Array 1 144-2084 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVTS01000014.1 Marinilabilia salmonicolor strain MSL42 Ga0139029_114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 144 46 100.0 30 .............................................. GTGTAATTGTGTTGAGAAACGGCGAACAGA 220 46 100.0 30 .............................................. AATCAACGGTAAAACAACAGGAGTAACAAT 296 46 100.0 30 .............................................. AAAACATCTATTTCTCCAATGTAGATAGAG 372 46 100.0 29 .............................................. TAAAGGAACTGAACTAATTCATTTGTAAA 447 46 100.0 29 .............................................. AAAAGTCGTTAGGGCTGCTTGAATATTGG 522 46 100.0 30 .............................................. CACCAGTAAACTGATGTTTCGTGATTTGAA 598 46 100.0 30 .............................................. ACCTAATCGCGCTAAATTCTCCTGAAGCTC 674 46 100.0 30 .............................................. TAATACGGTTGATGCACTTTCAGTGTTTAA 750 46 100.0 29 .............................................. AACTTGGGTATTGCGGTCAACGTTCCAGC 825 46 100.0 30 .............................................. TACATCATTAAGGCTAATTTTAAAGTCCTG 901 46 100.0 30 .............................................. CAACTCATATCTGTGGGCTGAAGATTTGAT 977 46 100.0 30 .............................................. TCATGGGCGATGCATTGCGTCCGGCAACTT 1053 46 100.0 30 .............................................. AATTAATAGCCGACAAAGAAGCTCGCAACT 1129 46 100.0 30 .............................................. GCACACATTTGGCAACCGGATACCCCAGGG 1205 46 100.0 30 .............................................. GGGCCGTTGCCAGTGCCATAAAAAAAGATG 1281 46 100.0 30 .............................................. CGGCACAGGCAGCGGTATAAAAAACAAAAG 1357 46 100.0 29 .............................................. AGGCTTTGGGCCACTTGCAAAAACTTCTT 1432 46 100.0 29 .............................................. TACTGCAAATGACTTTATTATTATGCGTG 1507 46 100.0 30 .............................................. ACACATTGCAAACACGCCAATGAATAATTG 1583 46 100.0 30 .............................................. AAGAACTTGAAAAGACTCTCAAGGACTTGA 1659 46 100.0 30 .............................................. CATGACCGGTTAAGGGCATAAGGGAAAGAA 1735 46 100.0 30 .............................................. AGGTCGGCATCTTTATCCTGAACCGTGGCG 1811 46 100.0 30 .............................................. ACCAATTCCGTGAGTTTTGCATGAGTGTGC 1887 46 100.0 30 .............................................. CAAAGCCAATCAGTATGTGACGGTGCGACA 1963 46 100.0 30 .............................................. GCGAGACGGGAGAGATGCAGCACGAGAATA 2039 46 93.5 0 ...............A............................CA | ========== ====== ====== ====== ============================================== ============================== ================== 26 46 99.8 30 GCTGTCAGCGCTACTGCAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : ATCCACATCACACCTGCCGAAAATTTCAAAGAACTTTTGCCGCAATTTATTGATAAAAAATTACTCCAGGAATAAGGTTTTGCTGGGGTGGATACTTTTGAAAGCAATTCACAACAGTACCGTTTTAGCCTCATTTCTCGCCGG # Right flank : AGGTTAAAATTAGTAGTGAAACCGTTTCCACCTTACTTCAAGGCTGTTTCATCGCAGACCACAAAAAAAGGCTCCACTTGCGTGAAGCCTTTTTGATGTTACTTTCCTTATTTTTATTTCGATGTTTTCAGGCCTTTTATAAATCCGTAATAGGCCGGTTTGGGATTCATGTTTTCGTCATAGATACATGGCCAGTCATTCAGGTCAAAGAATGACGGAATCCAGGAGTGTTTGTCGCTAAATCCCCACACGGTCATTCCATAACGTTGTTGTTTCGGGACATTCCGAATGTATGCTTCTGCCAGCCATTGGTATTTGTCAGCCTGAGCCTGAAGCATTTCTTCGGTCAGTTCGTCGTAAATTTGTATTCCGCCACCGGGGGTGTCGTCATGTTTATTGAAAATAATGTCAATCTCGGAAAGATGAATCTGCAAGCCGGTTTCTGCTGCTTTTTTGAGTGCGTATTCGATGGTTTTTTCGTCTGTATCCATGCGGATATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTCAGCGCTACTGCAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.70%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 307911-308639 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVTS01000005.1 Marinilabilia salmonicolor strain MSL42 Ga0139029_105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 307911 46 100.0 30 .............................................. AATAACACACTTTCAACTATATTGGTTTGT 307987 46 100.0 30 .............................................. ATGAACACAAGGGTAACAACAATAACAAAA 308063 46 100.0 30 .............................................. TCTTACGGGGAAGATATGTTTAAATTTTCT 308139 46 100.0 30 .............................................. AGAATTGGTAATTTGGTTAAATCCAAATAC 308215 46 100.0 30 .............................................. TATTGTTGTTCTGTGCCCTCAGCCATGAGT 308291 46 100.0 30 .............................................. AAAAAGAGATTAATAACAAAGAGGAACTGC 308367 46 100.0 30 .............................................. GTTCTTTGACTGGTCAAATATCTAACCTGG 308443 46 100.0 30 .............................................. AAGAATTACTTTATTAGTCAACTCCACTCC 308519 46 100.0 30 .............................................. GTCACGGGCAATGTATATGTCCGTGATTTT 308595 45 89.1 0 ...................................-T..C...CC. | ========== ====== ====== ====== ============================================== ============================== ================== 10 46 98.9 30 GCTGTCAGCGCTACTGCAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : TTATAGTTGTTTTGAGGGCAGTAGCCGAAGAATTTCTTATCCGCAATTTGAAAATTGATATGAATCGCCTTAACGAATATAGAGTTATGTGGGTTATGGTTCTTTTTGATTTGCCGACAGAAACGAAAAAAGACCGTAAGATATACAGCACTTTCCGGAAGAAAATGCTGAATGACGGTTTTGTGATGTTCCAGTTTTCTATTTATATCCGACATTGTCCCAGCCGGGAAAATGCAGAAGTGCACATGAAGAGGGTGAAAAGTTTTTTGCCTCCCAAAGGGAATGTGGGGATTATGAGAATTACAGACAAACAGTTTGGTGATATGGAGCTGTTTTACGGAAAAGAAATTACCAAAAAGGAAACTCCATATATGCAGTTGGAATTGTTTTAAAATAAAAAAGTCCGGCGAACCGGACTTTTTTATTGAAACTGACAGCTCATTTTTTGATTCTAAATTCGTGAGTAATTTGCTGATGCATAGTCGTTTGTTTCGAGGTCT # Right flank : AGCAATGACATCTTTCCTGGCATGATCCAGACGCCTACCTTTGTCAAAAAAAATCATGCAACACAGAAAATCTTTAAACCAGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTCAGCGCTACTGCAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.70%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //