Array 1 27853-27181 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV786355.1 Enterococcus sp. HMSC29A04 Scaffold350, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 27852 29 96.6 36 ....G........................ CACAGGATTGGTCTTGATGCTTGTTTTGAAACAAAA 27787 29 96.6 35 ....G........................ AATTCTCCATCGATTCGAATATAGCGGGGTTCTCT 27723 29 100.0 36 ............................. GTTGATGTTCCAAATGAGGCATATCATGGAAGCGAT 27658 29 100.0 36 ............................. GCTGCTAGGTCCAACCCTACTTACTCAGCTGTAATT 27593 29 100.0 36 ............................. ACAAAGAGCGGTCTTGATTATTTCCCTCTTGATGTT 27528 29 100.0 35 ............................. ATTTCAAAAACTATAAAAGTGAATGATAGAAACTA 27464 29 96.6 36 ...A......................... ACAGCAGTAGAAGAGAAACTCATTGATATCAAGTTC 27399 29 96.6 35 ...A......................... CAAGTAATTGTTCCAAGGATCGGAATTTTAACAAG 27335 29 96.6 34 ....G........................ GTCATTGCCGTAGAGAAAGTATTTCCTGGGGCTT 27272 28 93.1 36 ......T.-.................... TTCCCTGACGCTTCAACACCTACGCCTAGCCCAGGC 27208 28 79.3 0 ..............C.A..-....G..CG | ========== ====== ====== ====== ============================= ==================================== ================== 11 29 95.9 36 ATCTAAATCTAAAATAGTGGAATGTAAAT # Left flank : AAAAGGCAAATCTTGCTGCTTTTCACTTAACAAACTATATTCTTCTCGAAGTTGAGCAAGTAGATATAGATGATTTAGAAGGAGAGTTGTATGAAGTGTCTGCAGAATGTCGCTACGTTTGGGAAGCGATCCTTGAGAAAGCGACCATACAAGAAAAAGAGACAATGTTTACTTGGTTTAAAAATCAGCTTAAACATTCTAACTATGGGTTAAGTTATAGTGAAATTGAACAAATTTGTGAGGAATATTTTTAAGGGATAGAGTTTATGAGAGGGTAGGAGTGGATTCTGCTGATAAATCAAATATTCATCAAGAATTTCTAGTAAAAAGCTTAGTACAAGTGAACCAATCACAATTAAATTGACGCTATTTTTTTGGGGGATCTGTCGACCTCAAAAAATCAGAAATTTCTGTAGTTGCGACTGCAGCATGAAAATGTTGAATTCTAAGGATTTTCTGTTAAGAATACTGTTATTTTTGTTGAGTGATGATGTAATAAA # Right flank : CAAATTATGTTATCACACAACCAATTCACCCAGAAAATTTCTCCAATTCCAAAGCACTAACCTCATAAAAAATCTACAGCCACCATCGCAAAAACACTTTTACCAGCTGGAGAGTGTTTTTTTTGTCTCTTTATTTATTCCTAAACTCTGAAACTTTCATCCGAAACGTGGGTGATCTTTGCTAAAATTAAGAATAAAACCATTATTTTTATAAGGAGAAGACCGATGCAGGAGAAAATAAAGGTATTGATCATTGATGATGATCAAGAGCTGTGCTCGATTATTGAACGGTATTTGACGCGTGCTGAGTATGAGGCGGCGTTTGCTCATACGGGTGCGGGCGGATTGAAAATGGCCTTAACAGGGGAGTATCACTTGATCGTATTGGATATTATGCTGCCGCAAATTGACGGGTTGAGCATTCTAACAGAGATTCGCAAGGAGAGTGTGGTGCCGGTCTTGATGTTGACAGCAAAGAACGAGGAGGCGGATAAGATTCG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTAAATCTAAAATAGTGGAATGTAAAT # Alternate repeat : ATCTGAATCTAAAATAGTGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 30336-29778 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV786355.1 Enterococcus sp. HMSC29A04 Scaffold350, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 30335 30 100.0 34 .............................. CTGGTAAAAAGAAAGAACGAGCTATCACGATGGA 30271 30 100.0 36 .............................. CCCTATGGAATAGGCTCACTAGAAGAAAAGTAACAC 30205 30 100.0 36 .............................. TCAGTATATTTAAAGGATCGTGATCCCTTTGACCTC 30139 30 100.0 36 .............................. ATTGCTCGCCCAGATGTTAAAAAGGCATTTGGACTT 30073 30 100.0 36 .............................. TTGGCACACGACAGGCGATAGACCTGATGGAGCAAA 30007 30 100.0 37 .............................. GTTAGTTCTCTAACCATTTGATCAATGGTCCACATTT 29940 30 100.0 36 .............................. GATCGAAAACAGTTATTAGCTTTTCAAATTACCCAG 29874 30 100.0 37 .............................. CCCACATGGTCGCTAAAAATACAAACAATATCCCCCG 29807 30 96.7 0 .......C...................... | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 99.6 36 GTTCAAATCTAAAAATAGTGGAATGTAAAT # Left flank : TATGAACCTTTCAAAATTTGGTGGTGAAAATAATGTATGTCATTTTAGTTTATGATATTTCTTTAGAAGAAAAAGGCGCTCGTGTTTTGAACCGAGTATTTAAAATTTGTAAAAAATACCTAAGTCATGTGCAAAAATCCGTGTTTGAAGGGGAGATCACTCCTGCAAAGCTGAAAAAATTAGAACAAGAACTAAAAGAGTACGTTCGCGAAGACTTGGATTCAGTTTTAATCTTCAAAAATTCAAATAAGAAGTGGTTAAAAAAGGAATACATCGGAATTGACGGATCAGAACTAGTTTCGAATTTCTTTTAAGTTTTAAATCTGTCGATAGAGAATACCTTAAAAAACCGGTAGTTACGACAGACGATAGAGAATGTTGTGAATATAAGGTTCTTTTTGTTATCCAGTGTTATTTAATTTTAAAAAGGAAGTCATTTCTATGAGGTCGACAGAAATGAGTGAAAGAAGCCCTCTATTTCAATGTATAATAGTTGTGGG # Right flank : GAGCGCCGAAGACGAGTACCAACTTGATCCGCCATTGTTCAAATCTAAAAATAGTGGAATGTAAATNNNNNNNNNNNNNNNNNNNNTGTTCAAATCTAAAAATAGTGGAATGTAAATGGCGTTGAGTACGAAATGGACATGACTGTAATGGGTTCAAATCTAAAAATAGTGGAATGTAAATTTCATATCCCGAAGGTCATGCTCTGCTTCTCTCATTGTTCAAATCTAAAAATAGTGGATATAATTTTGGGTAACTAGAAAAATTCCAACTGCGAGTTAGATATCTAAAATAAGAAATTAATTTAAGAGGTAATTGAATATAAAAAAGCATAGTACATTATTGAATTTAAGAGGGTGAGAAGAGATGAAAATCTATACGATTCAACGGAGAGATTTTCTGACATATACTGATTCACAAGGATTTATAATTCCTAAAAGAGATCCAGAATACTCTATCTTTACGGATGACGAAGAAGGGGAAAATTGTCTGTGAGCATTAG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATCTAAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //