Array 1 20350-16419 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMHC01000098.1 Acinetobacter baumannii AB_1583-8 AB_1583_8_99, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 20349 29 86.2 31 ....G.......CC..............G ATCGTAATCATGCCGTGATAGATACCGCCTT 20289 29 86.2 31 ....G.......CC..............G CACCCGTGGGGATAGATATCGATCAAGTACG 20229 29 86.2 31 ....G.......CC..............A ACTTCGAGCGCTTGTTCGTACGTTTGGATAT 20169 29 86.2 31 ....G.......CC..............A TTTTATACGTACCTCACAATTACGCCAATCC 20109 29 86.2 31 ....G.......CC..............A CTTTGCAAAGCTGCAAAAGCTTCAACATTAT 20049 29 86.2 31 ....G.......CC..............G TTCTTTTCTGCAATATGTGCCATTAGGTATT 19989 29 86.2 31 ....G.......CC..............A TTTTAGATGAAACAAAAGATAGCAGGATTAT 19929 29 86.2 31 ....G.......CC..............A GACCAAGCGGATTGACCGTATTGATAAATAA 19869 29 89.7 31 ....G.......CC............... TCCGCAATACAAATCACTGGATCAGCCAGGT 19809 29 89.7 31 ....G.......CC............... GAGTCTTTGATTTCCCAAATATTACTTGAAA 19749 29 86.2 33 ....G.......CC..............C CTGAAAAATTTCACTGTGTCCATTTCGTTATTA 19687 29 86.2 31 ....G.......CC..............A TTATCAGATAAGCCTTTTATGAATGATCGTT 19627 29 86.2 31 ....G.......CC..............A TTAGCTATTAGCTTTTTGGCAACAACAACAG 19567 29 86.2 31 ....G.......CC..............A GTTCATGAAAACAGCTTTAAAAAGAAAGCAC 19507 29 89.7 31 ....G.......CC............... CCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 19447 29 89.7 31 ....G.......CC............... TGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 19387 29 89.7 31 ....G.......CC............... GGTACGACAACTACGAAAAGCTGAGCAAAGT 19327 29 89.7 31 ....G.......CC............... CAACTTAAATGGATGCTCCCCGCGGTGAATT 19267 29 86.2 31 ....G.......CC..............G AGTTTAATGCGCTATATGGCGACGAGGATTT 19207 29 86.2 31 ....G.......CC..............C ATGCAATCGCGTTGATTACCGCAGCTTCGAA 19147 29 86.2 31 ....G.......CC..............A TGAGCCGCAACCATACGGTCTATGACTTCCA 19087 29 86.2 31 ....G.......CC..............A TAGCGCCCTGCTCTATGTTGTCACTTCCGAA 19027 29 89.7 31 ....G.......CC............... CCAAGTGAATCGGCTCCTAATGCAAATGACC 18967 29 89.7 31 ....G.......CC............... GAAAACCAATATGCTGCCTAATTGCCATAAG 18907 29 86.2 31 ....A.......CC..............G ATCTGCGTCCATTTGTACTTGCTGCGGGTGC 18847 29 96.6 31 ............................A TATACAGCACCGCTTAGTGCGACGCGGTCAT 18787 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 18727 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 18667 29 96.6 31 ............................A GAAGGCCCGTAATTTAACTGTAAGCCGTGGT 18607 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 18547 29 93.1 31 ......T.....................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 18487 29 100.0 31 ............................. TCAGGGAATTATCGTGAAACTTTCATTGACT 18427 29 100.0 31 ............................. GCACCAGCTGCTGGCTGGTTGAAATCTGCAA 18367 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 18307 29 100.0 31 ............................. GTTTCAAAAGCTACACCATCAAAACCATTGC 18247 29 100.0 31 ............................. ATTTAAGTAATAAGTTTAATAACGACCTAGT 18187 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 18127 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 18067 29 96.6 31 ............................G CCTGCAGACACGGATTTACGCAGCTGATCGA 18007 29 96.6 31 .........................C... AACCAAACTATGTCATCGATCGGAGATTTCA 17947 29 100.0 31 ............................. TAAAATAAATGCCTGTGGTTTTTTCTTAACT 17887 29 96.6 31 ............................A GTTTCCGAAGTTGAATTACACTCGCCAAGTT 17827 29 100.0 31 ............................. AACACAGTGATTTGATTACCTTGAGCAACCC 17767 29 96.6 31 ............................A TCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 17707 29 100.0 31 ............................. CATCCACCTTTGATGAAACGGATCCACGCAA 17647 29 100.0 31 ............................. CTTGTGTGACGGCCTCCACTCCAGATCCCGC 17587 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 17527 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 17467 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 17407 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 17347 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 17287 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 17227 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 17167 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 17107 29 100.0 31 ............................. GCAGCTACTCGACATGTTGGTAGGGCAGATG 17047 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 16987 29 96.6 31 ............................A GATTGAGGCGATTTTTATCGCGGACATTGCC 16927 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 16867 29 100.0 31 ............................. CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 16807 29 96.6 31 A............................ TATTATTAAACGGGAAAAGTATATTCTTGCT 16747 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 16687 29 96.6 31 ............................A TCATCAATAAGTTGGCCTTGATTTAAATAGT 16627 29 96.6 31 ............................A GATACAAACGAGTTCGCATCTCGACCAGAAG 16567 29 96.6 31 ............................A TTATCCAGATAAAACCATATCTACAAAGTGG 16507 29 100.0 31 ............................. CAACCTGAACACAGACATACATGTTCTATTG 16447 29 86.2 0 ...GC...................AT... | ========== ====== ====== ====== ============================= ================================= ================== 66 29 93.9 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 25440-27442 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMHC01000098.1 Acinetobacter baumannii AB_1583-8 AB_1583_8_99, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25440 28 100.0 32 ............................ AATCCAAAGGTGGGCGGGTCTTATCTTTAATA 25500 28 100.0 32 ............................ ACTGAGGAAGGGAAGGATATCATGCGCGAGGC 25560 28 100.0 32 ............................ ATAAAAGAATTGCTCTTGGCTTTTATTACGCT 25620 28 100.0 32 ............................ AATACCTCTAGCCAAGGCGGTTGGAGTGCCCC 25680 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 25740 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 25800 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 25860 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 25920 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 25980 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 26040 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 26100 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 26160 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 26220 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 26280 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 26340 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 26400 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 26460 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 26520 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 26580 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 26640 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 26700 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 26760 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 26820 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 26880 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 26940 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 27000 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 27060 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 27120 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 27180 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 27240 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 27295 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 27355 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 27416 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 34 28 98.3 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //