCCAAGTTCGGGCAACAAAAAACAAATAA 187133 29 100.0 35 ............................. CAGGGACTGCAACAGGTCTGGGTTGCTCACTAATG 187069 29 100.0 36 ............................. TACAACTGATTACTGGTAGTCAGTCGTAAGATAACA 187004 29 89.7 0 ...................A...AA.... | T [186977] ========== ====== ====== ====== ============================= ======================================== ================== 10 29 99.0 37 GTTTTATATTAACTATGTGGTATTTAAAG # Left flank : TATTG # Right flank : AACTTGGCCATATATCAAAATGATGTTTTCAGGAAAGATATGTAATTGATTAAATAATGGGTTAAACATAAATAAGTACTATATAAAATTAAAAGAAAACTATGGTAGCTGAGATAACTTTTAAAAAATGAAGAAATGTGTATACCCCACAAAATAGGATATACACATTTTTATTATCTAGAATTATATATTTTTTCAATTATATTAACAATAGCATACATTAGCCATGCACAAACCGCAAGAACAAATACACCCATCATAACTAGGTCAAGTCTAAAAACCTGGCTACCGTAAACTATCAAATATCCGATTCCGTTTCTTGAAACTAAAAATTCCCCTACAATAACACCGACCCATGCCATACCTATATTAATCTTAGTAAGATTTATAAGATTTGCAATATTTGCTGGTAAAATAAGTTTAAACAATACTTGAGACTTAGTAGCTCCAAAGCTTCTAAGCATCTTCACTTTTTCTTCATCTACACTTATAAAGTAGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //