Array 1 2415322-2416449 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2415322 30 100.0 31 .............................. TCCGCAAGAAGAACTCCAACGCCCCGACCAC 2415383 30 100.0 31 .............................. GCTTCTCCCTGTCGGGTGCGGGCCATCCGGC 2415444 30 96.7 31 .............................G AAGGGTGACCGGGCCTACATGTCCGGGGTCG 2415505 30 100.0 31 .............................. CAGCCTTCCGGCCGGTCCTTCTTGCGCGGGA 2415566 30 100.0 31 .............................. GCTTCTCCCTGTCGGGTGCGGGCCATCCGGC 2415627 30 96.7 31 ............................T. GCGGACGCCAGCGCCCCCACCCCCAGGGCGG 2415688 30 96.7 31 .............................A TCGACGCCGGCGTCCACCAGCCCGGGCAGGT 2415749 30 100.0 31 .............................. CGCCGGGATCAGAGCGGGCGCGGCGACCCAG 2415810 30 100.0 31 .............................. GGGTCTTGCTGCGCACGAGGTCGAGGACCGT 2415871 30 96.7 31 .............................A TCGACGCCGGCGTCCACCAGCCCGGGCAGGT 2415932 30 100.0 31 .............................. CGCCGGGATCAGAGCGGGCGCGGCGACCCAG 2415993 30 100.0 31 .............................. GGGTCTTGCTGCGCACGAGGTCGAGGACCGT 2416054 30 100.0 31 .............................. TCGGGAAGTGGGGCGAGAACGCTGCCGCGGA 2416115 30 100.0 31 .............................. ACGTCCAGACCAACAAGGGCGTCGTGATCTC 2416176 30 96.7 31 .............................G ACGACGGGGTCGCTGCTGCTGGCCAGGGTGG 2416237 30 93.3 31 ............................GA TCCTCCTGCCGCCGCCCTGGGACGCGATGAG 2416298 30 96.7 31 .............................T CTTCTCGGGTCATTGCACTTTCTCCTGTTCT 2416359 30 96.7 31 .............................A GGACGGAGCGCGGGTGCGCCTGGTGTGCGGG 2416420 30 96.7 0 .........................C.... | ========== ====== ====== ====== ============================== =============================== ================== 19 30 98.3 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : CGAGCCCGACCGGGTCGAGGACGTGGAGGCCTACCTGCGGGACTACGCGCGCCGCCAGCTCACGGTGGTGCTCACGCCGCGGTTGATGCGGTTGAGGCGGATGGTGATCGGTGAGGTCGCGCGGTTCCCGGAGCTGGCGCGGGTGCTGTACGAGTGCGGGCCGCAGAGGGCGATCGCCGGGCTCGCTGAGAGCTTCGCCCGGTTGGGGGAGAGGGGGCTGCTGGCGGTGGGGGACCCCCTGCGGGCGGCGTCCCACTTCAACTGGCTGGTGATGTCGGAGCCGGTGAACCGGGCGATGCTGCTGGGGGACGAGGCCATTCCGGCGGAGGCGGAATTGTGCCAGCATGCGGAGGAGGGAGTGCGGGTGTTCCTCGCGGCGTATGGGGTTGACGGTCGTTAGGGGAGTTGTGGGGCGTTTGGGTTTTATGGGGCCGGTGTCTGTTTTTCGGGAAGTTGGAAAAACAGGCGCTTGCCACTGGTAAGTTCGCAGGTGGTTGACT # Right flank : CGATCGCACCAGCGGCAGCTACCTCCTTCGTCACCCCAGGCCCGGCACACCCGCTCACATCCGGTCAGACGAAGTACCGGGCCTGGAGGCGGAACAGTTCGGCGTAGAGCCCGTCGGCCCGGCTCAGCGTGTCGTGGGTGCCGGTCTCCACGACCCGGCCGCCGTCCAGGACCACGATGAGATCAGCCGCCCGGGCGGTCGTGAGGCGGTGCGTGACAAGGACGGTCACGCCGCCCTCCTGGCGGCTCAGGTCGGCGTACTGCTGGAACAGCCGCTCCTCAGCCCGTGCGTCGAGGCTGGCGGTGGGCTCGTCCAGGATCCGCAGCAGCGGCGCCCGCCGCATCGCCGCACGGGCGTTGGCGACCGTCTGCCACTGGCCGCCGGACAGTCCCTCGCCGTCCCACGACTTCCGTCCGAGCCGGGTGTCCAGGCCCTCGGGCAGCGAGGCGAGGAGCCCGTCCCCGCCGGCCGTCCGCAGCGCCTCGATGACCCGCTCAGGG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2421730-2422613 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2421730 30 100.0 31 .............................. AGTCCAACAACGTCACGGACGCCCCGTACTT 2421791 30 100.0 31 .............................. AGTCCAACAACGTCACGGACGCCCCGTACTT 2421852 30 96.7 31 .............................G CCATCAACGCCGCCGCCCGCTCCGGTGGTAT 2421913 30 96.7 31 .............................A AGAAGTTGCGCGGGCGCTGGTCCGGACTGGT 2421974 30 100.0 31 .............................. GGCCGTGCTGGCCGATCATCCGCCGGATGGC 2422035 30 96.7 31 ............................T. ACCACCCGAGACCGCTTGGCCATCGGGACCG 2422096 30 96.7 31 ............................G. GGGTCCGAGGTCGGCGGGCGGGCGGTCCTCG 2422157 30 93.3 31 ..................A..........G GCACGGCACCCTGGACCGCCGCTGCGTCATC 2422218 30 96.7 31 .............................G GGAAGCCCACCGGCACCGTCCGCAAGGTCGC 2422279 30 96.7 31 .............................T CGATCACCGTCTTCTGGACGCGGTCCGGGTC 2422340 30 96.7 31 .............................T CGACAGCGTTCTTGGAGAACCTGATCAGTCC 2422401 30 96.7 31 .............................G CACCGGTCACCCCGACGGTGCCACCGGTGAC 2422462 30 96.7 31 .............................A CCACCACGGGCCAGTCGTGGGCGTTCGGTGA 2422523 30 100.0 31 .............................. ACGCGGTGCGCCAGGCCGGGGAGGGGGTGGT 2422584 30 96.7 0 ........................A..... | ========== ====== ====== ====== ============================== =============================== ================== 15 30 97.4 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : TCGGCCACACGCCGTCCGAGGAGTTCGCCCATATGACCGAGAAGCAGCGCAGGGCCATGTTCCTCGCCGAAGAGCTCCTGCCCGGTCTGCCGGACGACTTCGAGGCCCTCGTGGTGGAACAGCGGCCCCGGAAGCTGACCCGTGAGGGAACCGCCGTGGACGCCCACGACTCCACGCTGTTCGCCCGCCGTCGACGCTGAGAGCGACCGGCACGAGGCGTCTTGATGGGGGCCGACGGTCCCGGGAGCACCTTTGACGGGGCGTTTTCGGGACCTGTTGTCTGCGGGAGCTTCGGGACCGCGGTATCCCCTTCTGTTGGTTGGTGATGTCGGAACCGATGAGCCGGGTTATGTTGCTGTGGGACAAGGTGGTCTCGGGGCGTGTGGCCTGGTGGCGATTGAGGGGTTTTGTTGCTTATGGGGTTTTGGTGGTGCATGTCTGTTTTTCAGGAAGTTGGAAATTCGACTGCTTGCCATTGGTAAGTTCGCAGGTCGTTGACT # Right flank : CGAGCGCGAACGGGCCATGGTCAGGTGATGGCGTCGATCGGTAACAGGAACGCTTGTTCCCGGGTTCGAGCAACACCATCAGCCTTCTCGTCACCGAAATGTCGATGAGGTTCAGCAACGGCGCCACGGGCGAGAGTGTTGGCGGCTTCGGAGTCGAAGGCCGACGAGGGCCGTCTCAAGGCTGAGGGGCGTCGCGGCACTCGGCTTCGCCGGTCGGGCCCGCAGGTGTGACGCCGATCAGCGACGCACCATCCGGACCAGGGCGGCGGTGTCGTGTCGGCGGAACCAGGCCGCGACACAGACCAGGACCAGGGTGACCGCCGGGATGGCGACCAGGTCCGGGGTCACGATGGCGCTCAGGGCCGTCGCGCCGATCATCAGCGGGATCTGGCAGAGCAAGGCGAGGCCGCACAGCCGGGGAACGAGCAGCGCGATCGCCCCGGCGAGCTCCAGCCAGCCGACGACGACCATGCCGGGGATGCCGAGCCCGATCAGCTCGA # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2429557-2430441 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 2429557 30 100.0 31 .............................. GAGAAACCGCTCATGAACTGGAGAAACACAT 2429618 30 96.7 31 .............................C GGGGCCGTGGTGTTGGACGCCGCGGATGTGG 2429679 30 96.7 31 .............................C GCGACCGCCTGCCTGGGGGCGTTGTAGACCC 2429740 30 100.0 31 .............................. CGTCGGCCTTGACCATCATCTGCACCCCGCG 2429801 30 96.7 32 .............................C CGCCGATCCACATGGAGGCCTCGTCGTGGCGG 2429863 30 96.7 31 .............................C GGCCGCCGGGCCGCCGCGGTGGCCAGCTCCT 2429924 30 96.7 31 .............................G AGGCGGCGCGCGCGGACCCGTCGTCGCTGTC 2429985 30 96.7 31 .............................A TCCCGCGTGGCGCTGCCCTCTACCTGCGCGG 2430046 30 100.0 31 .............................. ACTGGCGAACCTGCTGGAGGACCTGTCCGAC 2430107 30 100.0 31 .............................. GCGCGGCCGCCGCCTTGTTTGCCCACGTCCC 2430168 30 100.0 31 .............................. ACTGGCGAACCTGCTGGAGGACCTGTCCGAC 2430229 30 100.0 31 .............................. GCGCGGCCGCCGCCTTGTTTGCCCACGTCCC 2430290 30 96.7 31 .............................G GCAGTGGTGAGGGGCTCGCCCTTCAGGCCAA 2430351 30 96.7 31 .............................C CTCCGTCCGTAGGTGGCCAACCACAGGAGCA 2430412 30 90.0 0 ...............A.......A.G.... | ========== ====== ====== ====== ============================== ================================ ================== 15 30 97.6 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCT # Left flank : CAGGATCAGTGACGCATCCTATCCCTGTGCCCCGGCCTTCCAGCGACCTGCTGCACCGACCGCTTCCGCCGCTGCCTCGTCGTCGCCCGCTGGTCGGCCCGTTCTGCCCGGCCTGCGAGCACCCTTCGTGCCGTCGGCGTCGGGCCGCGCGCCTGCCCCGCCTGGGCGGCCACCGCTCTGAGTTCACTCGCGAGCACGCCCGGGCCGCAGTTCTCCAGCGGCATCACCCGCACCTGCTCATCTGGTTCGGTGAGCAGACTCTGTCCTACTGGGTGGCCTCGCCTGTCGGACTGACTGAGGTTTCCGAATCCGAGGTGCTGTTGCTCCTCGCGGAGCCGGTTTCCGTGAACTGAGGGGTTACCGGCAGGGGCGTGATGCGCTCCTGCCGGTATTCTGCGGACATGGTCTTCCCAGGGCTGAGTGCGTCGTCCGTTTTGTCTGCTTCTGAAGAAGTTGGAAAAACGGCTGCTTGCCACTGGTAAGTTCGCAGGTCGTTGACT # Right flank : TGGGAGTACGGCTGATGCCCTCCCAAGGCCTTCAGGGACAGGAGTCGTAATCCACGGACGCGCTTCCGGCTGCGGCGTCGTAGCACTGGCTGACCGGCGGTATCCCGGAGACACCCGGCACGAAGTCGGGGTCTCCGAAGGTGAGCGGGCCCCGCTCGGGAGCACCCGGGAAGGTGAGGACGAGCCTGTCGCCGACCGAGACCGGTCCGGGGGCCTCCTCCGGCTCGATCGGGCCCTCAGGAGTGGGCACCGTGAACAGCTCAGGCACGGAGGCGCTGTGGCCCTCGACCAGGTTCCCGACGAGCACGGTGAAGCGCACCCCCTCGGGGACCTCCTCCACGGAGCTCACGGAGAGGTGGAAGAGCGTCTCGTACGAGTCAGGGGTGGCCTGGAAGGTCGGCATGCCGTTCGGCGAGGTGATCACCTCCGCCAGCCATTCGGCGTTGGTGCCGAAGGGCGTCGGTTCCGGCATCACCCATTCCGTGTCGGGTCCCTCCGTA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2483137-2483838 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2483137 30 100.0 31 .............................. CGCCGCCGATGCCGATGGCGGGGAACTGCTG 2483198 30 96.7 31 .............................G TCGAGATGGACCCGGAGAACCTGACCGGTTT 2483259 30 100.0 31 .............................. CGGCGAGCACCTCGGCGCCGCTGGTGGCCGC 2483320 30 100.0 31 .............................. CGGCGAGCACCTCGGCGCCGCTGGTGGCCGC 2483381 30 96.7 31 .............................A GCCAGGAGTCGTAGGACTTCTCCGCCACCGA 2483442 30 96.7 31 .............................G ACCTGAGATCACCCCGATCGAACTGCCTCCG 2483503 30 100.0 31 .............................. TACGTGTACAGCGTGAACGGCATGACCGGGC 2483564 30 96.7 31 .............................T CACCGGTGGCCGACCCTTCCTGCACGCCATC 2483625 30 100.0 31 .............................. AGGCGGGCATGCGCAACAGGGCGGGCCGGGT 2483686 30 100.0 31 .............................. GACTGCCCTCTACCGACTGTTCGACGCTGAC 2483747 30 100.0 31 .............................. CCACCGCGAGCCCCCGTATGCGAAGGCTCGC 2483808 30 93.3 0 .........................G...G | G [2483831] ========== ====== ====== ====== ============================== =============================== ================== 12 30 98.3 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : CCCGCCGCGCCAGCAGCGCGGTGGTCAGCCCGACGATGCCGCCTCCCACCACCGCGACGTCGACCTCCACGTCCTGGCTCAGACGGGGAAACTCCGGTCGGTTCTCCACGACCGTCCACACGCTCCTGTGCTGCATCCTCTGCCCCTCCCGATCAGGTCCAGACGCCGTCGGCCCCCGTGCGACGGACAGCGCCTACACCAGCTACCCAGCGTTCCCGGTCGCTACCGCCGGAGCCTCGGGTCGGGGCATGGACCCGCGCCGCTTCCAGAGCCGGGGGAGGGGTGCGTGGCGAACACGGGCTGGGCGAAAGGAGAGTGGTGGTGTGCGGTGGTTCCCCGGCAGAGGGGGATAGCGGTCTGTAGGTTGGGTCTTCTGGAGCTACAGCGTTTTGGTGGTTGGTGAGTTTTTGGTTCTCTTGGGGCCTGTGGTGCGTGTGTCTGTTTCTGAAGAAGTTGGAAATTCGGCTGCTTGCCGCTGGTAAGTTCGCAGGTCATTGACT # Right flank : GATCCCCACTGACTTCCGCGTTCGTCGTCCCCGGAAAACCGCTCGACGGCTTCGGGGCGACCTGACACAGTGGCGCACCATGACGGGTTCCGAACTTGTGACCGCCGCGGACGTGCGGCTCATGCAGGGGCTGGCGCAGCGCGTCACCGCGATCCGCCCCGACCTGGTGAACAGCGACGCCTCGTTCGGCGAGCTGGCCTGGAACTGGGGCCGGGGGCACGCCAGCGACGGCGCGACCTGGCCGCGTCGGCTGTGGTTCTCCGGCGGGGAACTGGTCGCGTGGGGCTGGCTCCGCCTTCCGCGCCGGGTGAGGCTGAGCGACGGCTCGGTCAGGGACGTCACCGGCGCCTACCTGATGCACCAGGTCCACCCCGACCACGCCGGGCTGGTCGACGAGGTGATCGCCTGGTACGACGCCACGGCGGCGGGCCTCGAACGCACGGTGCTGCCCAGCGCCGCCGACGGGTTCGCCCTGGAACGGTGGGCGGCGCACGGCTACG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 2835985-2836318 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2835985 29 100.0 32 ............................. GCATCTGATGACCGCACCGGTGTCAGGGTTGC 2836046 29 100.0 32 ............................. GGCTGGCAGAAGGCGTAGAGGACGCTGTTGCC 2836107 29 100.0 32 ............................. ATCAGCCCAGAGGACCACGACCTCGTCCTCCA 2836168 29 96.6 32 ........................G.... GACACCTGATGAAGCGCGTCTACCTCGACTGT 2836229 29 96.6 32 ........................G.... GCCGACCCGATGGAGACGGCTCTACGGCTGCT 2836290 29 86.2 0 ..............G.........GG..T | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 GTGAGCCCCGCGCACGCGGGGATGAACCG # Left flank : GAACAGGGCTGAGGCCCTTCCGGGGTGAGCCCGGACGGATCGTGTGGATGGGTGTTGGGCAGGCGTGGGCGTACGTGTGGCCGGACGGCACCGCCACCGGCGGCGGTGATCGCGCCTTGGGTGAGGAGTTGGGGCACGCCTATCGGATGCTGCGGGGCGCCGGGTTCCCGGGTCTGGAGAGCTTTGACCTGGAAGCCGTCGCTGGTCAGGATTCCTGCCGGGTGGGGTGTGCGGCCCTGGAGCAGCACTGGGATCACTCCGTATCGCCCTGACTTTCTCGTCTTGCTCATCCTGCTCGTAGTGCTCTTCAGGGCTGTTTCTCCGGGCCGGGGGCCTGCGACCGCAGCCCAGGCATGGAAAGCCTGTGTGCCCGGCGCGGTAGTGGGGATGAGCGCCGCCGTGCACTGTGTGAGGATGTACGTCGAAGCCGGGAGTGCTCAGCATGTCCAGGGCCAAGGTTGCGGCGAGATAACGGCCCGCGTTGCCGCAGGTCGTTAAGC # Right flank : TGTCTTGGGAAACTCCCGCCTGGTGGGGCGCGGTCTCGGTACGCTCACCGGGATGGTGACACTGAGACGCAAGGGGCCTGTGGTGCGGGAGATCGAGACGAAGTACCGGGTGGCCGATCTCGAAGCGCTGCTGGCCGCGCTCAAACAGGCCGGGGTGCGCATGAGCGACCCCGTCTACCAGGACGACCAGGCCTACGCCCCCGCTGGCTGGCGGCCGGAGCTGGGCCAGGTCGGCCACACCTTCGCCCGCGTGCGCACCCAGGACAGCGTGCACCTGCTCACCACCAAGACCCCGCTGGCCAACGCCATGGAGTGCGTGGAGTACGAGACCATCGTCGCCGACCGCGAGCAGATGCACGGGGCCCTGCTGGCGCTGGGCTACGAACCCACGGTGCGCATCGTCAAGCACCGTCGCACCGGCACCACAGGGCCCATCGGGGTGTGCGTGGACCTGGTCGAGGGCCTGGGCGTCTTCGTCGAACTGGAACTGGTGGTCGATG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCGCGCACGCGGGGATGAACCG # Alternate repeat : GTGAGCCCCGCGCACGCGGGGATGGACCGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGATCCCCGCGCCAGCGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5901562-5897752 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5901561 29 100.0 32 ............................. CAGGTGCCTGCCCGGTTGAGCAGCCACGTGTA 5901500 29 100.0 32 ............................. GCGGCGGCGATGCGTTCGACCTCTACCGCGGG 5901439 29 100.0 32 ............................. CGCTGGTGCTGGCCGACTCTCCCGTCGTGGTC 5901378 29 100.0 32 ............................. GCGAGGAAGAGCAAGCTCCGCAGCTGCACTAC 5901317 29 96.6 32 ............................T GCGTGGCGTCTTGCCAGCTATCGACCATTCCA 5901256 29 100.0 32 ............................. CGGAACTCATCCGGTACGCGCTGGCGGCGGTC 5901195 29 100.0 32 ............................. CGCATGGGGGTGCGGCTGGCCGGTCAGATCAC 5901134 29 100.0 32 ............................. GTGAGCTGCTGGAGGTTGTTGCCCATGTTCTT 5901073 29 100.0 32 ............................. CTCTCGCCCAGGTGCGGGGGGAGGTGTCGGGT 5901012 29 100.0 32 ............................. CTCTCGCCCAGGTGCGGGGGGAGGTGTCGGGT 5900951 29 100.0 32 ............................. AGAGGCCTCCTGCTGCCGGTCGGCCCGACTAC 5900890 29 100.0 32 ............................. CCGTCGTGGCTCCGGGCGAAGTGCGAGGGCCG 5900829 29 96.6 32 ............................C CGCCCCGGGATGACGGTGTCGACTCCGGTCTC 5900768 29 100.0 32 ............................. GCCGCGACCGCAGCCCCCGCCTCCGACCAGGC 5900707 29 100.0 32 ............................. GGCACGTACATCCCCGTGCGAGGCCCCGCTGA 5900646 29 100.0 32 ............................. GACACGAACGCGCCCGTCGTTGTGAACGGTGG 5900585 29 100.0 32 ............................. AGGCCGGTGTGAGCATCCGCGAGGTGACCCGA 5900524 29 100.0 32 ............................. AGCAGGGACGGGTCGCTCAGCAGCAGCGGGAG 5900463 29 100.0 32 ............................. GCTTCGGCGGCCTCGGTGAAGCGCCGCAGCAT 5900402 29 100.0 32 ............................. CCGCCCACGCCACCACCTGACCCGACCACCAG 5900341 29 100.0 32 ............................. ACCACCCATGCCCCTGCTTCCCGTCGTCCTGC 5900280 29 100.0 32 ............................. CCCACGTCCTCGACCTCCTACGCCACCGCCGA 5900219 29 100.0 32 ............................. CACTGGCGCAGCGACCCCCAGCAGCGGATCAG 5900158 29 100.0 32 ............................. GGCATCTCCCACGCGGTCGACCCCATCACGCC 5900097 29 100.0 32 ............................. CCCTTCCGGTCCCCGTGCCGGACGAGGACGAC 5900036 29 100.0 32 ............................. GCGAGCTGGCCGAGCGCGAGGAGCACGCGGCG 5899975 29 100.0 32 ............................. CACAACCTGACCAGGGGCGACGGCAAATCCTG 5899914 29 100.0 32 ............................. TACGCGCTGACCAGCACGTCAGCGGTGACCCC 5899853 29 100.0 31 ............................. GCACCCGCCGCCCTGCGGCAGTACCCCCTAG 5899793 29 100.0 32 ............................. GGGACCAGTGTCCAGGTGACGGAGAGCTTGTA 5899732 29 100.0 32 ............................. GGGGTCAGGTTGCCCTTGACCTTGGCCGACTT 5899671 29 100.0 32 ............................. GAGCACCACGCCGCGCCGCTCCCGCGCCGCGC 5899610 29 100.0 32 ............................. ACTTTCCCCCCGTTGGCCCTACTGCTGTCTCT 5899549 29 100.0 32 ............................. TCCACGTCGGGGCGCATGCTGCTTCGGGTGGT 5899488 29 100.0 32 ............................. TCCACGAATTCCTCATAGGACCCTTCGGGGAT 5899427 29 100.0 32 ............................. GACCAGGGCGCGCACCTGAACGCCTGACCCCC 5899366 29 100.0 32 ............................. CGCCAGGTGAGGGCCGCACAGCGGGCGCTGGA 5899305 29 100.0 32 ............................. CCGAGCATGAGCCGCACCCCGTTGCCGAACTC 5899244 29 100.0 32 ............................. GAGCTGGCGACGGCGGTGGTCAAGCGCGGCCC 5899183 29 100.0 32 ............................. GCCCAGGCCAAACTGCCACCGGGGGAGATCGG 5899122 29 100.0 32 ............................. GAGAGCAGCGTGACCTCGACCTCGACCGTGAC 5899061 29 100.0 32 ............................. GTCGAGGACGTCCCAGCCCAGCAGGAGCCGTC 5899000 29 100.0 32 ............................. TACCTGCGCGACGAGCGCGCCCGCGAGCGGGA 5898939 29 100.0 32 ............................. ACGACCATGTCGCCGCGGATCACGAAGCGGGT 5898878 29 100.0 32 ............................. CGGAAAGCGGGCGGCCACGGCCCGACGCTGGC 5898817 29 100.0 32 ............................. CCCGCGATGAACGCCAGCGGGCTGAGGTCCAG 5898756 29 100.0 32 ............................. GCAGGTGGGGGGTGTCGGTGACGCCGGTGACG 5898695 29 100.0 32 ............................. CCTGGCCTCCGCCGGATCAACCAGGCGTGGGT 5898634 29 100.0 32 ............................. ATCGCGAAGACCGCGCTCATCGTCGGCGTTAC 5898573 29 100.0 32 ............................. CCCTCCAGGCCCGCACCGACGGGGACCTGGTG 5898512 29 100.0 32 ............................. GGCTCCCGATCGTGGAGTTCCCGCAGTCCCCG 5898451 29 100.0 32 ............................. GAGGAGATCCGGCGGCGGGGCGGTAAGAGCCC 5898390 29 100.0 32 ............................. ACGGATGGGACCCCGGCGCCGCCTCCGGCCTG 5898329 29 100.0 33 ............................. GGGTCCGCGCCATTCCCGGAGGTGCCCCCGGTG 5898267 29 100.0 32 ............................. GCGCACACGTAGACGGACTCGCTGGTGGCGGA 5898206 29 100.0 32 ............................. CACGTCGGATCGTGCCCGTCCCGCCTGTACGT 5898145 29 100.0 32 ............................. GCTCCTACTACGGCTACAACGTCGGCCTCGAC 5898084 29 100.0 32 ............................. GCTCCTACTACGGCTACAACGTCGGCCTCGAC 5898023 29 100.0 32 ............................. AACTCCGTAGCACAAGGGTCCTACGAAAATAT 5897962 29 100.0 31 ............................. CTCGACGTCCCGGTGGAGGAGCTGTACTCCA 5897902 29 100.0 32 ............................. GACGACGCGGCCGGAGCACTCGGCGCGGCCGG 5897841 29 100.0 32 ............................. GAGATGGAGGACGCGCAGAAGACCGCTGAGCA 5897780 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 63 29 99.9 32 GTGAGCCCCGCGCACGCGGGGATGGACCG # Left flank : GAGGGCGGCCGCGGAGTGGGCGCTCGGGCAGGTCGGCAAGCCGTATGTGTGGGGCGGTGTGGGGCCCGACGGCTTCGACTGCTCGGGGCTGACCATGATGGCCTGGAGAGCCGCTGGGGTGTCGATCCCGCGGGTGACCACCGATCAGGTGAACATCGGGACCCGGGTTTCGCTGGACGCTCTGGTACCGGGGGACCTGCTCTTCTACGACACCGGGAGCGGGCCCGCGCCCTCACACGTGACCATGTACGTCGGCGACGGCCAGATGGTCAACGCTCCTCGTACGGGTACGACCATCCGGGTGGAGCCGGTGGAGGGGCCGTACTACTCCGCTCGCTTCATGTCCGCTGTTCGCCCCGGTTGAGGAGCTTGAACGGACGCTGGAGCGGATCCGTGGCTCCTGTTGTGTGAGGATGGGCGTATGCGGGTCACGAGGGTGGCTGGCATGCTCCAGAGAAGATTGCGGGAAGATAACGGCCCGCGTCTTCCCAGGTCGTTAA # Right flank : CTGCCCAGTCGCCGGAGCGACCTTCAGGTGTTGTGAGCCCCGCCATGCGGAGGTCAAATGGCGGTACGGAATTCGCCTGCTTTCTTGGTCGAGCCTGTTCGCCAGGGTGTTCGTCTAAGCGTGCGAACAGGGTGGATGGCACTGACAGGGCAGGTCAGAGTGGGTGCAGGGTGTTCGTTCTGACGCCCCGACTTATAGCGTCTTGCTACTCATTCACCGGGTGGGGGGAGGGCTGGGGGCGCGAGGTTCTCACCGCTCGGGTGTCCAACCCGGTGGGTGCGGGTGGCTTCTTTGGAGGGTGAAGGGGACTTCATCCGAGGAAGGGGCGTACCCATGTGGGCGTGGGACGAGGACAACGGCTGGTGCCTGGGTGGTGGGGAGCGCTGGTGCTCCGCGAAGGCGGGTCACGGCCAGGGCCGGTGCCGTCGGGTGAAGGAGCCCGTGGTGCCGGTGGCGGGCCAGCGGGAGCGTCAGATGTTGCTGACCGACCTGCGGGCGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCGCGCACGCGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 7 6373133-6372981 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017965.1 Nocardiopsis dassonvillei strain NOCA502F chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6373132 30 100.0 31 .............................. CCGACGGGTTACTGATGAGCTTGGCGCGCTG 6373071 30 96.7 31 .............................T CCGCGTCCGGCGCGGTGAGCTGGGTGGGCAG 6373010 30 93.3 0 ..G.........................A. | ========== ====== ====== ====== ============================== =============================== ================== 3 30 96.7 32 GTTCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : AGCCGGTCGGTGTCCTCCTGGCCGTACTCCGCGATCCGCTCCCGGTCGAAGCCCTCCAGGGCCCGCCGGTAGTTCTCCCGCTTGTTGAGCACGGTGGACCAGGACAACCCGGCCTGCGCGCCCTCCAGGACGAGCATCTCGAACAGGTGCGCGTCGTCGCGGGAGGGCCTGCCCCACTCGTGGTCGTGGTAGTCCCGCATCAGCTCGGAGGACCCCCGTGCCCAGGCACAGCGCTGGTCGGACATGGCAGCTCCTCGGGGCCGGCGGCGGTGGTCGCCTCCATGGTGCCGCAGGTCGGAGACAGTCCGGACGCGACCTCCGGTCGGGGTGCGTTGCGCAGGTGTCTCGCTGGTCGCGGTCCTGATCAGTAGGGCGAGTGCGCCGGTCCTGTGTGTGAAACCATGGGATGGTTCGGACTTGGCTCTGTGGGTGAAATGCCTGTTTCTCGGGAAGTTGGAAATTCGGCTGCTTGTCGCTGGTAATTTCCCAGGTCAGTGACT # Right flank : TGAGCAGGTTTTGCAGGAACTGAGAAGGGGCCGCCAGCGGAGAACGCTGGCGGCCCCTTTACGCGTGTTACCGGGAACGAACGCTGGTGAGGAACGCTGCCCACTCGGCTGAGGGCGCCTCCAGGTGACCGAGGTGACGGTTCTGCGTGTCACGGACGGCGGCACCGGTGCCGGTGTCCGCGACCTCGACGCAGTTGCCGCCGCTGGGCTGGCTGTAGCTCGACTTACGGAAGTTCAACAGGGTGGGAACTGAGGTCATGGTCTTCTACTCGATCATCTGTCGAAGGTGGTCGATCGTCTCGCCGGGACGGAGAGCGGCCAGGCGTAGGTGGTTCATCAGGTTTCTGTAGCGGGCGACCTCGTCGGGCTCCTCCAAGTAGATTCCATCGGTGTCCGTTTCCAAATAGACCACCGTGGGGTCGACCGATTCGGGGAACTCCAAGATGACGAAGGGACCTCCGCTTCCCGCGTTGAGCTGGGACGCGCGTGTCATCTGGAGG # Questionable array : NO Score: 4.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //