Array 1 3219427-3218560 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059414.1 Enterobacter hormaechei strain ENCL48212 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3219426 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 3219366 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 3219306 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 3219246 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 3219186 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 3219126 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 3219066 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 3219006 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 3218946 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 3218886 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 3218826 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 3218766 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 3218706 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 3218646 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 3218586 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3230371-3228903 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059414.1 Enterobacter hormaechei strain ENCL48212 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3230370 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 3230310 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 3230250 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 3230190 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 3230130 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 3230070 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 3230010 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 3229950 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 3229890 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 3229830 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 3229770 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 3229710 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 3229650 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 3229590 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 3229530 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 3229470 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 3229410 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 3229350 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 3229290 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 3229230 28 100.0 32 ............................ CATAACGACACCTTTTAAAATCGTTAATTAAC 3229170 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 3229110 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 3229050 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 3228990 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 3228930 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //