Array 1 2262845-2265578 **** Predicted by CRISPRDetect 2.4 *** >NC_010816.1 Bifidobacterium longum DJO10A, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 2262845 36 100.0 28 .................................... AGGCTTCCAGCAAGCCCTCGATCGTGGT 2262909 36 100.0 28 .................................... GCACTCAGGAATATGGCACCGCAATCCC 2262973 36 100.0 28 .................................... TATAAGGCAAGCGCCCAGACTTGGGTGT 2263037 36 100.0 29 .................................... GGAGACATTGAAGGCCTTCGCACTGTTCA 2263102 36 100.0 28 .................................... AACCTGTTGGCCTGGTCCCAGTCGGCCG 2263166 36 100.0 28 .................................... ATGCTAACTATACACCTTCACTGCCATG 2263230 36 100.0 28 .................................... AGGAATGATTATGGCTATCATCATGCAC 2263294 36 100.0 28 .................................... TAAATAGACTTTATGACACTGCTGCAGC 2263358 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 2263422 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 2263487 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 2263551 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 2263615 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 2263679 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 2263744 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 2263809 36 100.0 28 .................................... GCCAACGGCGCGTACACCGGCAACTTCA 2263873 36 100.0 28 .................................... AAGAAGACCGCGACTATCGGCTACCAGG 2263937 36 100.0 29 .................................... GTGGGAATCCTGTTGAAGTGGGGTGAGGA 2264002 36 100.0 28 .................................... AGGAGGTTCAACGCAAGTATTTCACGGC 2264066 36 100.0 28 .................................... AGTCATTTGGTGTGCCTTTCACGATGAT 2264130 36 100.0 28 .................................... TTGCATACGATGTCGAATATCCCCTCTC 2264194 36 100.0 28 .................................... TGTCCTGCATTTCGTGCAAGACCGCTTC 2264258 36 100.0 28 .................................... TGTACGCTGACGAGTTTCCTGTTGCTCA 2264322 36 100.0 28 .................................... CGGCCCAACGGAGGTAGGTGCTGCGATG 2264386 36 100.0 28 .................................... CCAGTTCGACGCGTAGGCGCGAGTGTCC 2264450 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 2264515 36 100.0 28 .................................... CGTAAACCTTGTTAAACAAGTTGTCAAA 2264579 36 100.0 28 .................................... CTGTGGCTTCTTCACCTTCGGCACCTTC 2264643 36 100.0 28 .................................... TTTTCTCCAGCACACGGACGTAATCGGC 2264707 36 100.0 29 .................................... CCAAGTGTGGGCCGAACTCAACAACTAAG 2264772 36 100.0 28 .................................... TCAATTCCGCGTCAACTTTCCAGCACAT 2264836 36 100.0 29 .................................... CGCCTCGCCGCCGCACGAGAACGAGTCAA 2264901 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 2264965 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 2265030 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 2265094 36 100.0 28 .................................... CGGGTAACAAGGTGGACATGCTCATTGA 2265158 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 2265223 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 2265287 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 2265351 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 2265415 36 100.0 28 .................................... TCGTCGATGTGCTCCAAGAGGTTTGGTG 2265479 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 2265543 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 43 36 99.7 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCGGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //