Array 1 67-694 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LVJJ01000025.1 Mycobacterium tuberculosis strain B9741 contig00025, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                                     	Insertion/Deletion
==========	======	======	======	===========================	====================================================	==================
        67	    27	 100.0	    52	...........................	TCGAAATCCAGCACCACATCCGCAGCTGCGGCATGCTCCCGAAGTCGTCAGA	
       146	    27	 100.0	    45	...........................	GCGAGGAACCGTCCCACCTGGGCCTGCCCCCAGCGGGTCGTCAGA       	
       218	    27	 100.0	    48	...........................	TCAATAACACGTTTTTTTGAGCGTGGCGCGGTTGAGAGTGTCGTCAGA    	
       293	    27	 100.0	    48	...........................	ACGGAAACGCAGCACCAGCCTGACAATCTTATTCTCGCGTCGTCAGAC    	
       368	    27	  96.3	    47	..A........................	ATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCAGGTCGTCAGAC     	
       442	    27	  96.3	    49	..A........................	GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCATGTCCTCAGA   	
       518	    27	 100.0	    49	...........................	ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCAGTCGTCAGA   	
       594	    27	  96.3	    47	.........A.................	TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGAGTCGTCAGA     	
       668	    27	 100.0	     0	...........................	|                                                   	
==========	======	======	======	===========================	====================================================	==================
         9	    27	  98.8	    48	CCCAAAACCCCGAGAGGGGACGGAAAC	                                                    	       

# Left flank :   GAGAGGGGACGGAAACCTGCATCCGGAAAGTCCGTACGCTCGAAACGCTTCCAACGTGTCGTCAGAC
# Right flank :  CTACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGA

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   CCAAAAACCCCGAGAGGGGACGGAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,0] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.70,-6.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.15,0   Confidence: HIGH] 

# Array family : NA
//