Array 1 44406-42258 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRDT01000020.1 Rhodopseudomonas pentothenatexigens strain JA575 Ga0074894_120, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 44405 36 100.0 30 .................................... GAAGCGCTCGGTTTCGTGAAGACGGCTGTA 44339 36 100.0 30 .................................... CATCGACTACAACGCCGGCACCTACATCTA 44273 36 100.0 30 .................................... GAATGTCGCTTGCTCCCTGATTGTGTTGTC 44207 36 97.2 30 ....................T............... AATATACCAACATTCCGCGTCGAAAGCATC 44141 36 100.0 30 .................................... TCATAGACTGATTTATCGACGCCGCGTCGC 44075 36 100.0 30 .................................... GCCGGATTTCTTCAAGCTGGCGCCCGGCGC 44009 36 100.0 30 .................................... TGATGTCATCGCCGCACCTCGTCCGTGGCA 43943 36 100.0 30 .................................... TTGAAACCGGAAGAATACAAAACTGGTGAT 43877 36 100.0 30 .................................... GGTGAAGGCGGACGGCGAGACCTGGGTGTG 43811 36 100.0 30 .................................... AGCGGGGAGGGGCGGGAGATGGCGGACAAG 43745 36 100.0 30 .................................... CACGTAGTCACGACCATCATTCGCCATCGG 43679 36 100.0 30 .................................... AGGCCTTGATACGACGTCTCGCCCGACGAG 43613 36 100.0 30 .................................... GGCAATGATCCGGGCGTCGGTGTCGAGCAG 43547 36 100.0 30 .................................... AATTTCGACGCCGGTCACCTTGCCGCCGAC 43481 36 100.0 30 .................................... GTGGCGCCGTGTCGCCTTCCCTGATCTTCG 43415 36 100.0 30 .................................... TGCGGCCGGCGCCGTAGCGTCGGGCTCGAT 43349 36 100.0 30 .................................... CCGCGGCGGCCATGGCCGCGGCGCGCGGAT 43283 36 100.0 30 .................................... CACGGTGGCGTCGGCGCCGCTGCGGCCGAG 43217 36 100.0 30 .................................... AGAAGCGGGCCGAGCGCGGCGCGGTCCGTG 43151 36 100.0 30 .................................... TCACGCAACGTCACGGTGCGCTTATCCAGG 43085 36 100.0 30 .................................... CATCGTGTCGGCCTTGATGCCGAAGCCGTC 43019 36 100.0 30 .................................... AAAAAGCAGCCGACGCAAACCTGAGGATGC 42953 36 100.0 30 .................................... GCGAGCCGAAAGCTCGACCATCCAGCCGCG 42887 36 100.0 30 .................................... GTATTGCGGTCGAACAGGATCGGCTGCGGA 42821 36 100.0 30 .................................... GGCGAGCGCGGACGGATTGGCGCGCAGCAC 42755 36 100.0 29 .................................... GACCGCCTCGATGCATGGGCGCTGATCGG 42690 36 100.0 30 .................................... AGCGCGGTGAGGCACAGCGGCTTCGGAAAC 42624 36 100.0 30 .................................... TCCGCAGGGCTCGGCGGAATTCGCCGCGTG 42558 36 100.0 30 .................................... AAGGCGATGGCCGAGGCGCAGAAGGCACTG 42492 36 100.0 30 .................................... CTTCTTGGCGGCCAGCACCGCGTCGAAGTA 42426 36 100.0 30 .................................... GAATCAAGTATGGAATCCTTCTGCATTCCC 42360 36 100.0 30 .................................... GCAGAGCTTCCGCACGAATTCGAGCATTTG 42294 36 94.4 0 ................................G.T. | G [42265] ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.7 30 AGTTTAGCGGACTGGTGATTGAGGGCCAACCGAAAC # Left flank : TGCCAAGGCTTGCGCCGGCGAGACGGATCGCCTGATCCTGCCGAAACCCGGCCTGCCGCTCGGCTTTTGAAATGGCGACCGCCGAACACCAGGCGCCGCCCGCGCTGTCAGGTTATCGAATCATGTGGCTGTTGGTGCTGTTCGATCTTCCGGTGGGGACCAAGAAGCAGCGCAAGAGCGCGACCGGATTTCGCACAAAGCTGCTCGATCTCGGCTTCGAAATGTCTCAGTTTTCTGTTTATCTGCGCTTCTGCGCCGGCAAGGAGCAGGCTGAAGCCTATGCCCGAAAGGTCGAGCAGGCGATGCCGTCGTCCGGGAAGATCCACATCATCGGCATCACCGACAAGCAATATGAGAACATCCGAACCTATCGCGGAAGAAATCGCGAACAGAGCCCGAAAAATCCGGATCAATACGCGCTCTTCTAGCCCGTCAGGTGCGATTCGGGACCTCGTCGATCAGAAATTCTCCAGTATTTGCAAGCGGATGGTTCGGTAGGC # Right flank : GTAGCCGCGCCCGACGTCCTTTTCGGTTGAACCGTGCTCGGGTTCTGACCGACTATGGCGCAGGCGGCCGCGATCCGGCCGCTGCGTTTTGAGGGACTGGAATGCGACCGATCGAAAGGCCCTGCACGCGGCACGGAGCTGTATTGTTCGCGGCTGTCGCCTGCATGCTGGCGCTGCTGGTCGCCGGTCCGGCATGGGCTGCGAAGCGCGTCGCGCTGGTGATCGGGAACGATGATTATCGCAACGTGCCGAGGCTGCAGAAGGCGGTCAACGACGCGCGCACGATCGGCGATGCGCTGAAGAGGCTCGGCTTCCAGGTGATGGTGGCGGAGAACCAGACCCGCGCCGCCTTCAGCCAGAGCCTGCTGGCTTTCGACACCACGATCGAGCCCGGCGACACCGCGTTCTTCTTCTATGCCGGCCATGGCTTCGAAATCGCCGGACAGAACTACCTGCTGCCGACCGACGTGCCGGCCGCCACCGAGGGCCAGGAGGAACTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGCGGACTGGTGATTGAGGGCCAACCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //