Array 1 968848-969775 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP048051.1 Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    968848	    28	 100.0	    32	............................	AAATCGACGTTTGCGCTGACGTAAGTCCAGCT	
    968908	    28	 100.0	    32	............................	AGGAATCCCGGCCCGCGATGCGGACAACCGGC	
    968968	    28	 100.0	    32	............................	ACGGCCCCCGACAACGACATGCGGGCCAGGCT	
    969028	    28	 100.0	    32	............................	AGACGAAATGGACATTTGAGGATCTGCAGCAT	
    969088	    28	 100.0	    32	............................	AGGCTGCGCGGGCGGTTCCTGGTGCACGCCGC	
    969148	    28	 100.0	    32	............................	AACAAGCGGCGCCGTAGCCGCTACGTCACGAG	
    969208	    28	 100.0	    32	............................	AGGGGATCAGGGTGTAGTTGTCGGGCATGCCC	
    969268	    28	 100.0	    32	............................	TCTCGAAATAGCAACACAGCACGGAGCGCTGC	
    969328	    28	 100.0	    32	............................	ACGAAGGCCAGTACCACGCCGGCCACTACCGA	
    969388	    28	 100.0	    32	............................	ATGATGTCGCTAGCGTCATTGTCGATGTGGAA	
    969448	    28	 100.0	    32	............................	CTACTGCTGGCCGAGGCCGGCGAAACCTTCAT	
    969508	    28	  96.4	    32	...........A................	GCCAACCTGGCCGAGCTGTCGGCCCGCTATGT	
    969568	    28	  96.4	    32	...........A................	TGCCCCTGCACTGAGTTTGCTACGAGTGGTGC	
    969628	    28	  96.4	    32	...........A................	ATCTGCGCTTCGCGGCCAGCGTTGTAGGACTG	
    969688	    28	  92.9	    32	...........A..........C.....	AGCCGGGCTTTTTGGTTTCTGCAATTTGGCTA	
    969748	    28	  67.9	     0	.C.........C.C.......CC.AGCG	|                               	
==========	======	======	======	============================	================================	==================
        16	    28	  96.9	    32	GTTCACTGCCGGATAGGCAGCTTAGAAA	                                	       

# Left flank :   AAGGCTCGTTGCTCGCTGCCTTGAAACCCACCGCCGCAGGTCCTGCGGGTAACGATTCGCTCTTCACCGTCCGCCCCGGCATCAGCGCCGAAGAAGCGTTGCTTCACGTTTCCATGCTGCTCAAGTCCGCCGAGGAGGTCTCCGACGAAATCACCGAACACGCCAGCGGTATCGAGCGTGGCCTGATCTGGTCGCTGGTGCATTCCGTGGAGATGGCGCGCGGTGTGGTGGATGCCTTGCTCGACGGTAATCGTCTCTGATCGACAACGGCCCGCTGGCCGCGATCCTCCTTGAGATTCGCGGCTGGGCGGGCCAGCCAAAACGGATTCATGGCGCTAGTCTGAGCGCCGGTGTTCTGTCCCTGACGCTGACCCTTTTTTCCGAACGGATTCCGGCCCTATGTAAATCAAACACTTACAAAGGTCTCTAGAAAGAGGAGTAAATATGGTGTCCAGCATGATTTCTCTTTGAAATCATGGCGCTATTGGGATATCTGTCTA
# Right flank :  GTTAATCCATAGCATCAGTCCGCGTTGGGAGATAACACCGCGACCCAGTTCCCAATCTCACTCCACAACCATGCCACCTACCAATCCCACCCCTTGTCATATCCCCTTCATCGCCGCCTACTAAGGTTTGCTTTTGACATTAAGTCAGGGAGCAACCATGAGCGATTTCACTCTCGGTCGGCGGCGTTTGATTCAGGTGGCGGGGGCAGGGCTGTTGCTGCCGGGGTTGGCGCCGGCGGTGATTGCCTCGGGCAAGGACCGGCCGAAGATGGTCGATGGCGTGCAGTCCGGGGATCTGCTGGGCGATCGGGCGATGGTCTGGAGCCGTACCGACCGGCCGGCGCGGATGGTGGTGGAGTGGGATACCCGCAGCCTGTTCAGCAACCCGCGCAAGTTTGTCTCCCCCCTGGCCGATGCCCGCACTGACTTCACCGCGCGGGTCGAGTTGGGCGGGTTGCCCACCGACCAGGCGATTTTTTATCGGGTGTATTTCGAGGACG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGGATAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGCCGAATAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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